Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os01t0618000-01
CDS Infomation

cds chromosome:IRGSP-1.0:1:24575726:24576859:-1 gene:Os01g0618000 gene_biotype:protein_coding transcript_biotype:protein_coding description:Exonuclease domain containing protein. (Os01t0618000-01)
Sequence

ATGTTCGCGCCGACGTTCGCGGTGGCCGCCGCTCTGGCGCCGCCGCCGCCTCGAGGAGGC
GGAGGCGGAGGAGGGGAGTTCGACCACTTCGTGGTGGTGGACTTCGAGGCGACGTGCGAG
AGGGGCAGGCGGATCTACCCGCAGGAGATCATCGAGTTCCCCGCGGTGCTCGTGGACGCC
GCCACGGGCCGCCTCGTGTCCGCGTTCCGCGCCTACGTCCGCCCGCGCCACCACCCGCGG
CTCACCGACTTCTGCCGCGAGCTCACGGGGATCGCCCAGGGCGACGTCGACGCCGGGGTG
GGCCTCGCCGAGGCGCTCCTCAGGCACGACGAGTGGCTGCGTGCGGCCGGGGTCGTCGAG
GGCGGCGGGCGGTTCGCCGTCGTCACGTGGGGCGACGCCGACTGCCGCACCATGCTGGAG
CAGGAGTGCCGGTTCAAGGGCATCGCGAAGCCGGCCTACTTCGACCGGTGGGTCGACCTC
AGGGTCCACTTCGAGGCGGCGTTCGGCGGCGGCGGGCAGCGGGTGAAGCTGCAGGAGGCG
GTCAGGGCGGCGGGGCTGGAGTGGGTGGGGCGCCTGCACTGCGGCCTCGACGACGCCTGC
AACACGGCGCGCCTCCTCGTCGAGCTCTTGCGCCGCGGCGTCCCCATCTCCATCACCGGC
TCGCTGCCGGCCGCGCCGCCGCCGCTTGAGCAAGCTCGTAAGCAGCAGCAGCAGCAGGAG
ATGCAGCAGCTGCTCGTCCCGTGCGGCGCGGCGGTGTGCTGCTACTGCGGCGTGGCGAGC
ACGGGAGGGGTGATGGCGATGCCGGGGTCGACGCAGCGGCGGTGCTTCTACGGCTGCGGC
AACTGGACGGCGGTGTCCGGGGCGACGTGCCCCTTCTTTCTCATGGGCGGCGTAGTGGAT
TGTCCTATAAATTAG

Peptide Sequence

PEP ID

Os01t0618000-01
PEP Infomation

pep chromosome:IRGSP-1.0:1:24575726:24576859:-1 gene:Os01g0618000 transcript:Os01t0618000-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Exonuclease domain containing protein. (Os01t0618000-01)
Sequence

MFAPTFAVAAALAPPPPRGGGGGGGEFDHFVVVDFEATCERGRRIYPQEIIEFPAVLVDA
ATGRLVSAFRAYVRPRHHPRLTDFCRELTGIAQGDVDAGVGLAEALLRHDEWLRAAGVVE
GGGRFAVVTWGDADCRTMLEQECRFKGIAKPAYFDRWVDLRVHFEAAFGGGGQRVKLQEA
VRAAGLEWVGRLHCGLDDACNTARLLVELLRRGVPISITGSLPAAPPPLEQARKQQQQQE
MQQLLVPCGAAVCCYCGVASTGGVMAMPGSTQRRCFYGCGNWTAVSGATCPFFLMGGVVD
CPIN

Transcript Sequence

Transcript ID

Os01t0618000-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:1:24575726:24576859:-1 gene:Os01g0618000 gene_biotype:protein_coding transcript_biotype:protein_coding description:Exonuclease domain containing protein. (Os01t0618000-01)
Sequence

AACTAACCACGCCACGTATGCCGGGTCGCACCCAACCCAAACCCAAAGGTCGCTAGGAAC
TCGCTACTACTCCCACCCACCCACCGATCATGTTCGCGCCGACGTTCGCGGTGGCCGCCG
CTCTGGCGCCGCCGCCGCCTCGAGGAGGCGGAGGCGGAGGAGGGGAGTTCGACCACTTCG
TGGTGGTGGACTTCGAGGCGACGTGCGAGAGGGGCAGGCGGATCTACCCGCAGGAGATCA
TCGAGTTCCCCGCGGTGCTCGTGGACGCCGCCACGGGCCGCCTCGTGTCCGCGTTCCGCG
CCTACGTCCGCCCGCGCCACCACCCGCGGCTCACCGACTTCTGCCGCGAGCTCACGGGGA
TCGCCCAGGGCGACGTCGACGCCGGGGTGGGCCTCGCCGAGGCGCTCCTCAGGCACGACG
AGTGGCTGCGTGCGGCCGGGGTCGTCGAGGGCGGCGGGCGGTTCGCCGTCGTCACGTGGG
GCGACGCCGACTGCCGCACCATGCTGGAGCAGGAGTGCCGGTTCAAGGGCATCGCGAAGC
CGGCCTACTTCGACCGGTGGGTCGACCTCAGGGTCCACTTCGAGGCGGCGTTCGGCGGCG
GCGGGCAGCGGGTGAAGCTGCAGGAGGCGGTCAGGGCGGCGGGGCTGGAGTGGGTGGGGC
GCCTGCACTGCGGCCTCGACGACGCCTGCAACACGGCGCGCCTCCTCGTCGAGCTCTTGC
GCCGCGGCGTCCCCATCTCCATCACCGGCTCGCTGCCGGCCGCGCCGCCGCCGCTTGAGC
AAGCTCGTAAGCAGCAGCAGCAGCAGGAGATGCAGCAGCTGCTCGTCCCGTGCGGCGCGG
CGGTGTGCTGCTACTGCGGCGTGGCGAGCACGGGAGGGGTGATGGCGATGCCGGGGTCGA
CGCAGCGGCGGTGCTTCTACGGCTGCGGCAACTGGACGGCGGTGTCCGGGGCGACGTGCC
CCTTCTTTCTCATGGGCGGCGTAGTGGATTGTCCTATAAATTAGCAACTCTGTGCTGGGA
ATTCTTACACACAAAAAAAAATATTATGTAATCAAATTACAACAGATAGCCTTTTTTCAT
GTTCAGTTTCAGTTTCTGATCTAAATGAAATTATAGGAGTACCATTTTTTGCTG