Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os01t0612700-01
CDS Infomation	cds chromosome:IRGSP-1.0:1:24294290:24299500:1 gene:Os01g0612700 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:LSD1-LIKE ZINC FINGER PROTEIN description:Zinc finger, LSD1-type domain containing protein. (Os01t0612700-01);LSD1-like-type zinc finger protein, Disease resistance, Saline-alkaline stress resistance (Os01t0612700-02)
Sequence	GCAGCCAGTGTGTCTCCAGTATTGGACAGTGGGGATCCAGATGCAGCTGAGGTTGATGTA GTAGTAGGGATGCAAGAACAAGCTGCTGGTTCAGCGCTTGCCATGTTGGTAACTTACGGG GAGACTGATACCTCAGCAGTCAGTGTATCTCCAGTACTGGAGAGTGGGGAGCCAGATGCA GCCCAGATTGATGTAGTAGCAGGGATGCAAGAAGAAGCTCCTGGTTCAATGTTGGCCATG GAGGTAACGTACAGGGAGGTTGATGCTGCAACAGTCAGTGTGTCTCCGGTATTGGAGAGT GTGGAGCCAGATGCAGCCAAGATCGATGTAGTAGCAAGGATGCAAGAAGAAGCTCCTGGT TCAAAGCTTGCCATGGAGGTAATGTACGGGGAGACTGGTACCGCAGCAGTCAGTGTGCCT CTGGTATTGGAGAGTAGGGAAGAGGGGTCACTTCAAGAATCAATGCAGAGACCATCTTCT CCCACAATGAACATTGAGCAAGAGTCAATGCAGAGACCATTTTCTCCCACAATTGGCACT GAGACAAGTTCGCCAGAGATGGCTCCTGCTGGATCTGAGAACTGTAAAGTATCATGGTTG CCGTTGCCCCCTCCTACACCACTTGGCGAATCAATGCCCTCCTTGCCAGTCGCAGCTGCC CCCAAGGTTTTATTGGTGATGCCGGAGGAAGCGGTTGAGTCAGTCCCTTCATCGGAAGCT CTGGATGTTGAAAAACCTGCCTCCATCACACAGGCTGAGCCCAGCTCACCTAATACGCCA CCGCCAGGATTTGAGAATTTTAAGTCGTCATGGTTGCCGCTACCCACGACTCCTCCCCCA GTTGAAACCACTGATGTCTTGCCAGATGTGGTGGTTACCAAGGCAGTGGAAGCACCCATT GAGGAAGTGTCTAGGCCATTGCCAGCTTTGGAGGTGACAAACATGGAGTCAGACACTGTC CTCAGTATCTTGCCCACAACAGTCTTGCCAACAGAAGGGACTGAGGGACTACTGCAACAA CCACTATTGAGACCCCCTTCTCCAGTGGTGCAATCTGAACCATGTTTGCAAAATGAGATG GCACCTCCAGGGTTCGAGAATTTTAAGTCATCATCTGAACCATGTTCAGCAGAGGAGATA GCACCTCCAGGGTCCGATAATTTCAAATCATCATCTGAACCATGTTTACCAGAGGAGATG GCACCTCCAGGGTTTGAAAATTTTAAGTCATCATCTGAACCATGTTCACAAGAGGAGATG GCACCTCCAGGGTTTGAGAATTTTAAGTCATCATGGCCACCACTTCCCACTCTGCCCCAA ACTGTACCAGATGCAGCCGCAGCGGATGCTTTGGCAGCAACAGTGGAAGAAGCAGCTGGG CCACCACCTGCATTGGAGTTGGAGGCAATGGATGTGGACATGGATGCCATACATCCACCA CCGCTGCCTTTTGACAGTGGAGTGGAGTCATTGCAAAAGCCACTGCCAAGAGCACCTTCT CCCATAATGCAAGAAGCGCCCTGTTCACCAGATAGGGCACCGCCAGGGTTTGAAACCTAT AAGTCATCACAGTTACTGCTACCATCTCCATCTCTGGCACAAACCACAAATGTGCGACAA GATCAATCGGTAACTGAACCTGTGTCTGTGATAGAGGAAGCCCCTCAGCTACTGCACTCA GTGGAGGTAATGGGTGTACATATGGATGCAGTACCTCCATTGCTACCATCATCTGAAAGT GGAGCAGATGGGCTATCTCCGCAGCAATTCGCGCAACCTCCTCCTGCAGAAAAGGATACA ACAACCTGTTTGCCAGATATGGTGCATTCAGGATGTGACAATTCAGAGCCCTCTCAGCTT CTGTCACTGCCTGCTGTTATTTCTCCAGTTCAGACCCCAGATGGCTTGGCTGATGTTCCT GCCATTGACAGGGTTGCAGTGGCATTGGAAGAATCGCCTCAGCGACCGCTTGTATCAGGG GAAATGGAAGCTGGCACAGTGCCCATTCGGTCATCACCACTGAAGAATATTTCTGAGGGG TCACTGCCACAACTAGAATCAGAGTCACATTCTCCTACATCACAGGCTGCAGATAGCTTA CTAGATGCATCTGACTCAAAGTCTGTGGCTGTGGCCTCAGAGGAGATGTCTCAGCTACCA CTTGCATCGCAGGCAACTACTACAGACCTTGTCAGTACAACTGCAATGCAGCCACAATCT GAGGGTATAGTGGATGAGTCATTGCAGCCTCAGCATCCACCCTCTTCTACCGCACATGAT TCACCTTGTTTACAGGACTCTGTGCCATTGGTGCCACCACCACCTTCCCCTTACCTAAAT AAAGAAGTAGGTCAAATGGTATGTGGAAGCTGCCGTATTCTTCTTGCTTATTTTAGAGGT GCTGGTTATGTTCACTGTACTTGTTGCCAGACAATGAACTATGTATTGGAAGCTCATGAA GTTGGTAAGGTGCATTGTGGACACTGTGCGACATTATTGATGTATCCTTTTGGTGCGCCT GCTGTTAAGTGCTCGTTGTGCCTCTTTGTCACTGAAATTGGAGAGCGGAATGTTCGCCGT CGGTTATCAATCGAGCAACCCACAAGAACTAACTCATCAGGGCTAGCTGAAGCCTGA

Peptide Sequence

PEP ID	Os01t0612700-01
PEP Infomation	pep chromosome:IRGSP-1.0:1:24294290:24299500:1 gene:Os01g0612700 transcript:Os01t0612700-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:LSD1-LIKE ZINC FINGER PROTEIN description:Zinc finger, LSD1-type domain containing protein. (Os01t0612700-01);LSD1-like-type zinc finger protein, Disease resistance, Saline-alkaline stress resistance (Os01t0612700-02)
Sequence	AASVSPVLDSGDPDAAEVDVVVGMQEQAAGSALAMLVTYGETDTSAVSVSPVLESGEPDA AQIDVVAGMQEEAPGSMLAMEVTYREVDAATVSVSPVLESVEPDAAKIDVVARMQEEAPG SKLAMEVMYGETGTAAVSVPLVLESREEGSLQESMQRPSSPTMNIEQESMQRPFSPTIGT ETSSPEMAPAGSENCKVSWLPLPPPTPLGESMPSLPVAAAPKVLLVMPEEAVESVPSSEA LDVEKPASITQAEPSSPNTPPPGFENFKSSWLPLPTTPPPVETTDVLPDVVVTKAVEAPI EEVSRPLPALEVTNMESDTVLSILPTTVLPTEGTEGLLQQPLLRPPSPVVQSEPCLQNEM APPGFENFKSSSEPCSAEEIAPPGSDNFKSSSEPCLPEEMAPPGFENFKSSSEPCSQEEM APPGFENFKSSWPPLPTLPQTVPDAAAADALAATVEEAAGPPPALELEAMDVDMDAIHPP PLPFDSGVESLQKPLPRAPSPIMQEAPCSPDRAPPGFETYKSSQLLLPSPSLAQTTNVRQ DQSVTEPVSVIEEAPQLLHSVEVMGVHMDAVPPLLPSSESGADGLSPQQFAQPPPAEKDT TTCLPDMVHSGCDNSEPSQLLSLPAVISPVQTPDGLADVPAIDRVAVALEESPQRPLVSG EMEAGTVPIRSSPLKNISEGSLPQLESESHSPTSQAADSLLDASDSKSVAVASEEMSQLP LASQATTTDLVSTTAMQPQSEGIVDESLQPQHPPSSTAHDSPCLQDSVPLVPPPPSPYLN KEVGQMVCGSCRILLAYFRGAGYVHCTCCQTMNYVLEAHEVGKVHCGHCATLLMYPFGAP AVKCSLCLFVTEIGERNVRRRLSIEQPTRTNSSGLAEA

Transcript Sequence

Transcript ID	Os01t0612700-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:1:24294290:24299500:1 gene:Os01g0612700 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:LSD1-LIKE ZINC FINGER PROTEIN description:Zinc finger, LSD1-type domain containing protein. (Os01t0612700-01);LSD1-like-type zinc finger protein, Disease resistance, Saline-alkaline stress resistance (Os01t0612700-02)
Sequence	CAGCAGCCAGTGTGTCTCCAGTATTGGACAGTGGGGATCCAGATGCAGCTGAGGTTGATG TAGTAGTAGGGATGCAAGAACAAGCTGCTGGTTCAGCGCTTGCCATGTTGGTAACTTACG GGGAGACTGATACCTCAGCAGTCAGTGTATCTCCAGTACTGGAGAGTGGGGAGCCAGATG CAGCCCAGATTGATGTAGTAGCAGGGATGCAAGAAGAAGCTCCTGGTTCAATGTTGGCCA TGGAGGTAACGTACAGGGAGGTTGATGCTGCAACAGTCAGTGTGTCTCCGGTATTGGAGA GTGTGGAGCCAGATGCAGCCAAGATCGATGTAGTAGCAAGGATGCAAGAAGAAGCTCCTG GTTCAAAGCTTGCCATGGAGGTAATGTACGGGGAGACTGGTACCGCAGCAGTCAGTGTGC CTCTGGTATTGGAGAGTAGGGAAGAGGGGTCACTTCAAGAATCAATGCAGAGACCATCTT CTCCCACAATGAACATTGAGCAAGAGTCAATGCAGAGACCATTTTCTCCCACAATTGGCA CTGAGACAAGTTCGCCAGAGATGGCTCCTGCTGGATCTGAGAACTGTAAAGTATCATGGT TGCCGTTGCCCCCTCCTACACCACTTGGCGAATCAATGCCCTCCTTGCCAGTCGCAGCTG CCCCCAAGGTTTTATTGGTGATGCCGGAGGAAGCGGTTGAGTCAGTCCCTTCATCGGAAG CTCTGGATGTTGAAAAACCTGCCTCCATCACACAGGCTGAGCCCAGCTCACCTAATACGC CACCGCCAGGATTTGAGAATTTTAAGTCGTCATGGTTGCCGCTACCCACGACTCCTCCCC CAGTTGAAACCACTGATGTCTTGCCAGATGTGGTGGTTACCAAGGCAGTGGAAGCACCCA TTGAGGAAGTGTCTAGGCCATTGCCAGCTTTGGAGGTGACAAACATGGAGTCAGACACTG TCCTCAGTATCTTGCCCACAACAGTCTTGCCAACAGAAGGGACTGAGGGACTACTGCAAC AACCACTATTGAGACCCCCTTCTCCAGTGGTGCAATCTGAACCATGTTTGCAAAATGAGA TGGCACCTCCAGGGTTCGAGAATTTTAAGTCATCATCTGAACCATGTTCAGCAGAGGAGA TAGCACCTCCAGGGTCCGATAATTTCAAATCATCATCTGAACCATGTTTACCAGAGGAGA TGGCACCTCCAGGGTTTGAAAATTTTAAGTCATCATCTGAACCATGTTCACAAGAGGAGA TGGCACCTCCAGGGTTTGAGAATTTTAAGTCATCATGGCCACCACTTCCCACTCTGCCCC AAACTGTACCAGATGCAGCCGCAGCGGATGCTTTGGCAGCAACAGTGGAAGAAGCAGCTG GGCCACCACCTGCATTGGAGTTGGAGGCAATGGATGTGGACATGGATGCCATACATCCAC CACCGCTGCCTTTTGACAGTGGAGTGGAGTCATTGCAAAAGCCACTGCCAAGAGCACCTT CTCCCATAATGCAAGAAGCGCCCTGTTCACCAGATAGGGCACCGCCAGGGTTTGAAACCT ATAAGTCATCACAGTTACTGCTACCATCTCCATCTCTGGCACAAACCACAAATGTGCGAC AAGATCAATCGGTAACTGAACCTGTGTCTGTGATAGAGGAAGCCCCTCAGCTACTGCACT CAGTGGAGGTAATGGGTGTACATATGGATGCAGTACCTCCATTGCTACCATCATCTGAAA GTGGAGCAGATGGGCTATCTCCGCAGCAATTCGCGCAACCTCCTCCTGCAGAAAAGGATA CAACAACCTGTTTGCCAGATATGGTGCATTCAGGATGTGACAATTCAGAGCCCTCTCAGC TTCTGTCACTGCCTGCTGTTATTTCTCCAGTTCAGACCCCAGATGGCTTGGCTGATGTTC CTGCCATTGACAGGGTTGCAGTGGCATTGGAAGAATCGCCTCAGCGACCGCTTGTATCAG GGGAAATGGAAGCTGGCACAGTGCCCATTCGGTCATCACCACTGAAGAATATTTCTGAGG GGTCACTGCCACAACTAGAATCAGAGTCACATTCTCCTACATCACAGGCTGCAGATAGCT TACTAGATGCATCTGACTCAAAGTCTGTGGCTGTGGCCTCAGAGGAGATGTCTCAGCTAC CACTTGCATCGCAGGCAACTACTACAGACCTTGTCAGTACAACTGCAATGCAGCCACAAT CTGAGGGTATAGTGGATGAGTCATTGCAGCCTCAGCATCCACCCTCTTCTACCGCACATG ATTCACCTTGTTTACAGGACTCTGTGCCATTGGTGCCACCACCACCTTCCCCTTACCTAA ATAAAGAAGTAGGTCAAATGGTATGTGGAAGCTGCCGTATTCTTCTTGCTTATTTTAGAG GTGCTGGTTATGTTCACTGTACTTGTTGCCAGACAATGAACTATGTATTGGAAGCTCATG AAGTTGGTAAGGTGCATTGTGGACACTGTGCGACATTATTGATGTATCCTTTTGGTGCGC CTGCTGTTAAGTGCTCGTTGTGCCTCTTTGTCACTGAAATTGGAGAGCGGAATGTTCGCC GTCGGTTATCAATCGAGCAACCCACAAGAACTAACTCATCAGGGCTAGCTGAAGCCTGAT CAGTTCTGGTCCCATGTACCCATCGGATTCCAAGAAAGCTTCAAATGCTAATGTGGATGA AAGGAACAGAATGTTCGCCCTTCGTCATGAGGTGTGGGCATGAAAGTTCAAGATGGTATG GACAAGCCAAAGTGTACAAAGATAGCGTTTTTTTTTTCATTGATGTAGACAGGAAAGGTG ACCTTGTTAGTACGACTAGATCTCCTTTGAAAGGGAAAATAAAAGAAAAATAGTTCGATT CAATCTGGAGGTGATATGCGTATGTCATATGAATGATAACAGAGTAGTTTTCAGATGGTT CTTTCGCGGTGACCATCATGTTGCCCCC