Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os01t0629600-01
CDS Infomation	cds chromosome:IRGSP-1.0:1:25144502:25145949:1 gene:Os01g0629600 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:SERINE CARBOXYPEPTIDASE 4 description:Peptidase S10, serine carboxypeptidase family protein. (Os01t0629600-01)
Sequence	ATGGCGTCGTTTCTTTCCCGCGCCGCCGCCGTCTCCCTCCTCGCCATCGTCCTCGTCCTG ACTGCCGCCACGTCCACCTCCCCTGCGGCCGCGGCCGCTCGGTTCCCGGAGGAGGCGCGC CCCACGAGGTCGGGGTACCTCAACGTCACGTCCACCAACTCACTCTACTTCGCCTTCTAC GAGGCCACCGACCCGGTCACCACGCAGCCGGCCGCCGTGCCGCTCCTCGTTTGGCTCCAG GGCGGCCCCGGCTGCTCCTCCCTCATCGGCAGCTTCGCCGAGCTCGGCCCCTACCTCCTC CTCGACTCCACCTCCGCCCTCGCCCGCAACGACAACCGGTGGAACCGCCGCTTCGGCGTG ATCTTCATCGACAACCCGCTCGGCGCCGGTTTCAGCGCGCCTGCCTCCGGCGACGACATC CCGACCGACGAGCGCACCATCGCCGCGCACCTCCTCGCGGCCCTGCAGTCGTTCATGGCG CTCGATCCGGCCTTCCGCGCGCGCCCGCTGTTCCTCACCGGGGAGAGCTACGCCGGCAAG TACATCCCCGCGGCCGCGTCGCACATCCTCGACGCCAACGCCAAGCTCACGGACGACCGT AGGGTGAACCTCCAGGGCATCGCCATCGGCAACGGCATGACGCACCCGGTGGCGCAGGTG ACCGTGCACGCCGACCAGGCCTACTTCGCCGGGCTGATCAACGCCGAGCAGAAGGCCAAG GTCGAAGAAATGCAGGACAAGACGGTAAGCCTGATCAAATCCAAGAAGTGGGCCGCGGCG AGGAGGGAGAGGAACAGGATCATAGCGTTCCTCAAGAACGCCACCGGCGTCGCTACGCCG TTCAACTACGCGCGGGAGAAGGGGTACCCGACGCGGCCGCTCCGGGACTTCCTCAACACC GGCGAGGCGAAGGCGGCGCTGGGCGCGAGGAGCGACGTGGAGTGGGCGCGCTGCAGCGAG GCCGTGTCGGCGGCGCTCGCCGACGACATCATGAGGAGCGCCAGGGGCGACGTGGAGGCC GTCTTCCTGGCGCCGGATGGCGTCCGGGTGCTGCTGTTCCAGGGCGTGTTCGACCTGCAC AGCGGGCCGGCGTCCGTGGAGGCGTGGGTGAGGGAGCTGGCGTGGCCTGGCCTGGGCGCG TTCCTCGCCGCGGAGCGCGCCGTGTGGCGGCTCGGGGACGAGCAGCTCGCCGGGTACGTG CAGAGGTCGGGGGCGCTCGCGAATGCGGTCATCGTCGGGGCCGGGCACATGGCGGCCGGC GACAACCGGCCGGCGGCGCAGGCGATGATCGAGGGATGGGTGTTGCAGACGGGGCCGTTC GACGGAAGCGGTCAACGAGTCGTTGGCTCCTTATTCTGA

Peptide Sequence

PEP ID	Os01t0629600-01
PEP Infomation	pep chromosome:IRGSP-1.0:1:25144502:25145949:1 gene:Os01g0629600 transcript:Os01t0629600-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:SERINE CARBOXYPEPTIDASE 4 description:Peptidase S10, serine carboxypeptidase family protein. (Os01t0629600-01)
Sequence	MASFLSRAAAVSLLAIVLVLTAATSTSPAAAAARFPEEARPTRSGYLNVTSTNSLYFAFY EATDPVTTQPAAVPLLVWLQGGPGCSSLIGSFAELGPYLLLDSTSALARNDNRWNRRFGV IFIDNPLGAGFSAPASGDDIPTDERTIAAHLLAALQSFMALDPAFRARPLFLTGESYAGK YIPAAASHILDANAKLTDDRRVNLQGIAIGNGMTHPVAQVTVHADQAYFAGLINAEQKAK VEEMQDKTVSLIKSKKWAAARRERNRIIAFLKNATGVATPFNYAREKGYPTRPLRDFLNT GEAKAALGARSDVEWARCSEAVSAALADDIMRSARGDVEAVFLAPDGVRVLLFQGVFDLH SGPASVEAWVRELAWPGLGAFLAAERAVWRLGDEQLAGYVQRSGALANAVIVGAGHMAAG DNRPAAQAMIEGWVLQTGPFDGSGQRVVGSLF

Transcript Sequence

Transcript ID	Os01t0629600-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:1:25144502:25145949:1 gene:Os01g0629600 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:SERINE CARBOXYPEPTIDASE 4 description:Peptidase S10, serine carboxypeptidase family protein. (Os01t0629600-01)
Sequence	GGGCACAGCAGTAGCAGCCAACGGCCGCGCCGCCACAACATGGCGTCGTTTCTTTCCCGC GCCGCCGCCGTCTCCCTCCTCGCCATCGTCCTCGTCCTGACTGCCGCCACGTCCACCTCC CCTGCGGCCGCGGCCGCTCGGTTCCCGGAGGAGGCGCGCCCCACGAGGTCGGGGTACCTC AACGTCACGTCCACCAACTCACTCTACTTCGCCTTCTACGAGGCCACCGACCCGGTCACC ACGCAGCCGGCCGCCGTGCCGCTCCTCGTTTGGCTCCAGGGCGGCCCCGGCTGCTCCTCC CTCATCGGCAGCTTCGCCGAGCTCGGCCCCTACCTCCTCCTCGACTCCACCTCCGCCCTC GCCCGCAACGACAACCGGTGGAACCGCCGCTTCGGCGTGATCTTCATCGACAACCCGCTC GGCGCCGGTTTCAGCGCGCCTGCCTCCGGCGACGACATCCCGACCGACGAGCGCACCATC GCCGCGCACCTCCTCGCGGCCCTGCAGTCGTTCATGGCGCTCGATCCGGCCTTCCGCGCG CGCCCGCTGTTCCTCACCGGGGAGAGCTACGCCGGCAAGTACATCCCCGCGGCCGCGTCG CACATCCTCGACGCCAACGCCAAGCTCACGGACGACCGTAGGGTGAACCTCCAGGGCATC GCCATCGGCAACGGCATGACGCACCCGGTGGCGCAGGTGACCGTGCACGCCGACCAGGCC TACTTCGCCGGGCTGATCAACGCCGAGCAGAAGGCCAAGGTCGAAGAAATGCAGGACAAG ACGGTAAGCCTGATCAAATCCAAGAAGTGGGCCGCGGCGAGGAGGGAGAGGAACAGGATC ATAGCGTTCCTCAAGAACGCCACCGGCGTCGCTACGCCGTTCAACTACGCGCGGGAGAAG GGGTACCCGACGCGGCCGCTCCGGGACTTCCTCAACACCGGCGAGGCGAAGGCGGCGCTG GGCGCGAGGAGCGACGTGGAGTGGGCGCGCTGCAGCGAGGCCGTGTCGGCGGCGCTCGCC GACGACATCATGAGGAGCGCCAGGGGCGACGTGGAGGCCGTCTTCCTGGCGCCGGATGGC GTCCGGGTGCTGCTGTTCCAGGGCGTGTTCGACCTGCACAGCGGGCCGGCGTCCGTGGAG GCGTGGGTGAGGGAGCTGGCGTGGCCTGGCCTGGGCGCGTTCCTCGCCGCGGAGCGCGCC GTGTGGCGGCTCGGGGACGAGCAGCTCGCCGGGTACGTGCAGAGGTCGGGGGCGCTCGCG AATGCGGTCATCGTCGGGGCCGGGCACATGGCGGCCGGCGACAACCGGCCGGCGGCGCAG GCGATGATCGAGGGATGGGTGTTGCAGACGGGGCCGTTCGACGGAAGCGGTCAACGAGTC GTTGGCTCCTTATTCTGACTTACGGGTGGGCTTGATTTTGACTGAAATAAATGCTTTTTG GTACTCGT