Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os01t0610300-01
CDS Infomation

cds chromosome:IRGSP-1.0:1:24136871:24144292:1 gene:Os01g0610300 gene_biotype:protein_coding transcript_biotype:protein_coding description:Bromo adjacent region domain containing protein. (Os01t0610300-01)
Sequence

ATGGATGGTAGTAATGAGAATATCCAATTCTCATGGGGGAAGAAGAGAGCAAAAGGTGGT
ATTAAGATGGATACACAGTTTTATGACTCCTTCACATTTGACAATGTGAAGTACTCACTG
TATGACAATGTATATCTTTTTAAGAGTGGTGAGTCTGAACCTTACATTGGAAAGATAATA
AAGATATGGCAGCAAAATCAGGCTAAGAAAGTAAAGATTCTTTGGTTTTTTCTCCCGGAT
GAGATTCGAAAACATTTAAGTGGCCCTGTAATGGAAAAGGAGATATTTCTTGCTTGTGGT
GAAGGCGTTGGCCTTGCTGATATCAACCCACTGGAAGCTATTGGTGGGAAATGCACTGTG
CTTTGCATTTCAAAGGATGAGAGGAATCGTCAACCTTCCCCCAGGGAACTAGCAATGGCT
GATTATATCTTCTACAGGTTTTTTGATGTTAACAGTTGCACACTTTCTGAACAATTACCT
GAGAAAATTGCAGGGGTGGAAGGAAATCTTTTGCTTAATTCAAAAGTTGAGCAAGTGACA
TCCTGTTCAGACCAGGAAGTGCATGGTGTTGATCAGAAGATGCTTAATGTCCCAGTTCCC
CTTCCCCAGTCAACGGTTATGGAGGATGAAAGTCCAGTTGCTGCAGTTTCCCTTCCCCCG
TCAGTATTCAAGGAGGAAAATGTGGCTTCAGCCATTCCCTTTCCCCAGCCAGTGGTCAAG
GAGGAAAGTGCGGCTGCTGCCATTCCCCCTCCCCATGTAGCACTGAAAGAGGAGAGTGTG
TCCAAATCTACAGAGAACATTACCAAACCTGCACAGAAAGTTCTCCCTGGGGAGAGGCCA
CCAAAGAGGGTCAAATTTTCTGAAAATGTTACAGTGCAAAATGTGCCATTAGATGTTCCT
GAAAGACCAAGTCGCACTGGACCTTTGGAACTAGCAGGTAGACAAGCTGACAGAAGCAAA
TGGTTCAAGATTCCATGGGATACCAGACTACGAAATGCTGATGAGCAGGGGACACTTGTG
TACATTCAAAATCTTGACATACAGTTTGCAGCTGCTGACATAGAGGAGCTTATACGTGAT
GCTTTACAACTAAATTGTATCGCTAAGCCTATTAACCACCCAACTTATGATGATCCAAAC
AATGGAAAAGCATATGCTATATTCAAAACAAAAAGTGCCGCAGACTCTGCTATTTCAAAA
ATTAATTCAGGCTTGGTGGTCGGTGGAAGACCCCTTTATTGCAGCAAAGGATTGCTTAAG
GTTCCAAAACCTTCAGAAACTCTTCTCGGGCACTTAACAATCAACAATATTAGAATGGGT
ATAAGACAACGAGAAGAACAGAAGAAGGCAGTTTCAACCTCGCATTGTTCTCAACCCAAT
ACAATGGAGTATGATTTGGCCTTGGATTGGATGCTTGTCCGAGCAAAGCAAGAAACGAAA
TTTAGGACACTTCACAAGAAGCATAAAGATGAGAGGAAGACCTTTGCGAGTAAGATGGGA
AAGTAA

Peptide Sequence

PEP ID

Os01t0610300-01
PEP Infomation

pep chromosome:IRGSP-1.0:1:24136871:24144292:1 gene:Os01g0610300 transcript:Os01t0610300-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Bromo adjacent region domain containing protein. (Os01t0610300-01)
Sequence

MDGSNENIQFSWGKKRAKGGIKMDTQFYDSFTFDNVKYSLYDNVYLFKSGESEPYIGKII
KIWQQNQAKKVKILWFFLPDEIRKHLSGPVMEKEIFLACGEGVGLADINPLEAIGGKCTV
LCISKDERNRQPSPRELAMADYIFYRFFDVNSCTLSEQLPEKIAGVEGNLLLNSKVEQVT
SCSDQEVHGVDQKMLNVPVPLPQSTVMEDESPVAAVSLPPSVFKEENVASAIPFPQPVVK
EESAAAAIPPPHVALKEESVSKSTENITKPAQKVLPGERPPKRVKFSENVTVQNVPLDVP
ERPSRTGPLELAGRQADRSKWFKIPWDTRLRNADEQGTLVYIQNLDIQFAAADIEELIRD
ALQLNCIAKPINHPTYDDPNNGKAYAIFKTKSAADSAISKINSGLVVGGRPLYCSKGLLK
VPKPSETLLGHLTINNIRMGIRQREEQKKAVSTSHCSQPNTMEYDLALDWMLVRAKQETK
FRTLHKKHKDERKTFASKMGK

Transcript Sequence

Transcript ID

Os01t0610300-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:1:24136871:24144292:1 gene:Os01g0610300 gene_biotype:protein_coding transcript_biotype:protein_coding description:Bromo adjacent region domain containing protein. (Os01t0610300-01)
Sequence

GCGTCCGTACTGAGACCCAACCACAAAAATCTCACCTCCTCCTCCTCCTCCCTCTCCCAC
CGCGGCCTCCTCCTGCTACCTGGGAGCCACGCGCCCCCGGCCTCCACCTCGCCGCCCTCC
TCGCCGGCGGCCGCCACGCGCTTATGGTGAGTGCACAGTGAGCTACAAGTTACCATTATC
AGAATGGATGGTAGTAATGAGAATATCCAATTCTCATGGGGGAAGAAGAGAGCAAAAGGT
GGTATTAAGATGGATACACAGTTTTATGACTCCTTCACATTTGACAATGTGAAGTACTCA
CTGTATGACAATGTATATCTTTTTAAGAGTGGTGAGTCTGAACCTTACATTGGAAAGATA
ATAAAGATATGGCAGCAAAATCAGGCTAAGAAAGTAAAGATTCTTTGGTTTTTTCTCCCG
GATGAGATTCGAAAACATTTAAGTGGCCCTGTAATGGAAAAGGAGATATTTCTTGCTTGT
GGTGAAGGCGTTGGCCTTGCTGATATCAACCCACTGGAAGCTATTGGTGGGAAATGCACT
GTGCTTTGCATTTCAAAGGATGAGAGGAATCGTCAACCTTCCCCCAGGGAACTAGCAATG
GCTGATTATATCTTCTACAGGTTTTTTGATGTTAACAGTTGCACACTTTCTGAACAATTA
CCTGAGAAAATTGCAGGGGTGGAAGGAAATCTTTTGCTTAATTCAAAAGTTGAGCAAGTG
ACATCCTGTTCAGACCAGGAAGTGCATGGTGTTGATCAGAAGATGCTTAATGTCCCAGTT
CCCCTTCCCCAGTCAACGGTTATGGAGGATGAAAGTCCAGTTGCTGCAGTTTCCCTTCCC
CCGTCAGTATTCAAGGAGGAAAATGTGGCTTCAGCCATTCCCTTTCCCCAGCCAGTGGTC
AAGGAGGAAAGTGCGGCTGCTGCCATTCCCCCTCCCCATGTAGCACTGAAAGAGGAGAGT
GTGTCCAAATCTACAGAGAACATTACCAAACCTGCACAGAAAGTTCTCCCTGGGGAGAGG
CCACCAAAGAGGGTCAAATTTTCTGAAAATGTTACAGTGCAAAATGTGCCATTAGATGTT
CCTGAAAGACCAAGTCGCACTGGACCTTTGGAACTAGCAGGTAGACAAGCTGACAGAAGC
AAATGGTTCAAGATTCCATGGGATACCAGACTACGAAATGCTGATGAGCAGGGGACACTT
GTGTACATTCAAAATCTTGACATACAGTTTGCAGCTGCTGACATAGAGGAGCTTATACGT
GATGCTTTACAACTAAATTGTATCGCTAAGCCTATTAACCACCCAACTTATGATGATCCA
AACAATGGAAAAGCATATGCTATATTCAAAACAAAAAGTGCCGCAGACTCTGCTATTTCA
AAAATTAATTCAGGCTTGGTGGTCGGTGGAAGACCCCTTTATTGCAGCAAAGGATTGCTT
AAGGTTCCAAAACCTTCAGAAACTCTTCTCGGGCACTTAACAATCAACAATATTAGAATG
GGTATAAGACAACGAGAAGAACAGAAGAAGGCAGTTTCAACCTCGCATTGTTCTCAACCC
AATACAATGGAGTATGATTTGGCCTTGGATTGGATGCTTGTCCGAGCAAAGCAAGAAACG
AAATTTAGGACACTTCACAAGAAGCATAAAGATGAGAGGAAGACCTTTGCGAGTAAGATG
GGAAAGTAAGTGGCTTCCATGGATTTGGTTAAGCGATGGGAACTGTCCTGTTCCGTGCTT
ATCTTGGAGTCCTCTACTGAGTACTGACTATCATTCCTCGGAGCTTTATGCACTTTTTGC
CTGAAGCAACACTTATCTGCGAGTTTTTCTGCTGCGCAAGAATGAAATGCAACGACCATT
TGAGGGGGACAACTAACTGCACCACACTGACTCTGCTCATGTTCCGTAGAGCATTATTTT
TAGAAAGGAAAGAATTGTGCCATAGCTTAAGAAACCAAAGTAACATTGGTAGAAGTAGCC
CTTGCAGCAAGTTAGGAAAGCCAGAGGCTGTTTTAGGTTACCCCGCACATCAATTTGATC
TCACATGGACACATCAGTTAGATCTGTTGCTCCATGTTAGATAGCAAATCAACGCGTGCC
GTCATGAAATGTGTATGTATATATTTTTAAATTCATGACCTGGCTATTAGTTCATTCATG
TG