Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os01t0618300-01
CDS Infomation	cds chromosome:IRGSP-1.0:1:24592460:24596220:-1 gene:Os01g0618300 gene_biotype:protein_coding transcript_biotype:protein_coding description:Armadillo-type fold domain containing protein. (Os01t0618300-01)
Sequence	ATGGCCGCAACAAGTGCAGCAAATGAGCGTAGCATAGCCATCCCGGGCCCGGGTGATGAT CAGCCTGCAGCACAGCCAGCCGCGCTGGCCGGCGGCGGCGACGAGGACGAGGGGGCGTGG AAGACGGCCCAGAAGTGGCTGAACCGCTTCGTCCGCGTCGTCGCTTTCGTGGAGAGGACG GGCAACGCCGTCGGCACGCTGGCCTTCACCTGGGCGACCGTCGTCGTGCTCGGTGGGTAC TCCACGGACCTGCGCGAGGATTTCTGGTACGCCATGGCGATAGTCTTCCTGGAGGCTTAC AGGGTGTTCAGCCGCCAAAACAAATCAGACGATAAATTCTTGTTCAAGACCACGGGAGGA ATCAGAGTGCTCAAGCTGTCTTCAACCCTGGAGCTGCTGTATTTTCTGAACGCGGTGATC GTGATGCTGTGCCTCTCCGTCATCCTCACGGTCGTCCTAACCCACGTATTCCCGAAAAAA CGGTACGTGCCGCTGGTGCTGGCTGCCCTGCTCGTGCTGCTAGCCAGGTTCCCCATCATC TGGCTCCTCAAACGAGCGAACAGACCAGGGTCAGGGCGCCGCGTCGTCGCGATAGTACTG CGGCTGACCCCCCTGGCCGCGATACTGGCCTTGGGCTGTTCACTGGTGCTGCTGTACGGC GCTCCGCCGGTGACGGTGCTGGCATCCGTGTTGCTGCTCTTCATGACGTTCGTTCTGTGC CAGCAGCTGATAGCCGTGCGGGAGAAGATCAAGAGACCGGCGCCCCTGCAGCGCCCGACG GCTGCAGGTGAGGCTTCGCCGCCGCCGCCGTCGTTTGCCCAGCGCGCGTGGCTGGTGCTC GCCAACACTATGTTGGTCGTCTGCCCACCCTTGATGGTTGCCTTCCTGACGGCGACGTTC GGCTTCCTGGGGCTGTACGTGGTGCTCACGGCGGTGGCGCTCGGCAACTTCCAGATCCCG GCGGCCGTCGCCCGCGTCGCCATCTCGTCGGCGCGCCTCGCCGGCAGGGTGGACCGCGTG AGCACGGGCAACGTCAACCTCGTGCCGTCGCTCAAGATCTTCTACGGGCTTGTGCTCGCC CAGGGCGCGCTCTACATCGTGGCGTGCCTGACGGATCCCTTCTCCGTCCTCCTCCGGAGA TGGCTGGCGCGGCGCTGCAAGCTCGGGACAAGGTCCGTCGACCTGTACTACGAGCACGCC TACGACGCGTGGATGGAGGACGGCTTGCTCGCCATGGAGGACGCGAACATCGTCAGCTTC GCCGTCGACTCCCTTTCGGCTCCGGCGGAACCCAGCCGCAGCCGCGAGAGGGTCCTTGCT GGGGTCACCGTCCTTCACTGCTTCCTCCGGCAACGAAGAGGCTCCAAGGCCCGGCTTGCT TCATCGAAGATCATCACCTCCACAAACGCAATTGCCACCTTGATCGGCATGCTGGGATGG GGCGCCGAAGAAGACCGGCAAATCAGGCTGTTCGCGGCGAAGGTCATCGGCGAGGTCGCC GGTGAGCTCCGGATCGCCAGGTTCCCTGGCACCGTGCAGCTGATATCTTCACTCCTTGAT GCTCCATCTTGCTCGAAGAAAGAACAAGACAGTGGAGGCTCAACACAGACAAAAGCAGCT GCAGGCAACGTTAATACTGACTCGACCTGCTGCTGTTGCTTCCCCAAGCCCAGTTGCCCG CGACGAATCAAGAATCTATGGTCAGCTCCAGACGAGGAGCCTCTCGACGACGACGAAGAC GCGCTCCCGATAATGGGGATGCTGATCCTCGAGAAGCTTGCTTCCGATCCCGAAAACTGC GCAGAAATCTGGAGGGCAACTAACCTCGTCTCGAAGGTGATAGGGTTCATAGCCTGCTCC AGCAACGAGGCACAGCGGAATCGACGACCCATCACCGCCTCGTCACTGAAGCTAGTCGCA AAGCTCGCCGGCGCCAAGGGGGAGATCGGCGTCACGCTCCGGCGGAAGATATCGGACCAT CCTTTCCTAGTGAGCAGCCTCGCCGGGATCTTGGAGGACGACGGCGCCGGCACGGAGGAA TGGTCGCCGGCGATGGATATCCTCGCCAAGCTCTGTGTCAACGCCGATACGAGGCAGGAG GTCGGGGAAATCGCGGCGATCATTACCAGATTGGTGCAAGAATTCTTCCCCTCGCAGCGA GACCAACAAGCGAGCAGTACACAAGATGATCGCCAGCTGCGGTTGGCGGCAGGTGAAGCA TTGGCGACGCTGGCAACGGAGAGCCCCGGCAACTGCTCGGCCATCCTCAAGGAATTCAAG GGAAAATATTGCGATCTTGTAAACGATCTCAAAAACATGATTTCGGCTAGGGACGAGGAT GGCTGCCGATGTGCGGCAAGCCTGCTGCAGAATCTGTGCGCGCACTCCGGAGACGAGCTG CGCCATCTTGGTTTCAGCGACCATCTTGCATCCGCCTTGAAAGTGATTTTGGAGAAAATA CTGAATACCAAGGGAAAGCAGCTAGAGGTCCTGATTGGGCTCACAGCGCAGATTCACAAC GCCATGCCTGCCTGCTTTAAAGATGCACTGGAATCCTTAGCCAATAATACAGCGGAGGCA CTCGTTCAGAAGATGGTGGATACACTCAACTCCAGCAAGAAGCCGAGCCCTGAATGCCCC AGGATGAGAAGAGCAATAGTCGAGCTAGCGATTTCCATAGTAGAAACGCGCACTCTTCCG TATGGCTATGCAGCCGACTTCAGGAAGAAGGGGATGGTGGAGGCGCTTTCCAAGGTAAAG AGGACGCCGTCAAAGGTGGAGAGATACAGGCTCTTCTTCGGCGATGCAGGGGTGGTTTTG TAG

Peptide Sequence

PEP ID	Os01t0618300-01
PEP Infomation	pep chromosome:IRGSP-1.0:1:24592460:24596220:-1 gene:Os01g0618300 transcript:Os01t0618300-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Armadillo-type fold domain containing protein. (Os01t0618300-01)
Sequence	MAATSAANERSIAIPGPGDDQPAAQPAALAGGGDEDEGAWKTAQKWLNRFVRVVAFVERT GNAVGTLAFTWATVVVLGGYSTDLREDFWYAMAIVFLEAYRVFSRQNKSDDKFLFKTTGG IRVLKLSSTLELLYFLNAVIVMLCLSVILTVVLTHVFPKKRYVPLVLAALLVLLARFPII WLLKRANRPGSGRRVVAIVLRLTPLAAILALGCSLVLLYGAPPVTVLASVLLLFMTFVLC QQLIAVREKIKRPAPLQRPTAAGEASPPPPSFAQRAWLVLANTMLVVCPPLMVAFLTATF GFLGLYVVLTAVALGNFQIPAAVARVAISSARLAGRVDRVSTGNVNLVPSLKIFYGLVLA QGALYIVACLTDPFSVLLRRWLARRCKLGTRSVDLYYEHAYDAWMEDGLLAMEDANIVSF AVDSLSAPAEPSRSRERVLAGVTVLHCFLRQRRGSKARLASSKIITSTNAIATLIGMLGW GAEEDRQIRLFAAKVIGEVAGELRIARFPGTVQLISSLLDAPSCSKKEQDSGGSTQTKAA AGNVNTDSTCCCCFPKPSCPRRIKNLWSAPDEEPLDDDEDALPIMGMLILEKLASDPENC AEIWRATNLVSKVIGFIACSSNEAQRNRRPITASSLKLVAKLAGAKGEIGVTLRRKISDH PFLVSSLAGILEDDGAGTEEWSPAMDILAKLCVNADTRQEVGEIAAIITRLVQEFFPSQR DQQASSTQDDRQLRLAAGEALATLATESPGNCSAILKEFKGKYCDLVNDLKNMISARDED GCRCAASLLQNLCAHSGDELRHLGFSDHLASALKVILEKILNTKGKQLEVLIGLTAQIHN AMPACFKDALESLANNTAEALVQKMVDTLNSSKKPSPECPRMRRAIVELAISIVETRTLP YGYAADFRKKGMVEALSKVKRTPSKVERYRLFFGDAGVVL

Transcript Sequence

Transcript ID	Os01t0618300-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:1:24592460:24596220:-1 gene:Os01g0618300 gene_biotype:protein_coding transcript_biotype:protein_coding description:Armadillo-type fold domain containing protein. (Os01t0618300-01)
Sequence	AGGATGGCCGCAACAAGTGCAGCAAATGAGCGTAGCATAGCCATCCCGGGCCCGGGTGAT GATCAGCCTGCAGCACAGCCAGCCGCGCTGGCCGGCGGCGGCGACGAGGACGAGGGGGCG TGGAAGACGGCCCAGAAGTGGCTGAACCGCTTCGTCCGCGTCGTCGCTTTCGTGGAGAGG ACGGGCAACGCCGTCGGCACGCTGGCCTTCACCTGGGCGACCGTCGTCGTGCTCGGTGGG TACTCCACGGACCTGCGCGAGGATTTCTGGTACGCCATGGCGATAGTCTTCCTGGAGGCT TACAGGGTGTTCAGCCGCCAAAACAAATCAGACGATAAATTCTTGTTCAAGACCACGGGA GGAATCAGAGTGCTCAAGCTGTCTTCAACCCTGGAGCTGCTGTATTTTCTGAACGCGGTG ATCGTGATGCTGTGCCTCTCCGTCATCCTCACGGTCGTCCTAACCCACGTATTCCCGAAA AAACGGTACGTGCCGCTGGTGCTGGCTGCCCTGCTCGTGCTGCTAGCCAGGTTCCCCATC ATCTGGCTCCTCAAACGAGCGAACAGACCAGGGTCAGGGCGCCGCGTCGTCGCGATAGTA CTGCGGCTGACCCCCCTGGCCGCGATACTGGCCTTGGGCTGTTCACTGGTGCTGCTGTAC GGCGCTCCGCCGGTGACGGTGCTGGCATCCGTGTTGCTGCTCTTCATGACGTTCGTTCTG TGCCAGCAGCTGATAGCCGTGCGGGAGAAGATCAAGAGACCGGCGCCCCTGCAGCGCCCG ACGGCTGCAGGTGAGGCTTCGCCGCCGCCGCCGTCGTTTGCCCAGCGCGCGTGGCTGGTG CTCGCCAACACTATGTTGGTCGTCTGCCCACCCTTGATGGTTGCCTTCCTGACGGCGACG TTCGGCTTCCTGGGGCTGTACGTGGTGCTCACGGCGGTGGCGCTCGGCAACTTCCAGATC CCGGCGGCCGTCGCCCGCGTCGCCATCTCGTCGGCGCGCCTCGCCGGCAGGGTGGACCGC GTGAGCACGGGCAACGTCAACCTCGTGCCGTCGCTCAAGATCTTCTACGGGCTTGTGCTC GCCCAGGGCGCGCTCTACATCGTGGCGTGCCTGACGGATCCCTTCTCCGTCCTCCTCCGG AGATGGCTGGCGCGGCGCTGCAAGCTCGGGACAAGGTCCGTCGACCTGTACTACGAGCAC GCCTACGACGCGTGGATGGAGGACGGCTTGCTCGCCATGGAGGACGCGAACATCGTCAGC TTCGCCGTCGACTCCCTTTCGGCTCCGGCGGAACCCAGCCGCAGCCGCGAGAGGGTCCTT GCTGGGGTCACCGTCCTTCACTGCTTCCTCCGGCAACGAAGAGGCTCCAAGGCCCGGCTT GCTTCATCGAAGATCATCACCTCCACAAACGCAATTGCCACCTTGATCGGCATGCTGGGA TGGGGCGCCGAAGAAGACCGGCAAATCAGGCTGTTCGCGGCGAAGGTCATCGGCGAGGTC GCCGGTGAGCTCCGGATCGCCAGGTTCCCTGGCACCGTGCAGCTGATATCTTCACTCCTT GATGCTCCATCTTGCTCGAAGAAAGAACAAGACAGTGGAGGCTCAACACAGACAAAAGCA GCTGCAGGCAACGTTAATACTGACTCGACCTGCTGCTGTTGCTTCCCCAAGCCCAGTTGC CCGCGACGAATCAAGAATCTATGGTCAGCTCCAGACGAGGAGCCTCTCGACGACGACGAA GACGCGCTCCCGATAATGGGGATGCTGATCCTCGAGAAGCTTGCTTCCGATCCCGAAAAC TGCGCAGAAATCTGGAGGGCAACTAACCTCGTCTCGAAGGTGATAGGGTTCATAGCCTGC TCCAGCAACGAGGCACAGCGGAATCGACGACCCATCACCGCCTCGTCACTGAAGCTAGTC GCAAAGCTCGCCGGCGCCAAGGGGGAGATCGGCGTCACGCTCCGGCGGAAGATATCGGAC CATCCTTTCCTAGTGAGCAGCCTCGCCGGGATCTTGGAGGACGACGGCGCCGGCACGGAG GAATGGTCGCCGGCGATGGATATCCTCGCCAAGCTCTGTGTCAACGCCGATACGAGGCAG GAGGTCGGGGAAATCGCGGCGATCATTACCAGATTGGTGCAAGAATTCTTCCCCTCGCAG CGAGACCAACAAGCGAGCAGTACACAAGATGATCGCCAGCTGCGGTTGGCGGCAGGTGAA GCATTGGCGACGCTGGCAACGGAGAGCCCCGGCAACTGCTCGGCCATCCTCAAGGAATTC AAGGGAAAATATTGCGATCTTGTAAACGATCTCAAAAACATGATTTCGGCTAGGGACGAG GATGGCTGCCGATGTGCGGCAAGCCTGCTGCAGAATCTGTGCGCGCACTCCGGAGACGAG CTGCGCCATCTTGGTTTCAGCGACCATCTTGCATCCGCCTTGAAAGTGATTTTGGAGAAA ATACTGAATACCAAGGGAAAGCAGCTAGAGGTCCTGATTGGGCTCACAGCGCAGATTCAC AACGCCATGCCTGCCTGCTTTAAAGATGCACTGGAATCCTTAGCCAATAATACAGCGGAG GCACTCGTTCAGAAGATGGTGGATACACTCAACTCCAGCAAGAAGCCGAGCCCTGAATGC CCCAGGATGAGAAGAGCAATAGTCGAGCTAGCGATTTCCATAGTAGAAACGCGCACTCTT CCGTATGGCTATGCAGCCGACTTCAGGAAGAAGGGGATGGTGGAGGCGCTTTCCAAGGTA AAGAGGACGCCGTCAAAGGTGGAGAGATACAGGCTCTTCTTCGGCGATGCAGGGGTGGTT TTGTAGCGTGGATTGCCTCTGCCTGATATAGTGGCCACGACAAAAGGGCTAATCGAAACT GCATCTCCATCTCCAGGAGTTTAACGTAACCCCCATGCTCTTTTGTGGTTGTACAGAACT TCGGTGCGGCACTTTTGTTCTGTTCTTTTTCTCTGTCTTTGTTCAGGAGTGTGCATGTTC GCTAAGTGCTTTAAGCCCATAAGGATATTTGTTTATTGGATGTGATCCGAATATAATTAT GGAAAATCTTAGAC