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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os01t0610100-01
CDS Infomation

cds chromosome:IRGSP-1.0:1:24126625:24129621:1 gene:Os01g0610100 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Clone ZZZ51 mRNA sequence. (Os01t0610100-01)
Sequence

ATGTCGTCTGATTCGTCGTCGTGGGCGCGCGCGCTCGTGCAGATCTCGCCCTACACCTTC
TCCGCCATCGGCATAGCCGTCTCCATCGGCGTCTCCGTCCTCGGCGCCGCCTGGGGGATC
TTCATCACGGGGAGCAGCCTCATCGGGGCCGCCATCAAGGCCCCCAGGATCACCTCCAAG
AACCTCATCAGTGTCATCTTCTGTGAGGCTGTTGCAATTTATGGTGTTATCGTGGCAATC
ATCCTCCAAACTAAGCTTGAAAGTGTACCAACTGCTCTAGTGCATCATCCAGAGTCTCTC
CGGGCTGGCTATGCAATCTTTGCGTCTGGTCTTATTGTTGGCTTTGCTAATCTTGTTTGC
GGGGTTTGTGTGGGAATAATTGGAAGCAGCTGTGCATTGTCTGATGCTCAGAATTCATCA
CTCTTTGTAAAGATCTTGGTGATTGAGATCTTCGGCAGCGCCTTGGGTCTGTTTGGAGTG
ATTGTGGGCATAATCATGTCATCTCAAGCAACATGGCCTGCAAAAGCCTAG

Peptide Sequence

PEP ID

Os01t0610100-01
PEP Infomation

pep chromosome:IRGSP-1.0:1:24126625:24129621:1 gene:Os01g0610100 transcript:Os01t0610100-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Clone ZZZ51 mRNA sequence. (Os01t0610100-01)
Sequence

MSSDSSSWARALVQISPYTFSAIGIAVSIGVSVLGAAWGIFITGSSLIGAAIKAPRITSK
NLISVIFCEAVAIYGVIVAIILQTKLESVPTALVHHPESLRAGYAIFASGLIVGFANLVC
GVCVGIIGSSCALSDAQNSSLFVKILVIEIFGSALGLFGVIVGIIMSSQATWPAKA

Transcript Sequence

Transcript ID

Os01t0610100-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:1:24126625:24129621:1 gene:Os01g0610100 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Clone ZZZ51 mRNA sequence. (Os01t0610100-01)
Sequence

GTGCCATCGTGTGACGACGTCTCGTCTCGTCTCCCTCTCCCGACCCGACACCCGAGTCTT
CTTCCCTTCCCCAATCTCGCCCTTCCTCCTCCTCCGATCGATCCAGCCCCCGCCCCTCCC
CGCCCCTCGCCGCGCGCGCGAAGGAGAGAGAGAGAGAGAGGGAGAGAGGGAGGGAGATCG
CCTCGCCGCCGCGGCGTGGGATCCGGAGGTGGTGTAGCGAGGATGTCGTCTGATTCGTCG
TCGTGGGCGCGCGCGCTCGTGCAGATCTCGCCCTACACCTTCTCCGCCATCGGCATAGCC
GTCTCCATCGGCGTCTCCGTCCTCGGCGCCGCCTGGGGGATCTTCATCACGGGGAGCAGC
CTCATCGGGGCCGCCATCAAGGCCCCCAGGATCACCTCCAAGAACCTCATCAGTGTCATC
TTCTGTGAGGCTGTTGCAATTTATGGTGTTATCGTGGCAATCATCCTCCAAACTAAGCTT
GAAAGTGTACCAACTGCTCTAGTGCATCATCCAGAGTCTCTCCGGGCTGGCTATGCAATC
TTTGCGTCTGGTCTTATTGTTGGCTTTGCTAATCTTGTTTGCGGGGTTTGTGTGGGAATA
ATTGGAAGCAGCTGTGCATTGTCTGATGCTCAGAATTCATCACTCTTTGTAAAGATCTTG
GTGATTGAGATCTTCGGCAGCGCCTTGGGTCTGTTTGGAGTGATTGTGGGCATAATCATG
TCATCTCAAGCAACATGGCCTGCAAAAGCCTAGTTCTATTCATATGGCAATCTGTAAATT
ATTTCGGGGAGACCTATCAGAAGAATATCTGGTCCAGTTGTTTTTATTTCTTTTTTTTTG
TTTGTGCATTTTTGGCAAATCACGTATATTGATGCTTGATGCATCTGACGGTAGAGATAC
TGTTCCTACTGTAAAGACTACATAACTGCTGCGTATCTTGTAGGTGCTATTGCTTTTGCA
GAGTGTGGTCTGCGTATTGAATAAAACCATTGAACTCAGGAATAAAATACTTCAAACAAC
ATTTTGCTC