Gene sequences

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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os01t0631900-00
CDS Infomation	cds chromosome:IRGSP-1.0:1:25291327:25298088:1 gene:Os01g0631900 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to aspartic proteinase oryzasin-1. (Os01t0631900-00)
Sequence	ATGGGTCACACAGCCAGTCGGATATGTACCCTTCTCTCGATCCTCTTCGTTTCTTGTATG CTTGCATCTGCTGCCAATGATGGACTGATCCGCATCGCGCTGAAGAAGAGACCGATCATG GAGAGCATCTACGGTGAACTAGTTCCCAAGAGTGGTACAGTGGACCACGAGGTTGCACTT GGGTATTCTGGCGTCAGGATGAATTCGGCAGATGAGGGATTCTACGATCCGGTCACGGAA GCCATTAACCATGTTCGTGTGCATCAGCAAAGAATGCTCAGGGACATAGAGGCTGCAGCC ATGGAAGGGAGGCTCAAGCATTTCTGGAGTTACAGAGGGTTCAGAGAAAGGGGTAGCCTG AAAAATGGCACTCAGAATCATCCTCTAGCGCTGAAGAACTTTCTGAACGCTCAGTATTTT GGGGAGATCGGAGTTGGCTGCCCACCGCAGAATTTTACGGTGGTCTTTGACACCGGGAGC TCCAACCTCTGGGTCCCTTCCGCCAAGTGCGTTTTTTCGCTTGCCTGTTACTTCCATCGG AAGTATGAATCAAGAAGTTCCAGTACTTACATGGAGAATGGAACACCTGCTTCCATTCAC TATGGAACAGGATCTATTCATGGTTATTACAGTCAAGATCAAGTTACCATTGGTGATCTA GTTGTCAATAATCAGGAATTCATTGAAGCTACTCATGAGCCTGGTCTTACGTTTCTAGCA GCAAAATTTGATGGCATCCTTGGACTTGGATTTAAGGAAATTTCAGTTGAAGGTGCAGAC CCAGTCTGGTACAATATGATTCAACAAAGCCTTGTGACTGACAAGGTATTTTCCTTTTGG TTAAATCGAAATGCAAACGATATCAATGGGGGTGAGATTGTGTTTGGAGGTGCTGACGAG AGCCATTACAAAGGTGATCATACATACACCCGAGTTACTCGGAAAGCTTATTGGCAGTTT GAAATGGGAGATTTTCTTATTGGAGGCAGGAGCACTGGAATTTGTGTTGACGGTTGTGCT GTCATAGCAGACTCAGGAACTTCGTTGATTGCTGGTCCTATAGCTGCTATTGCGCAGATC CATGCACATATTGGAGCCACCGGTGTGGCAAACGAAGAGTGCAAACAAGTTGTTGCTAGA CATGGGCATGAAATGCTAGAGTTGCTGCAAGATAAGACACCACCAGCACAAGTGTGTTCC AAAATTGGGCTCTGCAAATCCGATGGAGCGCATGGAATTAGCGATGGCATTGAGAGTGTG CTGGGTGAGACGCACAAATCTGCAGACGAAGTTTCTGACGCTACGTGTAATGCATGTGAG ATGGCAGTTACATGGATGCAGAGCGAATTTGTTCAGAACCATACAAAGGAGGGCAAGTTG GAGTATGCTAATCAGCTCTGTGGCAACATGCCTAGCCCAGTAGGATCATATGTGGACTGC AGACACATCGGTCACTTGCCGAACGTCGCATTCAGCATAGGTGGAAGAGCATTTGAGCTG ACACCGGAGCAGTACATTCTCAAATTTGGAGAGGGATTCCTGGCTCATTGTATGAGTGGA TTCACGGCTTTAGACATTCCTCCTCCAATAGGTCCTCTCTGGATATTAGGCGATGTGTTT ATGGGGGCTTATCACACCATCTTTGACTATGGCAAAATGAGGGTTGGATTTGCAGATTCA GCGTGA

Peptide Sequence

PEP ID	Os01t0631900-00
PEP Infomation	pep chromosome:IRGSP-1.0:1:25291327:25298088:1 gene:Os01g0631900 transcript:Os01t0631900-00 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to aspartic proteinase oryzasin-1. (Os01t0631900-00)
Sequence	MGHTASRICTLLSILFVSCMLASAANDGLIRIALKKRPIMESIYGELVPKSGTVDHEVAL GYSGVRMNSADEGFYDPVTEAINHVRVHQQRMLRDIEAAAMEGRLKHFWSYRGFRERGSL KNGTQNHPLALKNFLNAQYFGEIGVGCPPQNFTVVFDTGSSNLWVPSAKCVFSLACYFHR KYESRSSSTYMENGTPASIHYGTGSIHGYYSQDQVTIGDLVVNNQEFIEATHEPGLTFLA AKFDGILGLGFKEISVEGADPVWYNMIQQSLVTDKVFSFWLNRNANDINGGEIVFGGADE SHYKGDHTYTRVTRKAYWQFEMGDFLIGGRSTGICVDGCAVIADSGTSLIAGPIAAIAQI HAHIGATGVANEECKQVVARHGHEMLELLQDKTPPAQVCSKIGLCKSDGAHGISDGIESV LGETHKSADEVSDATCNACEMAVTWMQSEFVQNHTKEGKLEYANQLCGNMPSPVGSYVDC RHIGHLPNVAFSIGGRAFELTPEQYILKFGEGFLAHCMSGFTALDIPPPIGPLWILGDVF MGAYHTIFDYGKMRVGFADSA

Transcript Sequence

Transcript ID	Os01t0631900-00
Transcript Infomation	cdna chromosome:IRGSP-1.0:1:25291327:25298088:1 gene:Os01g0631900 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to aspartic proteinase oryzasin-1. (Os01t0631900-00)
Sequence	TGCTGATCAGAATGGGTCACACAGCCAGTCGGATATGTACCCTTCTCTCGATCCTCTTCG TTTCTTGTATGCTTGCATCTGCTGCCAATGATGGACTGATCCGCATCGCGCTGAAGAAGA GACCGATCATGGAGAGCATCTACGGTGAACTAGTTCCCAAGAGTGGTACAGTGGACCACG AGGTTGCACTTGGGTATTCTGGCGTCAGGATGAATTCGGCAGATGAGGGATTCTACGATC CGGTCACGGAAGCCATTAACCATGTTCGTGTGCATCAGCAAAGAATGCTCAGGGACATAG AGGCTGCAGCCATGGAAGGGAGGCTCAAGCATTTCTGGAGTTACAGAGGGTTCAGAGAAA GGGGTAGCCTGAAAAATGGCACTCAGAATCATCCTCTAGCGCTGAAGAACTTTCTGAACG CTCAGTATTTTGGGGAGATCGGAGTTGGCTGCCCACCGCAGAATTTTACGGTGGTCTTTG ACACCGGGAGCTCCAACCTCTGGGTCCCTTCCGCCAAGTGCGTTTTTTCGCTTGCCTGTT ACTTCCATCGGAAGTATGAATCAAGAAGTTCCAGTACTTACATGGAGAATGGAACACCTG CTTCCATTCACTATGGAACAGGATCTATTCATGGTTATTACAGTCAAGATCAAGTTACCA TTGGTGATCTAGTTGTCAATAATCAGGAATTCATTGAAGCTACTCATGAGCCTGGTCTTA CGTTTCTAGCAGCAAAATTTGATGGCATCCTTGGACTTGGATTTAAGGAAATTTCAGTTG AAGGTGCAGACCCAGTCTGGTACAATATGATTCAACAAAGCCTTGTGACTGACAAGGTAT TTTCCTTTTGGTTAAATCGAAATGCAAACGATATCAATGGGGGTGAGATTGTGTTTGGAG GTGCTGACGAGAGCCATTACAAAGGTGATCATACATACACCCGAGTTACTCGGAAAGCTT ATTGGCAGTTTGAAATGGGAGATTTTCTTATTGGAGGCAGGAGCACTGGAATTTGTGTTG ACGGTTGTGCTGTCATAGCAGACTCAGGAACTTCGTTGATTGCTGGTCCTATAGCTGCTA TTGCGCAGATCCATGCACATATTGGAGCCACCGGTGTGGCAAACGAAGAGTGCAAACAAG TTGTTGCTAGACATGGGCATGAAATGCTAGAGTTGCTGCAAGATAAGACACCACCAGCAC AAGTGTGTTCCAAAATTGGGCTCTGCAAATCCGATGGAGCGCATGGAATTAGCGATGGCA TTGAGAGTGTGCTGGGTGAGACGCACAAATCTGCAGACGAAGTTTCTGACGCTACGTGTA ATGCATGTGAGATGGCAGTTACATGGATGCAGAGCGAATTTGTTCAGAACCATACAAAGG AGGGCAAGTTGGAGTATGCTAATCAGCTCTGTGGCAACATGCCTAGCCCAGTAGGATCAT ATGTGGACTGCAGACACATCGGTCACTTGCCGAACGTCGCATTCAGCATAGGTGGAAGAG CATTTGAGCTGACACCGGAGCAGTACATTCTCAAATTTGGAGAGGGATTCCTGGCTCATT GTATGAGTGGATTCACGGCTTTAGACATTCCTCCTCCAATAGGTCCTCTCTGGATATTAG GCGATGTGTTTATGGGGGCTTATCACACCATCTTTGACTATGGCAAAATGAGGGTTGGAT TTGCAGATTCAGCGTGAAAGACTAGCATTTCAC