Gene sequences

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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os01t0616600-01
CDS Infomation	cds chromosome:IRGSP-1.0:1:24484515:24485903:1 gene:Os01g0616600 gene_biotype:protein_coding transcript_biotype:protein_coding description:Pentatricopeptide repeat domain containing protein. (Os01t0616600-01)
Sequence	ATGGCCACCGCCGCCGTCTTCTCCGCCTCGGCCCGCCGCCTCCTCTCCACCGTCGCCGGC GGCGCCGGGGCCGGATCCGCCGCCGAGCTCCCCGTCTTGATTGGCCACCTCCGCAGCCTC GCCCGCGCGGGCCGCCTCGCCGACATCGACGCCGCCCTCGCGCCGCACCTGGCGTCCCAC TCCGTCGCGGCGGTCTCCGCCCTCTCCTCGGTGGGCCTCCCCGACCGCGCCTCCGCGCTC CTCGCCACCATCCGGAACCCAACCGCCGCGCACCTCAACGCGCTCCTGGCCCCGCTCCTC CGCCGCCACCGCCTCGTGGGCCTCATCCCCACCCTCCTCGCGGCGCACCCCTCCGTCCCG CGCGACGACGCCACGGAGGGCATCCACGCCAAGGCCCTCTGCATCGCCACCGGCGCCGAC TCCGCGCTCCACCTCCTCCAGCGGGAGTCGCCGCCGCCGTCCCTCCAGCTCTTCACCAGC GTCATCGACTCCTACTATAAGCAGCGCAAGCCCCACCGCGCCGAGCAGCTGTGGCGCGAG ATGGTCGAGGACCACGGCATCGTCCCCGACGCCGCCGCCCACAACGTCAGGATCACCTAC AAGGCCGCCACCGGCACGGTGGAGGAGGTCAAGGAGCTGATCCGCGCCATGCGCGAGGAT GCCGGCCTCCAGCCGGACATCGTCTCCCACAACGGGCTGATGCGCGCGATGGCGCGGCAC GGGAGGGTGGACGAGATGATGGAGGTGTACAAGAGGCTGGAGAAGGGTAGCGCCTCCGCC GCGGCGGAGGGCAAGTCGGCGCCGGACTGCGCGACGTACACCTGCGTGGTGGCCGCGCTG TGCAAGGCGGGGCGGTGGTCGGAGGCGGACGACGTGTTCTACGAGGCGGTGAAGCGGAGG AAGCTGGCCGACCTCGGGACGGCGCGCGTTCTGGTGCGAGGCCTCAAGGAGGCCGGCAAG GGGCGGGCGGCGAGGCGGGTGGTGATCGGGCTGCGCAAGAAGTTCCCCGACCGCTTCGAC GGCCCGTGGAAGGATCTCGAGGAGTTGGCCGGGATCGCCGGCGAGGATGAGGAGAGCGAT GTCGAAGGGGAGGACGACGAGCAGCCGCCGGCGACGACGACGACCACTGCCGCGTGA

Peptide Sequence

PEP ID	Os01t0616600-01
PEP Infomation	pep chromosome:IRGSP-1.0:1:24484515:24485903:1 gene:Os01g0616600 transcript:Os01t0616600-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Pentatricopeptide repeat domain containing protein. (Os01t0616600-01)
Sequence	MATAAVFSASARRLLSTVAGGAGAGSAAELPVLIGHLRSLARAGRLADIDAALAPHLASH SVAAVSALSSVGLPDRASALLATIRNPTAAHLNALLAPLLRRHRLVGLIPTLLAAHPSVP RDDATEGIHAKALCIATGADSALHLLQRESPPPSLQLFTSVIDSYYKQRKPHRAEQLWRE MVEDHGIVPDAAAHNVRITYKAATGTVEEVKELIRAMREDAGLQPDIVSHNGLMRAMARH GRVDEMMEVYKRLEKGSASAAAEGKSAPDCATYTCVVAALCKAGRWSEADDVFYEAVKRR KLADLGTARVLVRGLKEAGKGRAARRVVIGLRKKFPDRFDGPWKDLEELAGIAGEDEESD VEGEDDEQPPATTTTTAA

Transcript Sequence

Transcript ID	Os01t0616600-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:1:24484515:24485903:1 gene:Os01g0616600 gene_biotype:protein_coding transcript_biotype:protein_coding description:Pentatricopeptide repeat domain containing protein. (Os01t0616600-01)
Sequence	AGTACCAAACCAGAGGTCGATCCGGTTCCCAGCCATGGCCACCGCCGCCGTCTTCTCCGC CTCGGCCCGCCGCCTCCTCTCCACCGTCGCCGGCGGCGCCGGGGCCGGATCCGCCGCCGA GCTCCCCGTCTTGATTGGCCACCTCCGCAGCCTCGCCCGCGCGGGCCGCCTCGCCGACAT CGACGCCGCCCTCGCGCCGCACCTGGCGTCCCACTCCGTCGCGGCGGTCTCCGCCCTCTC CTCGGTGGGCCTCCCCGACCGCGCCTCCGCGCTCCTCGCCACCATCCGGAACCCAACCGC CGCGCACCTCAACGCGCTCCTGGCCCCGCTCCTCCGCCGCCACCGCCTCGTGGGCCTCAT CCCCACCCTCCTCGCGGCGCACCCCTCCGTCCCGCGCGACGACGCCACGGAGGGCATCCA CGCCAAGGCCCTCTGCATCGCCACCGGCGCCGACTCCGCGCTCCACCTCCTCCAGCGGGA GTCGCCGCCGCCGTCCCTCCAGCTCTTCACCAGCGTCATCGACTCCTACTATAAGCAGCG CAAGCCCCACCGCGCCGAGCAGCTGTGGCGCGAGATGGTCGAGGACCACGGCATCGTCCC CGACGCCGCCGCCCACAACGTCAGGATCACCTACAAGGCCGCCACCGGCACGGTGGAGGA GGTCAAGGAGCTGATCCGCGCCATGCGCGAGGATGCCGGCCTCCAGCCGGACATCGTCTC CCACAACGGGCTGATGCGCGCGATGGCGCGGCACGGGAGGGTGGACGAGATGATGGAGGT GTACAAGAGGCTGGAGAAGGGTAGCGCCTCCGCCGCGGCGGAGGGCAAGTCGGCGCCGGA CTGCGCGACGTACACCTGCGTGGTGGCCGCGCTGTGCAAGGCGGGGCGGTGGTCGGAGGC GGACGACGTGTTCTACGAGGCGGTGAAGCGGAGGAAGCTGGCCGACCTCGGGACGGCGCG CGTTCTGGTGCGAGGCCTCAAGGAGGCCGGCAAGGGGCGGGCGGCGAGGCGGGTGGTGAT CGGGCTGCGCAAGAAGTTCCCCGACCGCTTCGACGGCCCGTGGAAGGATCTCGAGGAGTT GGCCGGGATCGCCGGCGAGGATGAGGAGAGCGATGTCGAAGGGGAGGACGACGAGCAGCC GCCGGCGACGACGACGACCACTGCCGCGTGAGCTCTCGCAGTAATTTGGTCGTGTTCGTG GTTTTAGCAAATTTGCATTCGTGGTAATACGAAGACCATATAATGGTTTAGGATTTTAGG GCTGGATCAATAAGAAGCAAATTCTGAGGATGCGAGAATCACTCAAATTTTGTCAAACTA GCTTCTTGAATCACACCATAAAACTTCTTTAATGTGATGTCTCGTTGTAATGATTGATCT TGTTTCTAC