Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os01t0629900-02
CDS Infomation	cds chromosome:IRGSP-1.0:1:25152119:25154627:-1 gene:Os01g0629900 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:MAP kinase 20-1 description:Similar to Blast and wounding induced mitogen-activated protein kinase. (Os01t0629900-01);Similar to Mitogen-activated protein kinase 10. (Os01t0629900-02);Similar to Mitogen-activated protein kinase 10. (Os01t0629900-03);Similar to Mitogen-activated protein kinase 10. (Os01t0629900-04)
Sequence	AATGACAAAGCAAGGAGGTATCTGAGTAGCATGAGAAAGAAGGAGCCAATCCTATTTTCG CAGAAGTTTCCTAGTGCAGATCCTTTGGCGTTGGATCTTCTACAAAAACTATTAGCATTC GATCCAAAGGACCGTCCAACTGCCGAAGAGGCATTGGCTCATCCATACTTCAAAGGGCTC GCAAAAGTTGAGAGAGAACCATCCTGTCAACCTATCACAAAAATGGAGTTTGAGTTTGAG CGTAGAAGAGTGACAAAGGAAGATATAAGAGAGTTGATATTCCGTGAAATACTGGAATAC CATCCACAATTGCTCAAAGACTATATCAATGGCACCGAGAGAACAACCTTTCTATACCCA AGTGCTGTTGATCAATTTAGAAAGCAATTTGCCCATCTTGAAGAAAATGGTGGAAATGGC CCGGTAATTCCAATGGATAGAAAGCACACTTCTCTTCCCAGGTCTACTATTGTTCACTCA ACTCCAATTCCTGCCAAGGAACAGCCCCGCATTGGCCCATCAAGGGATAAACCATCTGAT GAACCCTATAGCAATCCCCGGGAATTTGACAGATTTTCTGGCAATGCCCCGAGGACCTCA CAAGCTCCACAAAGAGTGCCAACAGCAAGACCAGGAAGAGTTGTTGGTCCAGTATTGCCT TATGAAAATGGTGCCACAAAGGATTCCTATGACGCACGGAGATTGGCAATGAACTCAGGG TATCCTCCCCAGCAACAAATCCCTCAAGCTTATGGTTATTATCAGATACCCGGTAAGTCA GCTTGTTCTGAGCTGTCGCAGGCCGAAAGGTATACGCTGCACCAGCAGGCCTACACTTGC GCAAACAGTGCCACTGTGACTGATGTTGCTCTGGACATGAGAGCACCCCCGTTCCATCTA TCAGGAGGGCCGAAAAGCGATTCGTCCGAAAGGTTAGCAGCAGAGACAAACCTATACACG AGATCTCTCAATGGCCTCGCTGCTACTGCTGCGGGAGTGGCAGCAAGTGCGCACAGAAAG GTCGGTGTTGTTCCCTACGGCATGTCGAGGATGTATTAG

Peptide Sequence

PEP ID	Os01t0629900-02
PEP Infomation	pep chromosome:IRGSP-1.0:1:25152119:25154627:-1 gene:Os01g0629900 transcript:Os01t0629900-02 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:MAP kinase 20-1 description:Similar to Blast and wounding induced mitogen-activated protein kinase. (Os01t0629900-01);Similar to Mitogen-activated protein kinase 10. (Os01t0629900-02);Similar to Mitogen-activated protein kinase 10. (Os01t0629900-03);Similar to Mitogen-activated protein kinase 10. (Os01t0629900-04)
Sequence	NDKARRYLSSMRKKEPILFSQKFPSADPLALDLLQKLLAFDPKDRPTAEEALAHPYFKGL AKVEREPSCQPITKMEFEFERRRVTKEDIRELIFREILEYHPQLLKDYINGTERTTFLYP SAVDQFRKQFAHLEENGGNGPVIPMDRKHTSLPRSTIVHSTPIPAKEQPRIGPSRDKPSD EPYSNPREFDRFSGNAPRTSQAPQRVPTARPGRVVGPVLPYENGATKDSYDARRLAMNSG YPPQQQIPQAYGYYQIPGKSACSELSQAERYTLHQQAYTCANSATVTDVALDMRAPPFHL SGGPKSDSSERLAAETNLYTRSLNGLAATAAGVAASAHRKVGVVPYGMSRMY

Transcript Sequence

Transcript ID	Os01t0629900-02
Transcript Infomation	cdna chromosome:IRGSP-1.0:1:25152119:25154627:-1 gene:Os01g0629900 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:MAP kinase 20-1 description:Similar to Blast and wounding induced mitogen-activated protein kinase. (Os01t0629900-01);Similar to Mitogen-activated protein kinase 10. (Os01t0629900-02);Similar to Mitogen-activated protein kinase 10. (Os01t0629900-03);Similar to Mitogen-activated protein kinase 10. (Os01t0629900-04)
Sequence	GGAATGACAAAGCAAGGAGGTATCTGAGTAGCATGAGAAAGAAGGAGCCAATCCTATTTT CGCAGAAGTTTCCTAGTGCAGATCCTTTGGCGTTGGATCTTCTACAAAAACTATTAGCAT TCGATCCAAAGGACCGTCCAACTGCCGAAGAGGCATTGGCTCATCCATACTTCAAAGGGC TCGCAAAAGTTGAGAGAGAACCATCCTGTCAACCTATCACAAAAATGGAGTTTGAGTTTG AGCGTAGAAGAGTGACAAAGGAAGATATAAGAGAGTTGATATTCCGTGAAATACTGGAAT ACCATCCACAATTGCTCAAAGACTATATCAATGGCACCGAGAGAACAACCTTTCTATACC CAAGTGCTGTTGATCAATTTAGAAAGCAATTTGCCCATCTTGAAGAAAATGGTGGAAATG GCCCGGTAATTCCAATGGATAGAAAGCACACTTCTCTTCCCAGGTCTACTATTGTTCACT CAACTCCAATTCCTGCCAAGGAACAGCCCCGCATTGGCCCATCAAGGGATAAACCATCTG ATGAACCCTATAGCAATCCCCGGGAATTTGACAGATTTTCTGGCAATGCCCCGAGGACCT CACAAGCTCCACAAAGAGTGCCAACAGCAAGACCAGGAAGAGTTGTTGGTCCAGTATTGC CTTATGAAAATGGTGCCACAAAGGATTCCTATGACGCACGGAGATTGGCAATGAACTCAG GGTATCCTCCCCAGCAACAAATCCCTCAAGCTTATGGTTATTATCAGATACCCGGTAAGT CAGCTTGTTCTGAGCTGTCGCAGGCCGAAAGGTATACGCTGCACCAGCAGGCCTACACTT GCGCAAACAGTGCCACTGTGACTGATGTTGCTCTGGACATGAGAGCACCCCCGTTCCATC TATCAGGAGGGCCGAAAAGCGATTCGTCCGAAAGGTTAGCAGCAGAGACAAACCTATACA CGAGATCTCTCAATGGCCTCGCTGCTACTGCTGCGGGAGTGGCAGCAAGTGCGCACAGAA AGGTCGGTGTTGTTCCCTACGGCATGTCGAGGATGTATTAGTGCCCAACCATGGCACATC CTGCATGCCCAATGGGAGCTCTGATGCTAGCTTGCGGCGAAGCATTGGGAACAAAGTGGC AGTTCAAGCTAGTTTGGGCACCAAGAGCACAGGGCAATCCAAGGTTGACGACGATGCCTA AGAAGTTGCATTGGTGCCCTGCTGCTCCTGTTCCTGCTTGATCAGGAACCACCACCGGAG GTGTCAAAAGCTTTTCAACTCTCTATTCGCTTTAGGCAAATCAGCTTGTATCTGCCTGTG TGTGTGTAAGAAAATGTGCCCTTCGTTGCACACTTGAAGGGGGTAGTCCAGTGGCTTGTA ATCTGAGCATATTTTAGGCGCCAATTGTATTTCTAGGGTGAGGGGACAAAAGGGAAAGGA AGGACCACTAACCTTTTCCTCTTTTTTTTTTCTTTTTCCAATGTTGTATAGAGATGTTTC TCATATCAAAAGTGCTACATCAGAATGACTTGAGAAAGATATAAAGCAGACAATTGCGCG GTTT