Gene sequences

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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os01t0622300-01
CDS Infomation	cds chromosome:IRGSP-1.0:1:24823998:24828139:-1 gene:Os01g0622300 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Plastid uroporphyrinogen decarboxylase (Fragment). (Os01t0622300-01)
Sequence	ATGATCTCCGCGACGGCCACCGCCGCCTTCCTCGCCGCGGCGCCGGCCTCCTCCTCCTCC TGCACCACCCACCGCCGGCGCAGCGGCCTTCCCGCCATCTCCGCGTCCCTCGCAACCGCC TCCTCCACTGAGGAGCCGCTGCTGGTGCGGGCGGCGAGGGGCGAGGACGGGCTGCCGCGG CCGCCGGCGTGGATGATGCGGCAGGCCGGGCGGTACATGGCGGAGTACCAGGCGCTCGCC AAGCGCCACCCCTCGTTCCGGGAGCGGTCCGAGACGACCGAACTCATCGTCGAGATCACG CTGCAACCGTGGCGCGCCTTCGCGCCCGACGGCGTCATCCTGTTCTCGGACATACTCACG CCGCTGCCGGCCATTGGGGTGCCATTCGATATCTCCGACTCCAAGGGGCCTGTGATCCAG TCTCCCGTGAGGTCCGAGGAGCAGGTGAGGGAGCTCACCCCCATTGACTTCGAGAAGCTC CGGTTCGTCGGTGAGTCGCTCAAGATTCTACGCACTGAGATTGATGGACAAGCTGCTTTG CTAGGATTTGTGGGGGCCCCATGGACAATTGCAACTTATGTTGTTGAAGGGGGGATGACC AACACTTACACAAATATAAAGAGCATGTGCCACACAGCACCAAATGTGTTAAGGGGACTT TTGTCTCACCTTGCAGACGCCATATCTGAATACATTATTTACCAAGTAAACTCTGGGGCT CAATGTATACAAATATTTGATTCATGGGGTGGACAACTTCCACCTCATGTGTGGGAGCAG TGGTCAAAACCATATATCAAGCAGATTGTGAATAAGATTAAGATTGAATGCCCCAATGTA CCACTTGTTCTCTATATAAATGGAAATGGAGGCTTGCTTGAGCGAATGACGGACACAGGA GTCGATGTTATTGGTCTTGACTGGACAGTGGATATGGCAGATGGAAGGAGACGCCTTGGT AACAAAATTAGTGTACAGGGGAATGTTGACCCAGCATTTCTATTTTCTCCATTACCAGTA CTGACCGATGAAATTCATAGGGTTGTCAAATCAGCTGGTCCAAAAGGTCATATACTAAAC TTGGGCCATGGTGTTCTTGTAAAAACACCAGAAGAAGCTGTAGCTCATTTCTTTGATGTC ACGAGGAGCTTGAGATATGACACACTTTTCCAAGGTTGTGTTACTGAAGTTTTGGAGCCT GTTGCTTAA

Peptide Sequence

PEP ID	Os01t0622300-01
PEP Infomation	pep chromosome:IRGSP-1.0:1:24823998:24828139:-1 gene:Os01g0622300 transcript:Os01t0622300-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Plastid uroporphyrinogen decarboxylase (Fragment). (Os01t0622300-01)
Sequence	MISATATAAFLAAAPASSSSCTTHRRRSGLPAISASLATASSTEEPLLVRAARGEDGLPR PPAWMMRQAGRYMAEYQALAKRHPSFRERSETTELIVEITLQPWRAFAPDGVILFSDILT PLPAIGVPFDISDSKGPVIQSPVRSEEQVRELTPIDFEKLRFVGESLKILRTEIDGQAAL LGFVGAPWTIATYVVEGGMTNTYTNIKSMCHTAPNVLRGLLSHLADAISEYIIYQVNSGA QCIQIFDSWGGQLPPHVWEQWSKPYIKQIVNKIKIECPNVPLVLYINGNGGLLERMTDTG VDVIGLDWTVDMADGRRRLGNKISVQGNVDPAFLFSPLPVLTDEIHRVVKSAGPKGHILN LGHGVLVKTPEEAVAHFFDVTRSLRYDTLFQGCVTEVLEPVA

Transcript Sequence

Transcript ID	Os01t0622300-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:1:24823998:24828139:-1 gene:Os01g0622300 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Plastid uroporphyrinogen decarboxylase (Fragment). (Os01t0622300-01)
Sequence	AAGCAGGATTAGATAAGCAAAACAGCCACCTAAGCCCACGCCGCGAAGTCGCCGCCACCG CCATGATCTCCGCGACGGCCACCGCCGCCTTCCTCGCCGCGGCGCCGGCCTCCTCCTCCT CCTGCACCACCCACCGCCGGCGCAGCGGCCTTCCCGCCATCTCCGCGTCCCTCGCAACCG CCTCCTCCACTGAGGAGCCGCTGCTGGTGCGGGCGGCGAGGGGCGAGGACGGGCTGCCGC GGCCGCCGGCGTGGATGATGCGGCAGGCCGGGCGGTACATGGCGGAGTACCAGGCGCTCG CCAAGCGCCACCCCTCGTTCCGGGAGCGGTCCGAGACGACCGAACTCATCGTCGAGATCA CGCTGCAACCGTGGCGCGCCTTCGCGCCCGACGGCGTCATCCTGTTCTCGGACATACTCA CGCCGCTGCCGGCCATTGGGGTGCCATTCGATATCTCCGACTCCAAGGGGCCTGTGATCC AGTCTCCCGTGAGGTCCGAGGAGCAGGTGAGGGAGCTCACCCCCATTGACTTCGAGAAGC TCCGGTTCGTCGGTGAGTCGCTCAAGATTCTACGCACTGAGATTGATGGACAAGCTGCTT TGCTAGGATTTGTGGGGGCCCCATGGACAATTGCAACTTATGTTGTTGAAGGGGGGATGA CCAACACTTACACAAATATAAAGAGCATGTGCCACACAGCACCAAATGTGTTAAGGGGAC TTTTGTCTCACCTTGCAGACGCCATATCTGAATACATTATTTACCAAGTAAACTCTGGGG CTCAATGTATACAAATATTTGATTCATGGGGTGGACAACTTCCACCTCATGTGTGGGAGC AGTGGTCAAAACCATATATCAAGCAGATTGTGAATAAGATTAAGATTGAATGCCCCAATG TACCACTTGTTCTCTATATAAATGGAAATGGAGGCTTGCTTGAGCGAATGACGGACACAG GAGTCGATGTTATTGGTCTTGACTGGACAGTGGATATGGCAGATGGAAGGAGACGCCTTG GTAACAAAATTAGTGTACAGGGGAATGTTGACCCAGCATTTCTATTTTCTCCATTACCAG TACTGACCGATGAAATTCATAGGGTTGTCAAATCAGCTGGTCCAAAAGGTCATATACTAA ACTTGGGCCATGGTGTTCTTGTAAAAACACCAGAAGAAGCTGTAGCTCATTTCTTTGATG TCACGAGGAGCTTGAGATATGACACACTTTTCCAAGGTTGTGTTACTGAAGTTTTGGAGC CTGTTGCTTAACAATGGCCAATTGTCAGATATTTTTTTTAATCAGCTGATCCATGGTGTA CCATCGTAGTTTTGTCTGCAAGCTATGTTGCTCCTTTTGTTGGCCATGTCTTTGTAGGAA TATCACGATTCGTGACCAGGTCAATTCAATTTTATTCATTACTCTTAATAGCTGTATTCC TTCATCCATCCACAAAACAAAAACAAAAAGGCATGCCACCTGGTTTTACAAGAAAAGCCA GAGTAGGTTCAAGGTGTTTTGTCCATTTGTCTTTCTTGAGT