Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os01t0623500-01
CDS Infomation	cds chromosome:IRGSP-1.0:1:24894706:24899506:1 gene:Os01g0623500 gene_biotype:protein_coding transcript_biotype:protein_coding description:ATPase, AAA-type, core domain containing protein. (Os01t0623500-01)
Sequence	ATGGAGCACGGGAGCATCATCGCGTCGGCCGTGGGGGTGGGCGTCGGGGTGGGGGTCGGC ATCGGCCTCGTCTCGTCGCGGCTGACCGGGTTGGCGACTGGCGGCGGCGCCACGGCGGCG GAGGTGGAGGCGGAGCTGCGGTGTCTGGTGGTGGACGGCCGCGACGTCGGCGTCTCCTTC GACGACTTCCCGTACTACCTCAGCGAGCAGTCGAAGCTGGCCCTCACCAGCACGGCGTTC GTGCATCTGAGCCCAACGATCCTGCCCAATCACATCCGCGTCCTCTCCGCGTCCAGCCGC ACCATACTGCTCTGCGGCCCATCAGAGGCGTACCTTCAGTCGCTCGCGAAGGCTCTCGCA AACCAGTTCAGTGCTCGCCTGCTGCTGCTCGATGTCATCGACTTCGCGTGCAAGCTCCAT CATAAGTACGGCGGTCCAAGCAATACACAGACCCGTGAGAGATCCATGACAGAGGCAGCC TTCGATAGAGTGTCTAGTTTGGTTGGAGCTTTCAATCTGTTTCGCAAGAAGGAAGAACCA ACTGGAACAGGACCATTGAGCCGTGAAACAGGCATCCTTGATCTCAGGACTAGCACTTGT TGTCCTCATAACACACCTTCAGTACGGGTTCAGTTATCCTTGGTACCTCCCGAGAAGGAC CATGATCCCGAATCTTCTAAATACCTTGCATCAGTTAAACCATGCTGGAGTTTGAATGAG AAGGTTCTCATACAATCCCTTTACAAGATTATAGTTTCTGCTTCTGAAATCAGTCCAGTC ATTCTTTACATAAGGGATGTTGATGACTTGCTTGGAAGTTCAGAAAAAGCATACTGTATG TTTCAGAAAATGTTGAAAAAACTATCTGGACGGGTAATCGTGATTGGTTCACAATTCCTC GATGATGATGAGGATAGAGAAGATATTGAAGAATCTGTGTGTGCTCTTTTCCCTTGTATT CTGGAGACAAAGCCTCCCAAAGACAAGGTCCTTCTTGAGAAATGGAAGACCCAGATGGAG GAAGATTCGAATAATAACAATAATCAAGTCGTTCAAAACTACATCGCGGAAGTGCTCGCA GAAAACAATCTTGAGTGTGAAGATTTGAGCTCGATCAATGCAGATGATGATTGTAAAATC ATTGTGGCTTACTTAGAAGAAATTATAACCCCATCTGTCTCTTACCATCTGATGAATAAC AAGAACCCTAAATACAGAAACGGGAATCTTGTCATATCTTCGGAGAGCTTATCCCATGGA TTACGCATATTCCAAGAGAGCAACGACCTTGGGAAAGATACAGTGGAAGCAAAGGATGAG ACAGAGATGGTCGTTCCAGACAATGAGTATGAAAAGAAGATCCGACCAACGGTTATACCA GCCAATGAAATAGGAGTGACATTTGATGACATTGGAGCACTGGCTGATATCAAAGAATGC CTTCACGAGCTTGTCATGCTTCCTCTTCAACGACCTGATTTCTTCAAAGGTGGTCTCTTG AAGCCATGCAAGGGCGTTCTGCTGTTTGGGCCACCTGGTACGGGGAAAACAATGCTCGCC AAGGCCCTAGCAAACGCAGCAGGAGCTAGCTTCTTGAACATCTCTATGGCTAGTATGACA TCAAAATGGTACGGGGAGTCTGAGAAGTGCATCCAAGCCTTATTCAGCCTTGCTGCTAAA CTTGCACCAGCAATCATTTTCATCGATGAGGTAGACAGCATGCTAGGGAAACGAGATAAC CATAGCGAAAATGAGGCATCCCGCAGAGTAAAAAATGAGTTCATGGCTCACTGGGATGGA CTCTTGTCTAAGTCCAACGAAAGGATATTAGTCCTTGCTGCAACGAACAGGCCCTTTGAC CTTGATGATGCGGTGATAAGGAGATTTGAGCACAGAATCATGGTCGGCCTCCCAACGTTG GAGAGTAGAGAGCTGATTCTGAAGACATTGTTGTCGAAAGAGACGGTTGAAAATATTGAT TTCAAGGAGCTTGCCAAAATGACTGAAGGATACACCAGCAGTGACTTGAAGAATATTTGC GTGACGGCAGCTTATCATCCTGTCAGAGAGCTACTTCAGAAAGAAAAGAACAAGGTCAAG AAGGAAACTGCACCAGAAACGAAGCAAGAACCAAAAGAAAAGACCAAAATTCAAGAAAAC GGGACAAAAAGTTCGGATAGTAAGACTGAAAAGGACAAGCTTGACAACAAGGAAGGTAAG AAAGACAAGCCTGCTGACAAGAAAGATAAATCAGACAAAGGCGATGCTGGAGAGACTACC CTGAGACCGCTAAACATGGAGGACTTGAGAAAGGCAAAGGATGAAGTCGCCGCTAGCTTC GCTAGCGAAGGCGTTGTGATGAATCAGATCAAGGAATGGAATGAGCTCTACGGCAAAGGC GGGTCGAGGAAGCGGGAGCAACTGACATACTTCTTGTAG

Peptide Sequence

PEP ID	Os01t0623500-01
PEP Infomation	pep chromosome:IRGSP-1.0:1:24894706:24899506:1 gene:Os01g0623500 transcript:Os01t0623500-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:ATPase, AAA-type, core domain containing protein. (Os01t0623500-01)
Sequence	MEHGSIIASAVGVGVGVGVGIGLVSSRLTGLATGGGATAAEVEAELRCLVVDGRDVGVSF DDFPYYLSEQSKLALTSTAFVHLSPTILPNHIRVLSASSRTILLCGPSEAYLQSLAKALA NQFSARLLLLDVIDFACKLHHKYGGPSNTQTRERSMTEAAFDRVSSLVGAFNLFRKKEEP TGTGPLSRETGILDLRTSTCCPHNTPSVRVQLSLVPPEKDHDPESSKYLASVKPCWSLNE KVLIQSLYKIIVSASEISPVILYIRDVDDLLGSSEKAYCMFQKMLKKLSGRVIVIGSQFL DDDEDREDIEESVCALFPCILETKPPKDKVLLEKWKTQMEEDSNNNNNQVVQNYIAEVLA ENNLECEDLSSINADDDCKIIVAYLEEIITPSVSYHLMNNKNPKYRNGNLVISSESLSHG LRIFQESNDLGKDTVEAKDETEMVVPDNEYEKKIRPTVIPANEIGVTFDDIGALADIKEC LHELVMLPLQRPDFFKGGLLKPCKGVLLFGPPGTGKTMLAKALANAAGASFLNISMASMT SKWYGESEKCIQALFSLAAKLAPAIIFIDEVDSMLGKRDNHSENEASRRVKNEFMAHWDG LLSKSNERILVLAATNRPFDLDDAVIRRFEHRIMVGLPTLESRELILKTLLSKETVENID FKELAKMTEGYTSSDLKNICVTAAYHPVRELLQKEKNKVKKETAPETKQEPKEKTKIQEN GTKSSDSKTEKDKLDNKEGKKDKPADKKDKSDKGDAGETTLRPLNMEDLRKAKDEVAASF ASEGVVMNQIKEWNELYGKGGSRKREQLTYFL

Transcript Sequence

Transcript ID	Os01t0623500-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:1:24894706:24899506:1 gene:Os01g0623500 gene_biotype:protein_coding transcript_biotype:protein_coding description:ATPase, AAA-type, core domain containing protein. (Os01t0623500-01)
Sequence	GATCGCACCCGTACCGAATCCGCGCCCCTGAAAGTTTTGCATGCCGCTGTCGAAGTCGGC TTCCGCGTAGGTGTGGTCGTCGTGTCGGCGGCGGCGGCGGCGGCGGGAGGAGGAACGAGG AGGACACATGGAGCACGGGAGCATCATCGCGTCGGCCGTGGGGGTGGGCGTCGGGGTGGG GGTCGGCATCGGCCTCGTCTCGTCGCGGCTGACCGGGTTGGCGACTGGCGGCGGCGCCAC GGCGGCGGAGGTGGAGGCGGAGCTGCGGTGTCTGGTGGTGGACGGCCGCGACGTCGGCGT CTCCTTCGACGACTTCCCGTACTACCTCAGCGAGCAGTCGAAGCTGGCCCTCACCAGCAC GGCGTTCGTGCATCTGAGCCCAACGATCCTGCCCAATCACATCCGCGTCCTCTCCGCGTC CAGCCGCACCATACTGCTCTGCGGCCCATCAGAGGCGTACCTTCAGTCGCTCGCGAAGGC TCTCGCAAACCAGTTCAGTGCTCGCCTGCTGCTGCTCGATGTCATCGACTTCGCGTGCAA GCTCCATCATAAGTACGGCGGTCCAAGCAATACACAGACCCGTGAGAGATCCATGACAGA GGCAGCCTTCGATAGAGTGTCTAGTTTGGTTGGAGCTTTCAATCTGTTTCGCAAGAAGGA AGAACCAACTGGAACAGGACCATTGAGCCGTGAAACAGGCATCCTTGATCTCAGGACTAG CACTTGTTGTCCTCATAACACACCTTCAGTACGGGTTCAGTTATCCTTGGTACCTCCCGA GAAGGACCATGATCCCGAATCTTCTAAATACCTTGCATCAGTTAAACCATGCTGGAGTTT GAATGAGAAGGTTCTCATACAATCCCTTTACAAGATTATAGTTTCTGCTTCTGAAATCAG TCCAGTCATTCTTTACATAAGGGATGTTGATGACTTGCTTGGAAGTTCAGAAAAAGCATA CTGTATGTTTCAGAAAATGTTGAAAAAACTATCTGGACGGGTAATCGTGATTGGTTCACA ATTCCTCGATGATGATGAGGATAGAGAAGATATTGAAGAATCTGTGTGTGCTCTTTTCCC TTGTATTCTGGAGACAAAGCCTCCCAAAGACAAGGTCCTTCTTGAGAAATGGAAGACCCA GATGGAGGAAGATTCGAATAATAACAATAATCAAGTCGTTCAAAACTACATCGCGGAAGT GCTCGCAGAAAACAATCTTGAGTGTGAAGATTTGAGCTCGATCAATGCAGATGATGATTG TAAAATCATTGTGGCTTACTTAGAAGAAATTATAACCCCATCTGTCTCTTACCATCTGAT GAATAACAAGAACCCTAAATACAGAAACGGGAATCTTGTCATATCTTCGGAGAGCTTATC CCATGGATTACGCATATTCCAAGAGAGCAACGACCTTGGGAAAGATACAGTGGAAGCAAA GGATGAGACAGAGATGGTCGTTCCAGACAATGAGTATGAAAAGAAGATCCGACCAACGGT TATACCAGCCAATGAAATAGGAGTGACATTTGATGACATTGGAGCACTGGCTGATATCAA AGAATGCCTTCACGAGCTTGTCATGCTTCCTCTTCAACGACCTGATTTCTTCAAAGGTGG TCTCTTGAAGCCATGCAAGGGCGTTCTGCTGTTTGGGCCACCTGGTACGGGGAAAACAAT GCTCGCCAAGGCCCTAGCAAACGCAGCAGGAGCTAGCTTCTTGAACATCTCTATGGCTAG TATGACATCAAAATGGTACGGGGAGTCTGAGAAGTGCATCCAAGCCTTATTCAGCCTTGC TGCTAAACTTGCACCAGCAATCATTTTCATCGATGAGGTAGACAGCATGCTAGGGAAACG AGATAACCATAGCGAAAATGAGGCATCCCGCAGAGTAAAAAATGAGTTCATGGCTCACTG GGATGGACTCTTGTCTAAGTCCAACGAAAGGATATTAGTCCTTGCTGCAACGAACAGGCC CTTTGACCTTGATGATGCGGTGATAAGGAGATTTGAGCACAGAATCATGGTCGGCCTCCC AACGTTGGAGAGTAGAGAGCTGATTCTGAAGACATTGTTGTCGAAAGAGACGGTTGAAAA TATTGATTTCAAGGAGCTTGCCAAAATGACTGAAGGATACACCAGCAGTGACTTGAAGAA TATTTGCGTGACGGCAGCTTATCATCCTGTCAGAGAGCTACTTCAGAAAGAAAAGAACAA GGTCAAGAAGGAAACTGCACCAGAAACGAAGCAAGAACCAAAAGAAAAGACCAAAATTCA AGAAAACGGGACAAAAAGTTCGGATAGTAAGACTGAAAAGGACAAGCTTGACAACAAGGA AGGTAAGAAAGACAAGCCTGCTGACAAGAAAGATAAATCAGACAAAGGCGATGCTGGAGA GACTACCCTGAGACCGCTAAACATGGAGGACTTGAGAAAGGCAAAGGATGAAGTCGCCGC TAGCTTCGCTAGCGAAGGCGTTGTGATGAATCAGATCAAGGAATGGAATGAGCTCTACGG CAAAGGCGGGTCGAGGAAGCGGGAGCAACTGACATACTTCTTGTAGTGAAGAATTCATTA CTTGTATATACATTTGTAGTGTTTGTGGTTGGCATCTGGCCCCCGGATGACTGGATGTAC TGAAGCAGAGAAGAACATAGGGAAAAAAGAGGCATTTAGGAGTAGTAGTCGTCAGACCCG ATAATTTGATTGTCATTCCCTAGTTGATTTATTGAATAATAATGCTGAACCTTCTTGATT CGGGAATACAATTGGTCGATTACTGATT