Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os01t0631100-01
CDS Infomation	cds chromosome:IRGSP-1.0:1:25226874:25233773:1 gene:Os01g0631100 gene_biotype:protein_coding transcript_biotype:protein_coding description:Cas1p-like family protein. (Os01t0631100-01);Similar to predicted protein. (Os01t0631100-02)
Sequence	ATGGAGGTCTTCGGCCCCGTCACCGCCGGCCAGGTGTCATTTTTGCTTGGTCTATTCCCT GTTCTCATTGCATGGATCTATTCAGAAGTCCTGGAGTACAGAAAATCTTCGTCTATGAAA GTTCACTCCGATTCCAATTTGGAGAATGGAACTGTCAAAGAAGATGATAAAACGGTATTG CTGGAAGGAGGCCTGTCAAAGTCACCATCTACAAAGTTTCGGATCAATTCTACAAAAGCA AACCTCATAAGGTTTATAACAATGGATGAATCTTTCCTTCTGGAAAATCGTGCTGTACTG AGAGCAATGGCAGAATTTGGCATCGTTCTGGTTTATTTCTACATTTGTGATCGGACAAAC ATATTTCCAGAAAGCAAGAAGAGTTACAACCGTGATCTGTTTCTGTTTTTATACATTCTT CTCATCATAGCATCAGCATTAACATCACTTAAGAAGCACCATGACAAATCAGCATTCTCA GGGAAATCTATACTCTATCTTAATCGCCATCAAACAGAGGAATGGAAAGGTTGGATGCAG GTCCTGTTTTTAATGTACCACTATTTTGCCGCCACTGAAATATACAATGCAATTCGTGTT TTCATTGCTGCCTATGTCTGGATGACTGGATTTGGGAACTTCTCATACTATTATATTAAG AAAGACTTTAGTCTTGCCAGATTTGCTCAGATGATGTGGAGACTTAATTTTTTTGTGGCT TTCTGCTGCATTGTCCTTGACAATGATTACATGCTCTATTACATATGCCCAATGCACACT TTGTTTACTCTTATGGTATATGGGTCCCTTGGTCTCTTTAATAAGTATAATGAGATACCT TCAGTGATGGCAATGAAGATTGTCAGCTGCTTCTTAGCAGTGATCTTGATATGGGAAATT CCTGGTGTATTTGAACTGCTGTGGAGTCCATTTACATTTCTGCTAGGCTACAAGGACCCA GAGCCTTCAAAAGCAAACTTACCACTGTTGCATGAGTGGCATTTCCGATCTGGCCTTGAT CGTTATATATGGATTATTGGAATGATCTATGCCTACTTCCATCCAAATGTTGAAAGATGG ATGGAAAAGCTTGAAGAATCTGAAACTAAGGTTAGGTTGTCAATTAAGGGAACCATCATT AGTATTTCCTTGGTGGCTGGCTATTTGTGGTACGAGTATATTTACAAACTAGACAAAATT ACATACAACAAGTACCATCCGTACACATCATGGATTCCTATCACTGTTTATATCTCCCTA AGGAATTGCACTCAGCAGCTTAGAAACGTCTCTTTAACTCTTTTTGCGTGGCTTGGCAAG ATTACTCTGGAGACCTATATCTCTCAGATCCACATTTGGCTCAGGTCTAACATGCCTAAC GGGCAGCCAAAATGGCTTCTCTCTTTCATTCCGGGTTACCCACTGCTCAACTTTATGCTT GCTACAGCAATATATCTTCTTATATCATACAGAGTGTTTGAGCTGACAGGTGTGTTGAAG TCAGCTTTTATTCCCAGCAGAGATAACAATCGTCTATATCAAAATTTTGTTGCCGGGATT GCCATCTCCGTATGTCTGTATTTCCTCTCAATTGTACTTCTTAAGATTCCCATTGTATAG

Peptide Sequence

PEP ID	Os01t0631100-01
PEP Infomation	pep chromosome:IRGSP-1.0:1:25226874:25233773:1 gene:Os01g0631100 transcript:Os01t0631100-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Cas1p-like family protein. (Os01t0631100-01);Similar to predicted protein. (Os01t0631100-02)
Sequence	MEVFGPVTAGQVSFLLGLFPVLIAWIYSEVLEYRKSSSMKVHSDSNLENGTVKEDDKTVL LEGGLSKSPSTKFRINSTKANLIRFITMDESFLLENRAVLRAMAEFGIVLVYFYICDRTN IFPESKKSYNRDLFLFLYILLIIASALTSLKKHHDKSAFSGKSILYLNRHQTEEWKGWMQ VLFLMYHYFAATEIYNAIRVFIAAYVWMTGFGNFSYYYIKKDFSLARFAQMMWRLNFFVA FCCIVLDNDYMLYYICPMHTLFTLMVYGSLGLFNKYNEIPSVMAMKIVSCFLAVILIWEI PGVFELLWSPFTFLLGYKDPEPSKANLPLLHEWHFRSGLDRYIWIIGMIYAYFHPNVERW MEKLEESETKVRLSIKGTIISISLVAGYLWYEYIYKLDKITYNKYHPYTSWIPITVYISL RNCTQQLRNVSLTLFAWLGKITLETYISQIHIWLRSNMPNGQPKWLLSFIPGYPLLNFML ATAIYLLISYRVFELTGVLKSAFIPSRDNNRLYQNFVAGIAISVCLYFLSIVLLKIPIV

Transcript Sequence

Transcript ID	Os01t0631100-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:1:25226874:25233773:1 gene:Os01g0631100 gene_biotype:protein_coding transcript_biotype:protein_coding description:Cas1p-like family protein. (Os01t0631100-01);Similar to predicted protein. (Os01t0631100-02)
Sequence	GAGTCTGAAACTGAAGGAAACCAAACCAAAAAAAACTCCAACCATCGTTTGCCTCCCTCG CTCTGACCTCCTCTCCCTCTCCTCCGCGGCCGGCCCCGCCGCGAGCCCGCCACCCTCCGG CCTCTGACGGCGAGCGACCACCCACCACCTCCCGCTTGCTTCAGATCTCCTCCTCCCTCC CTCCCGCCGGCCGGGCCCCGCGACCGCCCGCCCGCTCGCTTCCCCTCCCGCCAACGCCGC ATATAACACCCCCTCCCTCCCTTACCGCTCACCGAACGCGCGGCGTGATCCCCTCCCTCC CTCCCTCCCTCCGCTGCGATCCCGGCCGGACCCGTCGAGCTCCCGGGATCTGGTCGTGGC ACGCTCAGGGGAGGGGCTCCCGGCGGGAATGGAGGTCTTCGGCCCCGTCACCGCCGGCCA GGTGTCATTTTTGCTTGGTCTATTCCCTGTTCTCATTGCATGGATCTATTCAGAAGTCCT GGAGTACAGAAAATCTTCGTCTATGAAAGTTCACTCCGATTCCAATTTGGAGAATGGAAC TGTCAAAGAAGATGATAAAACGGTATTGCTGGAAGGAGGCCTGTCAAAGTCACCATCTAC AAAGTTTCGGATCAATTCTACAAAAGCAAACCTCATAAGGTTTATAACAATGGATGAATC TTTCCTTCTGGAAAATCGTGCTGTACTGAGAGCAATGGCAGAATTTGGCATCGTTCTGGT TTATTTCTACATTTGTGATCGGACAAACATATTTCCAGAAAGCAAGAAGAGTTACAACCG TGATCTGTTTCTGTTTTTATACATTCTTCTCATCATAGCATCAGCATTAACATCACTTAA GAAGCACCATGACAAATCAGCATTCTCAGGGAAATCTATACTCTATCTTAATCGCCATCA AACAGAGGAATGGAAAGGTTGGATGCAGGTCCTGTTTTTAATGTACCACTATTTTGCCGC CACTGAAATATACAATGCAATTCGTGTTTTCATTGCTGCCTATGTCTGGATGACTGGATT TGGGAACTTCTCATACTATTATATTAAGAAAGACTTTAGTCTTGCCAGATTTGCTCAGAT GATGTGGAGACTTAATTTTTTTGTGGCTTTCTGCTGCATTGTCCTTGACAATGATTACAT GCTCTATTACATATGCCCAATGCACACTTTGTTTACTCTTATGGTATATGGGTCCCTTGG TCTCTTTAATAAGTATAATGAGATACCTTCAGTGATGGCAATGAAGATTGTCAGCTGCTT CTTAGCAGTGATCTTGATATGGGAAATTCCTGGTGTATTTGAACTGCTGTGGAGTCCATT TACATTTCTGCTAGGCTACAAGGACCCAGAGCCTTCAAAAGCAAACTTACCACTGTTGCA TGAGTGGCATTTCCGATCTGGCCTTGATCGTTATATATGGATTATTGGAATGATCTATGC CTACTTCCATCCAAATGTTGAAAGATGGATGGAAAAGCTTGAAGAATCTGAAACTAAGGT TAGGTTGTCAATTAAGGGAACCATCATTAGTATTTCCTTGGTGGCTGGCTATTTGTGGTA CGAGTATATTTACAAACTAGACAAAATTACATACAACAAGTACCATCCGTACACATCATG GATTCCTATCACTGTTTATATCTCCCTAAGGAATTGCACTCAGCAGCTTAGAAACGTCTC TTTAACTCTTTTTGCGTGGCTTGGCAAGATTACTCTGGAGACCTATATCTCTCAGATCCA CATTTGGCTCAGGTCTAACATGCCTAACGGGCAGCCAAAATGGCTTCTCTCTTTCATTCC GGGTTACCCACTGCTCAACTTTATGCTTGCTACAGCAATATATCTTCTTATATCATACAG AGTGTTTGAGCTGACAGGTGTGTTGAAGTCAGCTTTTATTCCCAGCAGAGATAACAATCG TCTATATCAAAATTTTGTTGCCGGGATTGCCATCTCCGTATGTCTGTATTTCCTCTCAAT TGTACTTCTTAAGATTCCCATTGTATAGGTAAAAGAACCTCAACAGACAACACAAATCAA TGCATCTATTATATACTAGACAACAGAAAGGTTTTGTGGCGCAGTTCCAGGAAAAGAAAA TGTTCACGGTAGAAGTTTGCTTGTGAATTGTTGTTAGAATGATCCGTCGACCGTCGGCGC CTAGTTCCACCTTGCAGATGGAGATAAGTGCACTCCAAATAGGAAGAGGATATTGTTTTC CACCCCTTTGGAAAGTAATGTATACATTCAGGCAGTCCTTGCGTTCTTTTAGAAGTAATA GTTGGTTGCAGACTTTTAGCCATAAAAAGTGTACAAGGAATTTCTGTAAAATCAAAGTCA CTGAAACACCCAGTGGTAGATTCGTGCATTGGTCATATTTCAGAGC