Gene sequences

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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os01t0624000-04
CDS Infomation	cds chromosome:IRGSP-1.0:1:24913567:24919962:-1 gene:Os01g0624000 gene_biotype:protein_coding transcript_biotype:protein_coding description:Neutral/alkaline nonlysosomal ceramidase family protein. (Os01t0624000-01);Neutral/alkaline nonlysosomal ceramidase family protein. (Os01t0624000-02);Similar to Neutral ceramidase. (Os01t0624000-03);Similar to Neutral ceramidase. (Os01t0624000-04)
Sequence	TGTAATGGGAAAAATGAACTTTGCTATGGACGAGGCCCAGGATACCCTGATGAGTTTGAA AGTACCCGTGTTATTGGGAATAGGCAATTTCTAAAGGCTAGAGATCTCTTTGATTCAGCT TCTGAAGAAATACAAGGCAAAATTGACTATAGGCACACTTATTTAGATTTCTCAAAACTT GAAGTTAAAGTTTCTACAAGTGCAGGCGGTCAGCAGACCGTGAAAACATGCCCAGCAGCA ATGGGCTTTGCTTTTGCTGCTGGAACCACAGATGGCCCTGGAGCTTTTGATTTCAGACAA GGAGATGTCAAGGGAAACCCTTTCTGGAAGTTAGTAAGGAACTTGTTAAAGACACCAGGG AAGGACCAAGTTGAATGTCATTCTCCAAAACCAATATTGCTAGACACTGGTGAAATGAAG GAACCATATGATTGGGCGCCTGCGATACTTCCAGTTCAAATGATTAGAATTGGTCAGCTG GTTATCTTGTGTGTTCCTGGAGAATTCACAACAATGGCTGGCAGGCGTCTACGTGATGCT GTGAAAACTGTTCTTACAAGTGGAAACAGTGAATTTGATAAAAATATTCATGTTGTTCTT GCGGGGCTAACAAACAGCTACTCTCAGTACATTACAACTTTTGAAGAATACCAGATCCAA AGATATGAGGGAGCATCAACGTTGTATGGTCCCCACACCTTGAGTGCCTATATCCAAGAA TTTCAGAAACTTGCTATGGCCATGATTGCAAACAAAGAGGTCCCAACAAATTTCCAACCT CCTGATATGTTGGACAAGCAAATTGGACTACTTCCTGGTGTTGTTTTTGACTCAACTCCT CTTGGTGTCAAGTTTGGGGATGTCAACTCGGATGTTCCTGGTAACTCAACATTCAACAAG GGTAGTACTGTGAATGCTACATTTTATTCAGCATGCCCAAGGAATGACCTTCTTACGGAT GGTACCTTTGCACTCGTCGAGAAGCTAGATGGTAACAATAATTGGGTTCCTGTCTACGAT GATGATGATTGGTCATTGCGTTTCAAGTGGTCAAGGCCCGCAAGATTGAGTTCAAGAAGT TTTGCAACTCTAGAGTGGACAGTTCCTGAAGACGCTGCTGCTGGTGTTTACAGATTGAGG CATTTTGGTGCCTCCAAACCAATGTTTGGTTCGGTCAGGCATTTTACAGGAACCTCTCGT GCTTTCGCGGTGCGTTAG

Peptide Sequence

PEP ID	Os01t0624000-04
PEP Infomation	pep chromosome:IRGSP-1.0:1:24913567:24919962:-1 gene:Os01g0624000 transcript:Os01t0624000-04 gene_biotype:protein_coding transcript_biotype:protein_coding description:Neutral/alkaline nonlysosomal ceramidase family protein. (Os01t0624000-01);Neutral/alkaline nonlysosomal ceramidase family protein. (Os01t0624000-02);Similar to Neutral ceramidase. (Os01t0624000-03);Similar to Neutral ceramidase. (Os01t0624000-04)
Sequence	CNGKNELCYGRGPGYPDEFESTRVIGNRQFLKARDLFDSASEEIQGKIDYRHTYLDFSKL EVKVSTSAGGQQTVKTCPAAMGFAFAAGTTDGPGAFDFRQGDVKGNPFWKLVRNLLKTPG KDQVECHSPKPILLDTGEMKEPYDWAPAILPVQMIRIGQLVILCVPGEFTTMAGRRLRDA VKTVLTSGNSEFDKNIHVVLAGLTNSYSQYITTFEEYQIQRYEGASTLYGPHTLSAYIQE FQKLAMAMIANKEVPTNFQPPDMLDKQIGLLPGVVFDSTPLGVKFGDVNSDVPGNSTFNK GSTVNATFYSACPRNDLLTDGTFALVEKLDGNNNWVPVYDDDDWSLRFKWSRPARLSSRS FATLEWTVPEDAAAGVYRLRHFGASKPMFGSVRHFTGTSRAFAVR

Transcript Sequence

Transcript ID	Os01t0624000-04
Transcript Infomation	cdna chromosome:IRGSP-1.0:1:24913567:24919962:-1 gene:Os01g0624000 gene_biotype:protein_coding transcript_biotype:protein_coding description:Neutral/alkaline nonlysosomal ceramidase family protein. (Os01t0624000-01);Neutral/alkaline nonlysosomal ceramidase family protein. (Os01t0624000-02);Similar to Neutral ceramidase. (Os01t0624000-03);Similar to Neutral ceramidase. (Os01t0624000-04)
Sequence	ATGTAATGGGAAAAATGAACTTTGCTATGGACGAGGCCCAGGATACCCTGATGAGTTTGA AAGTACCCGTGTTATTGGGAATAGGCAATTTCTAAAGGCTAGAGATCTCTTTGATTCAGC TTCTGAAGAAATACAAGGCAAAATTGACTATAGGCACACTTATTTAGATTTCTCAAAACT TGAAGTTAAAGTTTCTACAAGTGCAGGCGGTCAGCAGACCGTGAAAACATGCCCAGCAGC AATGGGCTTTGCTTTTGCTGCTGGAACCACAGATGGCCCTGGAGCTTTTGATTTCAGACA AGGAGATGTCAAGGGAAACCCTTTCTGGAAGTTAGTAAGGAACTTGTTAAAGACACCAGG GAAGGACCAAGTTGAATGTCATTCTCCAAAACCAATATTGCTAGACACTGGTGAAATGAA GGAACCATATGATTGGGCGCCTGCGATACTTCCAGTTCAAATGATTAGAATTGGTCAGCT GGTTATCTTGTGTGTTCCTGGAGAATTCACAACAATGGCTGGCAGGCGTCTACGTGATGC TGTGAAAACTGTTCTTACAAGTGGAAACAGTGAATTTGATAAAAATATTCATGTTGTTCT TGCGGGGCTAACAAACAGCTACTCTCAGTACATTACAACTTTTGAAGAATACCAGATCCA AAGATATGAGGGAGCATCAACGTTGTATGGTCCCCACACCTTGAGTGCCTATATCCAAGA ATTTCAGAAACTTGCTATGGCCATGATTGCAAACAAAGAGGTCCCAACAAATTTCCAACC TCCTGATATGTTGGACAAGCAAATTGGACTACTTCCTGGTGTTGTTTTTGACTCAACTCC TCTTGGTGTCAAGTTTGGGGATGTCAACTCGGATGTTCCTGGTAACTCAACATTCAACAA GGGTAGTACTGTGAATGCTACATTTTATTCAGCATGCCCAAGGAATGACCTTCTTACGGA TGGTACCTTTGCACTCGTCGAGAAGCTAGATGGTAACAATAATTGGGTTCCTGTCTACGA TGATGATGATTGGTCATTGCGTTTCAAGTGGTCAAGGCCCGCAAGATTGAGTTCAAGAAG TTTTGCAACTCTAGAGTGGACAGTTCCTGAAGACGCTGCTGCTGGTGTTTACAGATTGAG GCATTTTGGTGCCTCCAAACCAATGTTTGGTTCGGTCAGGCATTTTACAGGAACCTCTCG TGCTTTCGCGGTGCGTTAGTTGATACGCCTTGAGCTTTTTATGGCTTATGAAGGTTTACA GCACCAACTTCATACATGGAAACCCTGCCATTATATCCATAGGGCTTATCTGCTTCTTAT TTACTTGTATTTGAGGGTAATAACACTGTTCAATCTTATGGAAGTGTGAAACTGCTGTCC CAGTGCATGAACTAAGAATGGGAAATATACAGAATGTACATAGGTGCTCTTTTTATGTAA ACATGCATGCTTCTTGTGATTTCCCGTGGGATTTTGGCCAAGAGATCTTGCATCC