Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os01t0622700-02
CDS Infomation	cds chromosome:IRGSP-1.0:1:24843748:24846749:-1 gene:Os01g0622700 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Protein ABIL1. (Os01t0622700-01);Similar to Protein ABIL1. (Os01t0622700-02)
Sequence	ATGCAGCAGCAGCAGGCGTGGGCGGCGGGGCTTGGCGGCCTCGCGGTCGCCGGGGTCGGG GAGGAGGGCGGCGGGGGAGGTCCCGCTCCCACCACCGTCGACGAGGCGTCCATGGAGCGG AGCAAGAGCTTCGTCAAGGCGCTCCAGGAGCTCAAGAACCTGCGGCCGCAGCTCTACTCG GCGTCGGAGTACTGCGAGAAGTCGTACCTCCACAGCGAGCAGAAGCAGATGGTTCTAGAC AACTTGAAGGATTATGCTGTGAGGGCTTTGGTGAATGCGGTTGACCACCTTGGCACAGTT GCCTACAAACTGACAGACCTGTATGAACAACAGGCTTCAGAAGTTTCCACTCTTGAGCTG AAAGTAGCATGCTTGAACCAGCAAGTCCTCACCTGCCAAACTTACACGGATAAAGAAGGC ATTAGGCAGCAGCAGATGACCGGAACCGCCACAAGACATCACAAACATTACATTGTACCG ACTTTGGCGAACAAAAGAATGCAGGCTTTCTCTGAGATGCAAACTGATGCTGATATTGAC TCAAGGCCTAGACCTTATCCCTCAGCAAAAACCCTTTTCTGGCATTTGGCTTCAGAGAAA AACTCCAAAACCAATGGAGCACGCCAATCTGAATTTGTCCTAGAAGAAACAAAGGCTACA AAACCTGCATCGAGAGGTAAGGAACCATCAACATCTCCATTGCCCAAGCATCTGCAGACA AACTTGGCCAGCTCTGATTTTGCTATGCATAATGTTGGCATGAAGGATCAACCTGGTGTC AGGCATCTATCGTCATTTAGTTCTTTTGACAACCCAAGAGGGCGTCAAATCCAAAAGGCT CCCCTCCGTACCAAAAGTATGCTAGCTGCTTTCTTTGTCAAGCACAAGTCGGGAAAGATG AAAAACGTTTCTGTTCGTTGA

Peptide Sequence

PEP ID	Os01t0622700-02
PEP Infomation	pep chromosome:IRGSP-1.0:1:24843748:24846749:-1 gene:Os01g0622700 transcript:Os01t0622700-02 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Protein ABIL1. (Os01t0622700-01);Similar to Protein ABIL1. (Os01t0622700-02)
Sequence	MQQQQAWAAGLGGLAVAGVGEEGGGGGPAPTTVDEASMERSKSFVKALQELKNLRPQLYS ASEYCEKSYLHSEQKQMVLDNLKDYAVRALVNAVDHLGTVAYKLTDLYEQQASEVSTLEL KVACLNQQVLTCQTYTDKEGIRQQQMTGTATRHHKHYIVPTLANKRMQAFSEMQTDADID SRPRPYPSAKTLFWHLASEKNSKTNGARQSEFVLEETKATKPASRGKEPSTSPLPKHLQT NLASSDFAMHNVGMKDQPGVRHLSSFSSFDNPRGRQIQKAPLRTKSMLAAFFVKHKSGKM KNVSVR

Transcript Sequence

Transcript ID	Os01t0622700-02
Transcript Infomation	cdna chromosome:IRGSP-1.0:1:24843748:24846749:-1 gene:Os01g0622700 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Protein ABIL1. (Os01t0622700-01);Similar to Protein ABIL1. (Os01t0622700-02)
Sequence	AATCTCGCTACCGCCATCCGCCAAGCGAAGCGAAGCGAAGCATTGACTCCTACTCCTACT ACGAGCGGCTTAAAGTGACCAGTAACCACCACCACCACGCCGCGGCCGCCGTCGCCATCC GCGCGCGCCCCCACCTGCCTCCGCTCCCACTCGCGCACGCGGCCACCACCCCCACCGATA CGCTTCTCCTGCCTGCCTGCCTGCTGCTGCTGCCGCGCGCCGGCAGGGAGAGGAGAGGAG GAGGAGCATCGCTTCCTTGCTTCCTCCTCACGTGCCTTGCCCCCGCCGCTAAGTAGCCGG CTTCCTACCGAACAAGAACTGCAGCGAGCGACTCGGGAGGAGGAAGGCGAGGGGATATGC AGCAGCAGCAGGCGTGGGCGGCGGGGCTTGGCGGCCTCGCGGTCGCCGGGGTCGGGGAGG AGGGCGGCGGGGGAGGTCCCGCTCCCACCACCGTCGACGAGGCGTCCATGGAGCGGAGCA AGAGCTTCGTCAAGGCGCTCCAGGAGCTCAAGAACCTGCGGCCGCAGCTCTACTCGGCGT CGGAGTACTGCGAGAAGTCGTACCTCCACAGCGAGCAGAAGCAGATGGTTCTAGACAACT TGAAGGATTATGCTGTGAGGGCTTTGGTGAATGCGGTTGACCACCTTGGCACAGTTGCCT ACAAACTGACAGACCTGTATGAACAACAGGCTTCAGAAGTTTCCACTCTTGAGCTGAAAG TAGCATGCTTGAACCAGCAAGTCCTCACCTGCCAAACTTACACGGATAAAGAAGGCATTA GGCAGCAGCAGATGACCGGAACCGCCACAAGACATCACAAACATTACATTGTACCGACTT TGGCGAACAAAAGAATGCAGGCTTTCTCTGAGATGCAAACTGATGCTGATATTGACTCAA GGCCTAGACCTTATCCCTCAGCAAAAACCCTTTTCTGGCATTTGGCTTCAGAGAAAAACT CCAAAACCAATGGAGCACGCCAATCTGAATTTGTCCTAGAAGAAACAAAGGCTACAAAAC CTGCATCGAGAGGTAAGGAACCATCAACATCTCCATTGCCCAAGCATCTGCAGACAAACT TGGCCAGCTCTGATTTTGCTATGCATAATGTTGGCATGAAGGATCAACCTGGTGTCAGGC ATCTATCGTCATTTAGTTCTTTTGACAACCCAAGAGGGCGTCAAATCCAAAAGGCTCCCC TCCGTACCAAAAGTATGCTAGCTGCTTTCTTTGTCAAGCACAAGTCGGGAAAGATGAAAA ACGTTTCTGTTCGTTGATCAATTTCAAGCCTCCAGTTTGTCCAGCCCTGTCACAACGAAG TACAACCACGGAATTCAGATTACATCTACAATATGTCTGTGTCTTGTATATTAGTGCTCT AGAGATGAATCTTTTGGATAAAGTTTTTATATCTTAATGTTAATGTCATCTTTCTGATGA CTTAAATGTTTAATATATGGGTATAGAATAACAGTTTTCAGTATAAGTGGATGTAAAAGG AGTATGTCAACCATCATTTTCATTCATGTAGATTGTATGATGTGTTTGTACAGAAGAAAA AAAAAGCCAAAAAAGAAAAGCAGACTACTG