Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os01t0611000-02
CDS Infomation	cds chromosome:IRGSP-1.0:1:24181239:24183894:1 gene:Os01g0611000 gene_biotype:protein_coding transcript_biotype:protein_coding description:Protein of unknown function DUF642 domain containing protein. (Os01t0611000-01);Hypothetical conserved gene. (Os01t0611000-02)
Sequence	ACGGTGCTCGTTCTGCTCCTCGCCTGCGCGGCGGCGCGCGCCGCCGCCGCCGTCGTCACC GACGGGCTGTTGCCGAACGGCAACTTCGAGGAGGGCCCACCCAAGTCGGACCTGGTGAAC GGCACGGTGGTGCGCGGCGCGAACGCCATCCCGCGGTGGGAGACGTCCGGGTTCGTGGAG TACATCGAGTCCGGGCACAAGCAGGGGGACATGCTGCTGGTGGTGCCGCAGGGCGCGCAC GCCGTGCGCCTCGGCAACGAGGCGTCCATCCGGCAGCGGCTCGCCGTGACCAGGGGCGCC TACTACGCCGTCACGTTTAGCGCGGCGCGCACCTGCGCCCAGGCGGAGCAGCTCAACGTG TCGGTGAGCCCCGAGTGGGGGGTGCTCCCCATGCAGACCATCTACGGCAGCAACGGGTGG GACTCGTACGCGTGGGCGTTCAAGGCGAAGATGGACGAGGTGGCGCTCGTCATCCACAAC CCGGGCGTGGAGGAGGACCCGGCGTGCGGCCCGCTCATCGACGGCGTCGCCATCAGGGCG CTGTACCCGCCGACGCTGGCCAAGGGGAACATGCTCAAGAACGGCGGGTTCGAGGAGGGC CCCTACTTCCTCCCCAACGCGTCGTGGGGGGTGCTCGTCCCGCCCAACATCGAGGACGAC CACTCGCCGCTCCCGGCGTGGATGATCATGTCGTCCAAGGCCGTCAAGTACGTCGACGCC GCGCACTTCGCCGTGCCGCAGGGCGCCCGCGCCGTGGAGCTGGTGGGGGGCAAGGAGTCG GCGCTGGTGCAGGAGGTGCGCACCGTGCCCGGGTGGACGTACCGCCTGTCGTTCGCCGTG GGCGACGCGCGCGACGGGTGCGCGGGCTCCATGGTCGCCGAGGCGTACGCGGCGAGGGCC TCCATCAAGGTGCCGTACGAGTCCAAGGGCACCGGCGGGTACAAGCGCGCCGTCCTCGAG TTCGCCGCCATCGCCAACCGCACCCGCGTCGTGTTCCAGAGCACGTTCTACCACACCATG ACCGACGGCTCGCTCTGCGGGCCGGTCATCGACGACGCCTCCCTCGTCGGCCTCCGCAAG AAGACGGCCGGCCGGCGGCTGCTCCTGTAA

Peptide Sequence

PEP ID	Os01t0611000-02
PEP Infomation	pep chromosome:IRGSP-1.0:1:24181239:24183894:1 gene:Os01g0611000 transcript:Os01t0611000-02 gene_biotype:protein_coding transcript_biotype:protein_coding description:Protein of unknown function DUF642 domain containing protein. (Os01t0611000-01);Hypothetical conserved gene. (Os01t0611000-02)
Sequence	TVLVLLLACAAARAAAAVVTDGLLPNGNFEEGPPKSDLVNGTVVRGANAIPRWETSGFVE YIESGHKQGDMLLVVPQGAHAVRLGNEASIRQRLAVTRGAYYAVTFSAARTCAQAEQLNV SVSPEWGVLPMQTIYGSNGWDSYAWAFKAKMDEVALVIHNPGVEEDPACGPLIDGVAIRA LYPPTLAKGNMLKNGGFEEGPYFLPNASWGVLVPPNIEDDHSPLPAWMIMSSKAVKYVDA AHFAVPQGARAVELVGGKESALVQEVRTVPGWTYRLSFAVGDARDGCAGSMVAEAYAARA SIKVPYESKGTGGYKRAVLEFAAIANRTRVVFQSTFYHTMTDGSLCGPVIDDASLVGLRK KTAGRRLLL

Transcript Sequence

Transcript ID	Os01t0611000-02
Transcript Infomation	cdna chromosome:IRGSP-1.0:1:24181239:24183894:1 gene:Os01g0611000 gene_biotype:protein_coding transcript_biotype:protein_coding description:Protein of unknown function DUF642 domain containing protein. (Os01t0611000-01);Hypothetical conserved gene. (Os01t0611000-02)
Sequence	ACGGTGCTCGTTCTGCTCCTCGCCTGCGCGGCGGCGCGCGCCGCCGCCGCCGTCGTCACC GACGGGCTGTTGCCGAACGGCAACTTCGAGGAGGGCCCACCCAAGTCGGACCTGGTGAAC GGCACGGTGGTGCGCGGCGCGAACGCCATCCCGCGGTGGGAGACGTCCGGGTTCGTGGAG TACATCGAGTCCGGGCACAAGCAGGGGGACATGCTGCTGGTGGTGCCGCAGGGCGCGCAC GCCGTGCGCCTCGGCAACGAGGCGTCCATCCGGCAGCGGCTCGCCGTGACCAGGGGCGCC TACTACGCCGTCACGTTTAGCGCGGCGCGCACCTGCGCCCAGGCGGAGCAGCTCAACGTG TCGGTGAGCCCCGAGTGGGGGGTGCTCCCCATGCAGACCATCTACGGCAGCAACGGGTGG GACTCGTACGCGTGGGCGTTCAAGGCGAAGATGGACGAGGTGGCGCTCGTCATCCACAAC CCGGGCGTGGAGGAGGACCCGGCGTGCGGCCCGCTCATCGACGGCGTCGCCATCAGGGCG CTGTACCCGCCGACGCTGGCCAAGGGGAACATGCTCAAGAACGGCGGGTTCGAGGAGGGC CCCTACTTCCTCCCCAACGCGTCGTGGGGGGTGCTCGTCCCGCCCAACATCGAGGACGAC CACTCGCCGCTCCCGGCGTGGATGATCATGTCGTCCAAGGCCGTCAAGTACGTCGACGCC GCGCACTTCGCCGTGCCGCAGGGCGCCCGCGCCGTGGAGCTGGTGGGGGGCAAGGAGTCG GCGCTGGTGCAGGAGGTGCGCACCGTGCCCGGGTGGACGTACCGCCTGTCGTTCGCCGTG GGCGACGCGCGCGACGGGTGCGCGGGCTCCATGGTCGCCGAGGCGTACGCGGCGAGGGCC TCCATCAAGGTGCCGTACGAGTCCAAGGGCACCGGCGGGTACAAGCGCGCCGTCCTCGAG TTCGCCGCCATCGCCAACCGCACCCGCGTCGTGTTCCAGAGCACGTTCTACCACACCATG ACCGACGGCTCGCTCTGCGGGCCGGTCATCGACGACGCCTCCCTCGTCGGCCTCCGCAAG AAGACGGCCGGCCGGCGGCTGCTCCTGTAAGACGAACGGCCGCGTGGCATCGAACGCCGT CGCATTCCCTCCATTCTATGAATATATGAATACAAGGCGCGGTTAAACTTGGGGGCAGTT GGCACGACCAAAGTTGGGTGCTAAAATGGGTAGTATTGCTAGGCTCGTTTTTTTGGTTTT GGTGTGTACTCTGGTATATGTACGCGTGTGCGCGCGTTGCATGGTTATACTTTGGAGCTG CGCTCGTTTGGTGTTTTGTTGTGAAGAGGAGAGGTGATACGTGGTGCAAGGTCTGTCACA AGGGGTTTGGTTGATCAACTTAACCGGAGGTGCCAACCTAAACGCACCATCAGACATTAT GAATGGGAAGCATTACTAGTGCTCACTTTTTTAT