Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os01t0619000-02
CDS Infomation	cds chromosome:IRGSP-1.0:1:24633776:24639213:-1 gene:Os01g0619000 gene_biotype:protein_coding transcript_biotype:protein_coding description:RNA recognition motif domain domain containing protein. (Os01t0619000-01);Similar to predicted protein. (Os01t0619000-02)
Sequence	ATGGCTTCCGGGCAGCCGCAGTTCAGGTACACGCAGCCGCCGTCGAAGGTGATCCACCTG AGGAACCTGCCGTGGGACTGCACGGAGGAGGAGCTGGTCGAGCTCGGGAGCCCCTTCGGC AAGGTCGTCAACACGAAATGCAACGTCGGCGCCAACCGGAACCAGGCCTTCGTCGAATTC GCTGACCAAAATCAGGCAATTGCTATGATATCATATTTTGCATCATCAGCTGAGCCTGCA CAGGTAAGAGGGAAAAATGTGTACCTTCAGTACTCCAATAGACAAGAGATTGTCAACAGC AAGAGTTCAGGGGAAGCTGCAGGCAATGTTTTGCTAGTGTCGATGGAAGGTGTTCTGCCA GATGCTGTGAGCATCGATGTTCTACACCTGGTATTTTCTGCTTTTGGCTTTGTTCAAAAG ATTGCCACCTTTGAGAAGGCATCTGGTTATCAGGCATTGATACAGTTCTGTGATACTGAA ACTGCATCATCTGCCAAAGCTGCTCTGGATGGTAGATGCATTCCTAGCTATTTGCTTCCA GAACTTGATGTGCCTTGCACTTTGAGAATAAATTATTCAGCACATACTGTTCTAAATGTC AAGTTTCAAAGTCACAGGAGTAGAGACTACACTAATCCGTACCTTCCGGTTGCTCCTTCT GCTATAGATGGATCTGGACCGGATGGGAAGAAGCAGGAAGCAGAGAGCAACGTTCTGCTT GCATCTGTTGAGAACATGCAGTATGTTGTTACAATAGATGTGCTTCACGAGGTCTTTTCT GCTTTTGGTTTTGTGCAAAAGATTGCTATCTTTGAGAAGAACTCTGGCTTCCAGGCATTA ATCCAGTATCCAGATATTCAAACCGCAGTTGCAGCAAAAGAAGCATTAGAAGGGCACAGC ATCTATGAAGGTGGATATTGCAAGCTTCATCTCACATTTTCGCGCCATACCGATCTTAAT GTTAAGGTTAACAATGAGCGTGGTAGAGATTACACTGGAGGGAACACTGCACCGACCAGC AATCAACCTTCCATTCTTGGTCCTCAACCAGTATATTCCGGTGCTTACAACAACGCTCCT TCGTCAGCGACTGGTGCAGTAGTGCCACCAGGGACTACTCTCACTCCACCTGGAGCACCA TCTCATCCTTACACATCCAGCGAGCCGCTTCCGCAAACTCCTGCCGTTCCCTCTGGTGGA GCTCCGCTGTACACTAGCCAGGGAATTCTTCAAGGCCCCCCTGGTGTTCCTCCTGCACAA TTTCCAGGCTATGGATCTCCACAGTTTCCCCCAGGCTCAGCTCAAGCTCAAATGCATCAA CAACATCCAGTCCAGGGAAGCCAGCAGATGCCTGGCCAAATGAACCATCAACCACCTCCA GGATCGTTCATGCAGTACCCTGGCGACGGAGGCCGTCCAGTTCAAGACGCACCTGGGCAA CAAGCAATGCCGTTCCATGGCCATGGAGGAGGGCAGCATCTACCTCCAGGCTATGGAGGC CAGCCGCAGTTTCAGCAAGGTCCAAGGCCACCTATGCCGCCGCAGCAGTTTCCGATGTAC GGCGACCAGCAGTTTCCTCCTGGTACGGGGCCCCAGATGATGATGCCCTTTGCTGGGCAG GGAGGAGGCCAGCAGCACCCGTTTCGCCCTTATAACAGCCATTAG

Peptide Sequence

PEP ID	Os01t0619000-02
PEP Infomation	pep chromosome:IRGSP-1.0:1:24633776:24639213:-1 gene:Os01g0619000 transcript:Os01t0619000-02 gene_biotype:protein_coding transcript_biotype:protein_coding description:RNA recognition motif domain domain containing protein. (Os01t0619000-01);Similar to predicted protein. (Os01t0619000-02)
Sequence	MASGQPQFRYTQPPSKVIHLRNLPWDCTEEELVELGSPFGKVVNTKCNVGANRNQAFVEF ADQNQAIAMISYFASSAEPAQVRGKNVYLQYSNRQEIVNSKSSGEAAGNVLLVSMEGVLP DAVSIDVLHLVFSAFGFVQKIATFEKASGYQALIQFCDTETASSAKAALDGRCIPSYLLP ELDVPCTLRINYSAHTVLNVKFQSHRSRDYTNPYLPVAPSAIDGSGPDGKKQEAESNVLL ASVENMQYVVTIDVLHEVFSAFGFVQKIAIFEKNSGFQALIQYPDIQTAVAAKEALEGHS IYEGGYCKLHLTFSRHTDLNVKVNNERGRDYTGGNTAPTSNQPSILGPQPVYSGAYNNAP SSATGAVVPPGTTLTPPGAPSHPYTSSEPLPQTPAVPSGGAPLYTSQGILQGPPGVPPAQ FPGYGSPQFPPGSAQAQMHQQHPVQGSQQMPGQMNHQPPPGSFMQYPGDGGRPVQDAPGQ QAMPFHGHGGGQHLPPGYGGQPQFQQGPRPPMPPQQFPMYGDQQFPPGTGPQMMMPFAGQ GGGQQHPFRPYNSH

Transcript Sequence

Transcript ID	Os01t0619000-02
Transcript Infomation	cdna chromosome:IRGSP-1.0:1:24633776:24639213:-1 gene:Os01g0619000 gene_biotype:protein_coding transcript_biotype:protein_coding description:RNA recognition motif domain domain containing protein. (Os01t0619000-01);Similar to predicted protein. (Os01t0619000-02)
Sequence	AGGCCTCAGATTTGACCCGCACCGATACGGACAGAGGAGAGAGAAATCGAAGCCGTCTTC CTCCGCTCCGGCATCTCGCCTCTTCCCATCGCCGCCACCGCCGGCGGTCGCAGACTCGCA GCTCTCGCAAAGATTGACGGGCGAGGAAGCGAGGAGGCGTATCTTGGGTGGGTGCGGGGA TGGCTTCCGGGCAGCCGCAGTTCAGGTACACGCAGCCGCCGTCGAAGGTGATCCACCTGA GGAACCTGCCGTGGGACTGCACGGAGGAGGAGCTGGTCGAGCTCGGGAGCCCCTTCGGCA AGGTCGTCAACACGAAATGCAACGTCGGCGCCAACCGGAACCAGGCCTTCGTCGAATTCG CTGACCAAAATCAGGCAATTGCTATGATATCATATTTTGCATCATCAGCTGAGCCTGCAC AGGTAAGAGGGAAAAATGTGTACCTTCAGTACTCCAATAGACAAGAGATTGTCAACAGCA AGAGTTCAGGGGAAGCTGCAGGCAATGTTTTGCTAGTGTCGATGGAAGGTGTTCTGCCAG ATGCTGTGAGCATCGATGTTCTACACCTGGTATTTTCTGCTTTTGGCTTTGTTCAAAAGA TTGCCACCTTTGAGAAGGCATCTGGTTATCAGGCATTGATACAGTTCTGTGATACTGAAA CTGCATCATCTGCCAAAGCTGCTCTGGATGGTAGATGCATTCCTAGCTATTTGCTTCCAG AACTTGATGTGCCTTGCACTTTGAGAATAAATTATTCAGCACATACTGTTCTAAATGTCA AGTTTCAAAGTCACAGGAGTAGAGACTACACTAATCCGTACCTTCCGGTTGCTCCTTCTG CTATAGATGGATCTGGACCGGATGGGAAGAAGCAGGAAGCAGAGAGCAACGTTCTGCTTG CATCTGTTGAGAACATGCAGTATGTTGTTACAATAGATGTGCTTCACGAGGTCTTTTCTG CTTTTGGTTTTGTGCAAAAGATTGCTATCTTTGAGAAGAACTCTGGCTTCCAGGCATTAA TCCAGTATCCAGATATTCAAACCGCAGTTGCAGCAAAAGAAGCATTAGAAGGGCACAGCA TCTATGAAGGTGGATATTGCAAGCTTCATCTCACATTTTCGCGCCATACCGATCTTAATG TTAAGGTTAACAATGAGCGTGGTAGAGATTACACTGGAGGGAACACTGCACCGACCAGCA ATCAACCTTCCATTCTTGGTCCTCAACCAGTATATTCCGGTGCTTACAACAACGCTCCTT CGTCAGCGACTGGTGCAGTAGTGCCACCAGGGACTACTCTCACTCCACCTGGAGCACCAT CTCATCCTTACACATCCAGCGAGCCGCTTCCGCAAACTCCTGCCGTTCCCTCTGGTGGAG CTCCGCTGTACACTAGCCAGGGAATTCTTCAAGGCCCCCCTGGTGTTCCTCCTGCACAAT TTCCAGGCTATGGATCTCCACAGTTTCCCCCAGGCTCAGCTCAAGCTCAAATGCATCAAC AACATCCAGTCCAGGGAAGCCAGCAGATGCCTGGCCAAATGAACCATCAACCACCTCCAG GATCGTTCATGCAGTACCCTGGCGACGGAGGCCGTCCAGTTCAAGACGCACCTGGGCAAC AAGCAATGCCGTTCCATGGCCATGGAGGAGGGCAGCATCTACCTCCAGGCTATGGAGGCC AGCCGCAGTTTCAGCAAGGTCCAAGGCCACCTATGCCGCCGCAGCAGTTTCCGATGTACG GCGACCAGCAGTTTCCTCCTGGTACGGGGCCCCAGATGATGATGCCCTTTGCTGGGCAGG GAGGAGGCCAGCAGCACCCGTTTCGCCCTTATAACAGCCATTAGCTGCTCTGTTGATTCA GTCTTACGTTACATGTCATATACGATGCATGTACTTTTGCCTCTCTGCCGCCATTTTGTT GTGAGGTATGGCACAGTAGTTGATGCTGTGGAATCGTTTGGTGGAGAGATGTGGTAGAAA CTACTAGTTTAACAATCCAGAATTTCTCTGATTAATGATGAGTTGCTGAGCACTGTC