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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os01t0612200-01
CDS Infomation

cds chromosome:IRGSP-1.0:1:24255379:24259940:1 gene:Os01g0612200 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:cytochrome c oxidase subunit Vb, cytochrome c oxidase subunit 5b description:Cytochrome c oxidase, subunit Vb family protein. (Os01t0612200-01)
Sequence

ATGTGGCGCCGCCTCCAAACCCTGGCCCCGGCCCTGCGCCGCGCCGCCTCCGCCTCCGCC
TCCGCGGCGGCATCGGGCGCCGCGGGCCCCGCCTCCCTCGCCCGCGCCGCGCCGCTCTCC
ACGGCGGCCGCCGCCGCCTTCCGCCGCACCAGCCCTCTCCTGTCCGGGGACAAGCCGGCG
ACGGTGGAGGACGTCATGCCCATCGCCACGGGGCTGGAGCGCGAGGAGCTCGCGGCGGAG
CTCAAGGGGGAGAAGCGGTTCGACATGGATCCTCCCGTAGGCCCATTTGGTACCAAGGAG
GCCCCAGCTGTCATTGAATCCTACTATAACAAGAGGATAGTTGGTTGTCCTGGTGGTGAA
GGAGAGGATGAGCATGATGTTGTATGGTTCTGGTTGAAAAAAGATGAACCGCATGAGTGC
CCAGTCTGTTCACAATATTTTGTGCTTAAGGTCATTGGTGATGGTGGTGATCCAGATGGA
CATGATGATGACGACGAGCATCACCACTAA

Peptide Sequence

PEP ID

Os01t0612200-01
PEP Infomation

pep chromosome:IRGSP-1.0:1:24255379:24259940:1 gene:Os01g0612200 transcript:Os01t0612200-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:cytochrome c oxidase subunit Vb, cytochrome c oxidase subunit 5b description:Cytochrome c oxidase, subunit Vb family protein. (Os01t0612200-01)
Sequence

MWRRLQTLAPALRRAASASASAAASGAAGPASLARAAPLSTAAAAAFRRTSPLLSGDKPA
TVEDVMPIATGLEREELAAELKGEKRFDMDPPVGPFGTKEAPAVIESYYNKRIVGCPGGE
GEDEHDVVWFWLKKDEPHECPVCSQYFVLKVIGDGGDPDGHDDDDEHHH

Transcript Sequence

Transcript ID

Os01t0612200-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:1:24255379:24259940:1 gene:Os01g0612200 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:cytochrome c oxidase subunit Vb, cytochrome c oxidase subunit 5b description:Cytochrome c oxidase, subunit Vb family protein. (Os01t0612200-01)
Sequence

GCCTCCTCCTCCCTCCTCCCCATTCCCCCGCCGCCGCCGCCGAGGGCGCCGCGACCTGAG
AGCACACGCACGCCCGCCATGTGGCGCCGCCTCCAAACCCTGGCCCCGGCCCTGCGCCGC
GCCGCCTCCGCCTCCGCCTCCGCGGCGGCATCGGGCGCCGCGGGCCCCGCCTCCCTCGCC
CGCGCCGCGCCGCTCTCCACGGCGGCCGCCGCCGCCTTCCGCCGCACCAGCCCTCTCCTG
TCCGGGGACAAGCCGGCGACGGTGGAGGACGTCATGCCCATCGCCACGGGGCTGGAGCGC
GAGGAGCTCGCGGCGGAGCTCAAGGGGGAGAAGCGGTTCGACATGGATCCTCCCGTAGGC
CCATTTGGTACCAAGGAGGCCCCAGCTGTCATTGAATCCTACTATAACAAGAGGATAGTT
GGTTGTCCTGGTGGTGAAGGAGAGGATGAGCATGATGTTGTATGGTTCTGGTTGAAAAAA
GATGAACCGCATGAGTGCCCAGTCTGTTCACAATATTTTGTGCTTAAGGTCATTGGTGAT
GGTGGTGATCCAGATGGACATGATGATGACGACGAGCATCACCACTAAGGACGCCCATGC
CTCGTGGTTCTGATAATAAGAATTTGATGAGGCAGATGATTTCATTTAAACCTTTTTAGC
ACCAGACTGCTCTACGGCGTCCTTGTTTATGAATGCACACATTTGGCCATCAAGCAGGTG
GTAGTTTTTTCCTTAGGGATTTTGTCCAAACAAAAAACTCATCGAGGCTTGACCTGTGCA
TTTCCTTCGGAGCATCATCGAATAAAAGATGACTGCATCAGCTGCGTTTTTCTTGTGTAT
CCTAATGGCCATCTGGTGTGATGGACCTGTTCTATTCAGATCATGCAACAGTTTATTTTC
AGTGCTCAGTGAGTCCCTGTTTGCAAGCAGCCACTAAATCTTT