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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os01t0605700-01
CDS Infomation

cds chromosome:IRGSP-1.0:1:23864681:23867205:1 gene:Os01g0605700 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:SWEET6B description:MtN3 and saliva related transmembrane protein family protein. (Os01t0605700-01)
Sequence

ATGATCTCCCCGGACGCGGCTCGCAACGTCGTCGGCATCATCGGCAATGTCATCTCCTTC
GGCCTCTTCCTCTCCCCCGTGCCGACGTTCTGGAGGATCTGCAAGAGGAAGGACGTGGAG
CAGTTCAAGGCGGACCCGTACCTGGCGACGCTGCTCAACTGCATGCTATGGGTGTTCTAC
GGTATCCCCATCGTCCACCCGAACAGCATCCTCGTCGTCACCATCAACGGCATCGGTCTC
ATTGTCGAGGGCACCTACCTCTTCATCTTCTTCCTCTACTCCCCCAACAAGAAGCGCCTG
AGGATGTTGGCTGTGCTGGGCGTGGAGTTGGTGTTCATGCTGGCGGTGATTCTGGGCGTG
CTTCTGAGCGCGCACACGCACAAGAAGCGTTCCATGATCGTCGGCATCCTCTGCGTCTTC
TTCGGCTCCATCATGTACTTCTCCCCGCTCACCATCATGGGGAAAGTGATAAAGACGAAG
AGCGTAGAGTACATGCCGTTCTTCCTGTCGCTGGTGTGCTTCCTCAACGGCGTTTGCTGG
ACGGCCTACGCGCTCATCCGCTTCGACATCTATGTGACCATCCCCAACGGCCTCGGTGCC
ATCTTCGGTGCCATCCAGCTCATCCTCTACGCCTGCTACTACCGGACCACACCCAAGAAG
ACCAAGGCCGCCAAGGACGTCGAGATGCCCTCCGTCATCTCCGGTCCCGGTGCCGCCGCC
ACCGCCAGTGGCGGCAGTGTCGTCTCCGTCACCGTCGAGCGATAA

Peptide Sequence

PEP ID

Os01t0605700-01
PEP Infomation

pep chromosome:IRGSP-1.0:1:23864681:23867205:1 gene:Os01g0605700 transcript:Os01t0605700-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:SWEET6B description:MtN3 and saliva related transmembrane protein family protein. (Os01t0605700-01)
Sequence

MISPDAARNVVGIIGNVISFGLFLSPVPTFWRICKRKDVEQFKADPYLATLLNCMLWVFY
GIPIVHPNSILVVTINGIGLIVEGTYLFIFFLYSPNKKRLRMLAVLGVELVFMLAVILGV
LLSAHTHKKRSMIVGILCVFFGSIMYFSPLTIMGKVIKTKSVEYMPFFLSLVCFLNGVCW
TAYALIRFDIYVTIPNGLGAIFGAIQLILYACYYRTTPKKTKAAKDVEMPSVISGPGAAA
TASGGSVVSVTVER

Transcript Sequence

Transcript ID

Os01t0605700-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:1:23864681:23867205:1 gene:Os01g0605700 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:SWEET6B description:MtN3 and saliva related transmembrane protein family protein. (Os01t0605700-01)
Sequence

AAAGTTCCCAACCAAAAATCCCATCTCCTCCGATCCCTTCCTTTCCTGCCATCTAGCTAG
CAAAGATGATCTCCCCGGACGCGGCTCGCAACGTCGTCGGCATCATCGGCAATGTCATCT
CCTTCGGCCTCTTCCTCTCCCCCGTGCCGACGTTCTGGAGGATCTGCAAGAGGAAGGACG
TGGAGCAGTTCAAGGCGGACCCGTACCTGGCGACGCTGCTCAACTGCATGCTATGGGTGT
TCTACGGTATCCCCATCGTCCACCCGAACAGCATCCTCGTCGTCACCATCAACGGCATCG
GTCTCATTGTCGAGGGCACCTACCTCTTCATCTTCTTCCTCTACTCCCCCAACAAGAAGC
GCCTGAGGATGTTGGCTGTGCTGGGCGTGGAGTTGGTGTTCATGCTGGCGGTGATTCTGG
GCGTGCTTCTGAGCGCGCACACGCACAAGAAGCGTTCCATGATCGTCGGCATCCTCTGCG
TCTTCTTCGGCTCCATCATGTACTTCTCCCCGCTCACCATCATGGGGAAAGTGATAAAGA
CGAAGAGCGTAGAGTACATGCCGTTCTTCCTGTCGCTGGTGTGCTTCCTCAACGGCGTTT
GCTGGACGGCCTACGCGCTCATCCGCTTCGACATCTATGTGACCATCCCCAACGGCCTCG
GTGCCATCTTCGGTGCCATCCAGCTCATCCTCTACGCCTGCTACTACCGGACCACACCCA
AGAAGACCAAGGCCGCCAAGGACGTCGAGATGCCCTCCGTCATCTCCGGTCCCGGTGCCG
CCGCCACCGCCAGTGGCGGCAGTGTCGTCTCCGTCACCGTCGAGCGATAAATTAAGTAAA
ATTAAATTAATTAGCTTGTGTTAATTTTGGTGGTAGTTTTTTCGGCTCGATATATATGAT
CTAAGTGAGAGTGTAATATTTACCTATATAGTTGAAGTTTGATGAGACAATACAATGATA
CAATATCACCCGCCAGTGGCGGATTTAGGCT