Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os01t0617800-01
CDS Infomation

cds chromosome:IRGSP-1.0:1:24569001:24571535:-1 gene:Os01g0617800 gene_biotype:protein_coding transcript_biotype:protein_coding description:Conserved hypothetical protein. (Os01t0617800-01)
Sequence

ATGGGGGAACCGAGCAAGGAGCTCCTGGACCTCCCCTCCGAGCCCAAGCCGCCATCCCTC
ATCGAGTCGATTCTCGTGGGGAGGAGAGAACAGCAGCAGCACAAGGAGGGGAAGCGCAAG
GCGGGGCCTCCCACCGATCCACTCCCCAAGAGCCAAGTTCTAGGAAGAGTGAAAGATTTC
TTGGGAGAGATGGCAAAGGCGAACGAGAAATTGCATCTCGATGTAAAAAATAAGCGTCCT
GAAGAGTATGATATCGAAGCGCTTACAGGGAACGAGAAGGAATATATTGAGATGGATTTG
CTTCTTGGTGTAGCTGATTTGCATTCAGAGAAAGCTGTAGAAGTAGCTGAAGCAACAATG
AACGGCTTCCCACCTTCAGGAAGGTCATTCGCTTGCAGCTCATCTGACTCTGAAGATGAT
AGTGATGGTAGTGACGAAGACAGCGGTGATGAAACAAACATGTCTAGCAAAGATGCGGAT
GAACCGGAGGCTCAAGCATCAAAAGGAAAGAAGCCCAATAAACGGCAGAAGATCGTTGTT
CTTAACTAG

Peptide Sequence

PEP ID

Os01t0617800-01
PEP Infomation

pep chromosome:IRGSP-1.0:1:24569001:24571535:-1 gene:Os01g0617800 transcript:Os01t0617800-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Conserved hypothetical protein. (Os01t0617800-01)
Sequence

MGEPSKELLDLPSEPKPPSLIESILVGRREQQQHKEGKRKAGPPTDPLPKSQVLGRVKDF
LGEMAKANEKLHLDVKNKRPEEYDIEALTGNEKEYIEMDLLLGVADLHSEKAVEVAEATM
NGFPPSGRSFACSSSDSEDDSDGSDEDSGDETNMSSKDADEPEAQASKGKKPNKRQKIVV
LN

Transcript Sequence

Transcript ID

Os01t0617800-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:1:24569001:24571535:-1 gene:Os01g0617800 gene_biotype:protein_coding transcript_biotype:protein_coding description:Conserved hypothetical protein. (Os01t0617800-01)
Sequence

GCCCGCCGCCTCCACCGTCTCCGCTCGCCGCGCGCTCCCGCCGCCGCGCAGCTCATCTTC
CCCTAGGCTTCTTCCCTTCCGGCGGGGCCATCCAGATTACTGGGTCCTCTCTGTCCAGAA
GGCCTCGCCTCGCCTCGCCGGTGACAGCCATGGGGGAACCGAGCAAGGAGCTCCTGGACC
TCCCCTCCGAGCCCAAGCCGCCATCCCTCATCGAGTCGATTCTCGTGGGGAGGAGAGAAC
AGCAGCAGCACAAGGAGGGGAAGCGCAAGGCGGGGCCTCCCACCGATCCACTCCCCAAGA
GCCAAGTTCTAGGAAGAGTGAAAGATTTCTTGGGAGAGATGGCAAAGGCGAACGAGAAAT
TGCATCTCGATGTAAAAAATAAGCGTCCTGAAGAGTATGATATCGAAGCGCTTACAGGGA
ACGAGAAGGAATATATTGAGATGGATTTGCTTCTTGGTGTAGCTGATTTGCATTCAGAGA
AAGCTGTAGAAGTAGCTGAAGCAACAATGAACGGCTTCCCACCTTCAGGAAGGTCATTCG
CTTGCAGCTCATCTGACTCTGAAGATGATAGTGATGGTAGTGACGAAGACAGCGGTGATG
AAACAAACATGTCTAGCAAAGATGCGGATGAACCGGAGGCTCAAGCATCAAAAGGAAAGA
AGCCCAATAAACGGCAGAAGATCGTTGTTCTTAACTAGGATCCTTGTCATCTTTGACAAA
CCAAGGGGAGGGAGTTGTGCTAGTATTTCAGAAAGGTTGTGCTACAGAATGGGACTGAGA
CTACCAGGGCAGCTTGAAGAACAGACATCAAGATATCAGAATTACCTACTGTATTTTGTT
GTAGAATGCTGAGGTTAGCTAGGATTATTTGTTTTCGTCAGGGCCAAATGATGGCATGTC
AAGGCCCTACTTGGGGAATACACTGCGCAGCAGTATTGCCAGTTCTGATCTATACGACTA
TACGTGTCCCTTTAGTTCCTTGGAGCCGAGTTATTGATTTTGTTTCATATACATTGAAAT
CAATGTTCACGAATACTCATGTATTCGTTTAATTGTCTG