Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os01t0618400-01
CDS Infomation	cds chromosome:IRGSP-1.0:1:24598181:24601809:1 gene:Os01g0618400 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:DEAD-box ATP-dependent RNA helicase 25, RNA helicase 25 description:Similar to RNA helicase (Fragment). (Os01t0618400-01)
Sequence	ATGGCCGCCGGCGACCTCCTCCTCCGCACCCAGAGCGGCCTCCCCGTGCTCGCAAGGGCC TTCCCCAGCTGCCTCTGCCTCCGCGTCCCTGCCCGCCGCCGCCGGGGCGCTCCTCCCCTG ACCGCCGCCAAGGTCGACGTCGCCGACGCCGTCGGCCGCCGTGTCAGGTCGGGCGGCGCG GCCGTACCGAAGCGGCGTCGTAGCCGTAGGGACGCGGAGGAGGAGGAGGAGGAGGGCCTC GCGTTCTCGAGGGTGGTCACGGGCAGGGGAAGAGGCGTCCGCGAGGAGGGCGTGGCGGAA GGGGAGGCTCCGGAATTCGATGCGGCGAAGAGCGGTGACGAGTCGGGAGGCGTGGATGGC TCGTACCTCAGCGACACAAGGTTTGATCAATGCACTATTTCTCCGTTGTCACTGAAAGCC GTCAAAGATGCTGGGTATGAAAGGATGACCCAGGTGCAGGAGGCAACTCTGCCAGTAATC CTTCAAGGTAAAGATGTTCTTGCAAAAGCAAAGACAGGAACTGGGAAAACTGTTGCCTTT TTGCTTCCAGCCATTGAAGTTCTCTCCGCATTACCTAATTCTCGGAGGGATCAACTACGT CCATCTATAAATTTGCTGGTGATGTGCCCTACTAGGGAGCTTGCAATCCAAGTGGCTGTT GAGGCCAAGAAACTTCTCAAGTATCACCGCTCGCTGGGGGTGCAAGTTGTAATCGGTGGC ACACGATTAACCCAAGAGCAACGAAGCATGCAAGCTAACCCATGCCAGATTCTTGTTGCT ACACCTGGAAGGCTTAAAGACCATGTTGAGAACACACCTGGTTTTTCTACCCGACTAAAA GGTGTGAAGGTTCTTGTTCTTGATGAAGCTGATCGCCTGCTGGATATGGGATTCAGAAGA GACATTGAGAGAATAATTGCTTCCGTTCCTAAAGAGCGACAGACATTGCTATTTTCTGCT ACTGTGCCAGAGGAGGTCCGCCAAATTTCTCATATTGCAATGAAGAAGAATTATAAGTTC ATTAACACTGTTAAGGATGGTGATGAGGAGACACATGCACAGGTGAGTCAGATGTTCATG ATCGCGCCACTAGATCTGCACTTCTCTATCTTATATGATGTATTGAAGAAGCATGTTGCA GAGGATGCAGACTACAAAGTGATTATATTCTGCACTACTGCGATGGTTACCAAACTTGTC GCTGAAATTCTTTCCCAACTGAGACTGAATATAAGAGAGATTCATTCCAGAAAGTCACAA TCTGCCAGAACTAAGGTCTCAGATGAATTCAGGAAGTCAAGGGGTCTGATATTGGTTAGT TCTGATGTATCTGCCCGCGGCGTGGATTATCCTGATGTCACCCTTGTCATACAGGTTGGG GTGCCAGCTGATAGACAGCAATATATACATAGACTTGGTAGAACTGGACGGAAGGGAAAG GAAGGGCAAGGCCTATTACTGTTGGCTCCATGGGAGAAGTACTTTCTTAGTAGCATTAAG GATTTGTCAATATCAGAGGCTACGGTACCTTCTGTTGATTCAAGCACTCAGACAATAGTC AAAGACGCAGTCCGGAAAGTTGAGATGAGGAGCAAGGAGTGTGCCTATCAAGCATGGTTA GGATACTACAACTCTAACAAGACCATTGGCCGAGAAAAATCCAGACTTGTTAAGCTCGCA GAAGAGTTCAGCCAAAGCATGGAGCTTTCAGTTCCGCCAGCTATACCCAAGCAAATTCTT CGAAAGATGGGACTTAACAATGTTCCTGGGCTGAGATCTACATAA

Peptide Sequence

PEP ID	Os01t0618400-01
PEP Infomation	pep chromosome:IRGSP-1.0:1:24598181:24601809:1 gene:Os01g0618400 transcript:Os01t0618400-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:DEAD-box ATP-dependent RNA helicase 25, RNA helicase 25 description:Similar to RNA helicase (Fragment). (Os01t0618400-01)
Sequence	MAAGDLLLRTQSGLPVLARAFPSCLCLRVPARRRRGAPPLTAAKVDVADAVGRRVRSGGA AVPKRRRSRRDAEEEEEEGLAFSRVVTGRGRGVREEGVAEGEAPEFDAAKSGDESGGVDG SYLSDTRFDQCTISPLSLKAVKDAGYERMTQVQEATLPVILQGKDVLAKAKTGTGKTVAF LLPAIEVLSALPNSRRDQLRPSINLLVMCPTRELAIQVAVEAKKLLKYHRSLGVQVVIGG TRLTQEQRSMQANPCQILVATPGRLKDHVENTPGFSTRLKGVKVLVLDEADRLLDMGFRR DIERIIASVPKERQTLLFSATVPEEVRQISHIAMKKNYKFINTVKDGDEETHAQVSQMFM IAPLDLHFSILYDVLKKHVAEDADYKVIIFCTTAMVTKLVAEILSQLRLNIREIHSRKSQ SARTKVSDEFRKSRGLILVSSDVSARGVDYPDVTLVIQVGVPADRQQYIHRLGRTGRKGK EGQGLLLLAPWEKYFLSSIKDLSISEATVPSVDSSTQTIVKDAVRKVEMRSKECAYQAWL GYYNSNKTIGREKSRLVKLAEEFSQSMELSVPPAIPKQILRKMGLNNVPGLRST

Transcript Sequence

Transcript ID	Os01t0618400-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:1:24598181:24601809:1 gene:Os01g0618400 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:DEAD-box ATP-dependent RNA helicase 25, RNA helicase 25 description:Similar to RNA helicase (Fragment). (Os01t0618400-01)
Sequence	GTCGCCGCGCGCCAACCCGCCACAAAACCCTACGCCTCCGCTCATCCCTATCCCCACTCG CCGGAGATGGCCGCCGGCGACCTCCTCCTCCGCACCCAGAGCGGCCTCCCCGTGCTCGCA AGGGCCTTCCCCAGCTGCCTCTGCCTCCGCGTCCCTGCCCGCCGCCGCCGGGGCGCTCCT CCCCTGACCGCCGCCAAGGTCGACGTCGCCGACGCCGTCGGCCGCCGTGTCAGGTCGGGC GGCGCGGCCGTACCGAAGCGGCGTCGTAGCCGTAGGGACGCGGAGGAGGAGGAGGAGGAG GGCCTCGCGTTCTCGAGGGTGGTCACGGGCAGGGGAAGAGGCGTCCGCGAGGAGGGCGTG GCGGAAGGGGAGGCTCCGGAATTCGATGCGGCGAAGAGCGGTGACGAGTCGGGAGGCGTG GATGGCTCGTACCTCAGCGACACAAGGTTTGATCAATGCACTATTTCTCCGTTGTCACTG AAAGCCGTCAAAGATGCTGGGTATGAAAGGATGACCCAGGTGCAGGAGGCAACTCTGCCA GTAATCCTTCAAGGTAAAGATGTTCTTGCAAAAGCAAAGACAGGAACTGGGAAAACTGTT GCCTTTTTGCTTCCAGCCATTGAAGTTCTCTCCGCATTACCTAATTCTCGGAGGGATCAA CTACGTCCATCTATAAATTTGCTGGTGATGTGCCCTACTAGGGAGCTTGCAATCCAAGTG GCTGTTGAGGCCAAGAAACTTCTCAAGTATCACCGCTCGCTGGGGGTGCAAGTTGTAATC GGTGGCACACGATTAACCCAAGAGCAACGAAGCATGCAAGCTAACCCATGCCAGATTCTT GTTGCTACACCTGGAAGGCTTAAAGACCATGTTGAGAACACACCTGGTTTTTCTACCCGA CTAAAAGGTGTGAAGGTTCTTGTTCTTGATGAAGCTGATCGCCTGCTGGATATGGGATTC AGAAGAGACATTGAGAGAATAATTGCTTCCGTTCCTAAAGAGCGACAGACATTGCTATTT TCTGCTACTGTGCCAGAGGAGGTCCGCCAAATTTCTCATATTGCAATGAAGAAGAATTAT AAGTTCATTAACACTGTTAAGGATGGTGATGAGGAGACACATGCACAGGTGAGTCAGATG TTCATGATCGCGCCACTAGATCTGCACTTCTCTATCTTATATGATGTATTGAAGAAGCAT GTTGCAGAGGATGCAGACTACAAAGTGATTATATTCTGCACTACTGCGATGGTTACCAAA CTTGTCGCTGAAATTCTTTCCCAACTGAGACTGAATATAAGAGAGATTCATTCCAGAAAG TCACAATCTGCCAGAACTAAGGTCTCAGATGAATTCAGGAAGTCAAGGGGTCTGATATTG GTTAGTTCTGATGTATCTGCCCGCGGCGTGGATTATCCTGATGTCACCCTTGTCATACAG GTTGGGGTGCCAGCTGATAGACAGCAATATATACATAGACTTGGTAGAACTGGACGGAAG GGAAAGGAAGGGCAAGGCCTATTACTGTTGGCTCCATGGGAGAAGTACTTTCTTAGTAGC ATTAAGGATTTGTCAATATCAGAGGCTACGGTACCTTCTGTTGATTCAAGCACTCAGACA ATAGTCAAAGACGCAGTCCGGAAAGTTGAGATGAGGAGCAAGGAGTGTGCCTATCAAGCA TGGTTAGGATACTACAACTCTAACAAGACCATTGGCCGAGAAAAATCCAGACTTGTTAAG CTCGCAGAAGAGTTCAGCCAAAGCATGGAGCTTTCAGTTCCGCCAGCTATACCCAAGCAA ATTCTTCGAAAGATGGGACTTAACAATGTTCCTGGGCTGAGATCTACATAACCCTGATGC CTGAAATTAAGGTCCTTGTGCACTTTGTGCTAAAAGCGTAGAGCACACTATCGACATTTG ATCCATCACTGTGCTCTCTGCTGCGTTTATGGTAAACTTCAGGCGTGATGTACCTCACTG CTGCAGATATTTGAGCTTTGCAGCTCGGTGGGTTGATATTGGTCAGAAGTTTGGACGATC AACACTATGTATGATCACAGATCACTTCTCTCGGAGGTTCAGGAGTTCTAAGTTCAACTA TTCAAGCATGACTAGGAGTCTTTCTGGTCCTCTACAAATACAGGTTCAAAAACAGACAGT GATTCTACAGAAGCTCATATAGTGCAACACACGAAGATTTTTATTTTTACCTTGTTCTGA TCCATTTTGAGATGGATTTACTTGAGACACTAGATGATCAGATCGTTTATTAAACCCATG CTTATATATTATTTATCAGATAGTAGCATTTTTTTGCTACCA