Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os01t0623900-01
CDS Infomation

cds chromosome:IRGSP-1.0:1:24908651:24910090:1 gene:Os01g0623900 gene_biotype:protein_coding transcript_biotype:protein_coding description:Conserved hypothetical protein. (Os01t0623900-01)
Sequence

ATGAAGGTCCTACGGCTGCTCGCGGCGCGGCGGTTCCGGCGCCGCGCGGTGTCCACGATC
ACGGCGACGGCGCCGGCCACGCCATGCGGTGGCGGCGGCTGGTATGGCGAGGACGAGGGC
CCGTTCTTTGACCTCGACCTGTCGTGCTGCTCGGCCTCGGCGCCCGCGTCGAGCGCCGAG
TCGGGGTCCGAGTCGGAGGACTACTCGTCGTGCGCCGGCGAGTCAGACTTCGTCATCTCG
CTGCAGCGGAGCCGCTCCGCGTCGCCGTCGTACGAGGAGCGGGTCTTCTACGTTGGCGGC
GGTAGTGGGTGGGCGCGCGCGGCGGCGGCGGCGCCCGCGCACCTCAAGTTCTGCGCGTCC
GAGCCGAGCGACGCCGCCTCGCGGTACGGCTCCGGCAGGCGCGGCAAGCTGCGCACGCTC
AGCTTCGGGTCCGCCAAGGCCGCGTTCTACGGCGGCCGCGCCAGCTTCTCCAGGAGCTCC
AACAGCGCGCGCTCGGCCAGGCTCTTCGCCGCGTTCGGCTACGGCTCGCCGGACCAGGGG
GACGAGGCCAACAGGAGGACGCCCTCGCGGGACGTGATCAGGCGGTACCTCAGCAAGATC
TCGAGGCAACTGCGCCGGGTAGCCCCCAGCGCCGGCGCGGACCTCCGGCTACGGAAGAGC
CGGTCGGCGTCCGCGGCGCAGACGGCGGCGTGCCAGTCGCCGCCGCCTCGCCGCGACGAC
TCGCTCCTCGAGCAGCAGGACGGCATCGCGAGCGCCATCGCGCACTGCAAGGAGTCGCTC
CACCGTGGTACGCGCCCCGCGCCACATTGTCACTTGTGA

Peptide Sequence

PEP ID

Os01t0623900-01
PEP Infomation

pep chromosome:IRGSP-1.0:1:24908651:24910090:1 gene:Os01g0623900 transcript:Os01t0623900-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Conserved hypothetical protein. (Os01t0623900-01)
Sequence

MKVLRLLAARRFRRRAVSTITATAPATPCGGGGWYGEDEGPFFDLDLSCCSASAPASSAE
SGSESEDYSSCAGESDFVISLQRSRSASPSYEERVFYVGGGSGWARAAAAAPAHLKFCAS
EPSDAASRYGSGRRGKLRTLSFGSAKAAFYGGRASFSRSSNSARSARLFAAFGYGSPDQG
DEANRRTPSRDVIRRYLSKISRQLRRVAPSAGADLRLRKSRSASAAQTAACQSPPPRRDD
SLLEQQDGIASAIAHCKESLHRGTRPAPHCHL

Transcript Sequence

Transcript ID

Os01t0623900-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:1:24908651:24910090:1 gene:Os01g0623900 gene_biotype:protein_coding transcript_biotype:protein_coding description:Conserved hypothetical protein. (Os01t0623900-01)
Sequence

CTCCCCCCACCAACACCACTACCCCTCCACATCTCCCACTAATAACACCGACCTGACGAG
CACCACCGTCCCGAACACCAGCAGCTGCGCACATGAAGGTCCTACGGCTGCTCGCGGCGC
GGCGGTTCCGGCGCCGCGCGGTGTCCACGATCACGGCGACGGCGCCGGCCACGCCATGCG
GTGGCGGCGGCTGGTATGGCGAGGACGAGGGCCCGTTCTTTGACCTCGACCTGTCGTGCT
GCTCGGCCTCGGCGCCCGCGTCGAGCGCCGAGTCGGGGTCCGAGTCGGAGGACTACTCGT
CGTGCGCCGGCGAGTCAGACTTCGTCATCTCGCTGCAGCGGAGCCGCTCCGCGTCGCCGT
CGTACGAGGAGCGGGTCTTCTACGTTGGCGGCGGTAGTGGGTGGGCGCGCGCGGCGGCGG
CGGCGCCCGCGCACCTCAAGTTCTGCGCGTCCGAGCCGAGCGACGCCGCCTCGCGGTACG
GCTCCGGCAGGCGCGGCAAGCTGCGCACGCTCAGCTTCGGGTCCGCCAAGGCCGCGTTCT
ACGGCGGCCGCGCCAGCTTCTCCAGGAGCTCCAACAGCGCGCGCTCGGCCAGGCTCTTCG
CCGCGTTCGGCTACGGCTCGCCGGACCAGGGGGACGAGGCCAACAGGAGGACGCCCTCGC
GGGACGTGATCAGGCGGTACCTCAGCAAGATCTCGAGGCAACTGCGCCGGGTAGCCCCCA
GCGCCGGCGCGGACCTCCGGCTACGGAAGAGCCGGTCGGCGTCCGCGGCGCAGACGGCGG
CGTGCCAGTCGCCGCCGCCTCGCCGCGACGACTCGCTCCTCGAGCAGCAGGACGGCATCG
CGAGCGCCATCGCGCACTGCAAGGAGTCGCTCCACCGTGGTACGCGCCCCGCGCCACATT
GTCACTTGTGATCCTCCATTTCGTGATCTCGTCTCGAAGTGCACTGAATCCTGACGCCCC
GTGTTCATTCACTTGCGTCGTGCAGCGTCCATGTCAGAGTTCGACTCGCCATTGCTGCGG
TCACGGAGCGATCCACGAAGCTAGCTGTACCAATCGGCTTCGAATTCTCTCGACGAAGCA
GAGGCCTCCGAAGAAGCTTCGCGCTGAATTTCGCGGAGGAAGGCGAGATGAAGAAAAAAA
AGAAGAAGACGAGGGAACCTTCAAGTACGAATTGCTTGTTAAAAGCCTCAAGAAAAGAAA
ACGCGGTGGTTCAGCGAGCGAGAGAATTCTCTTTTATTAACCTTTCTTCTTCTTTGGTGC
GAGTGAGTGAGTTGAGTTCGTTCTTTTGTGTAGTTTTAGGCGCGGGGAAAGAGCTCCTTT
TAGGCTCCTTTAGCCACTCCCCTCCTCACGTACAAGCGTGGAGTTGTCAGCTCTGTATGT
CACTTGTTGTTACTCCTCTTTTTCATATTTTGTTACTCGCAACACGACCTGTAATTAGGC