Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os01t0605300-01
CDS Infomation	cds chromosome:IRGSP-1.0:1:23843274:23846735:1 gene:Os01g0605300 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:UBIQUITIN-CONJUGATING ENZYME 48 description:Similar to Likely ubiquitin-conjugating enzyme e2. (Os01t0605300-01)
Sequence	ATGGCTCAGGCTGCAAGACTGAATCTGCGAATGCAGAAAGAGGTTAAGCTTCTTCTAAAT GATCCACCTCATGGGGTCTCCCTTAATCTTTCTGGGGATGAAAGTGCCTTGTCATCGTTG TTGAGTTTCGAGGCCAGAATACAGGGACCTGATGAAACTGTTTATTCAAAAGGAGTTTTT GTTCTGAAGATCCAAATTCCTGAAAGATATCCTTTTCAACCTCCCAATGTGACATTTGTT ACTCCTATTTATCATCCCAACATAGACAATGGAGGACGAATTTGCCTTGATATACTAAAT TTACCACCAAAGGGTGCCTGGCAACCATCGCTCAACATTGCTACTGTTTTGACAAGCATT GGTTTGCTGCTAAGTGACCCAAACCCTGACGATGGGCTGATGGCTGAAATAAGTCGAGAG TACAAATACAACAGACAAGTTTTTGACATAAATGCTCGGTCCTGGACTGAAAAGTATGCT AATCCTTCAGCAATTGGCGCTAGTGGTTGGAGCTCTGTAGATGTTTCAACCCTGGCACCA AACATACAAGAGGAGAAGCTAAGCCTGGAGCCTTTGCCAAAAGCTTCAAATAAAAATTGT GATGGGAGTAGAAAGAAGATGAGGCTACTTAGTCAAAAGTTATCTCTGAAATCAGTACCT GAAGAGAATACCACCACTGGCAAAAAGGACCTGGTGACAAACCACTTATCATCGACAGCA AGACCCACTGATCCTACTGCATGCTTGTCTGATGTTTCAGGCAAACTGAATGATACCTCA GAAAGCATATCTGTCATCGCAGATAGTGCAGTGACTTCAAAGAAAGAATACCAAGGAACT AGAAGGAACTTGCAGTTACTTGGGCAGGGGCTTCCTGTTACATCAGAAGGTCCTAGCAAG AACAGTAATGGCAGTGTGGAAGATAAGTTACCTAATCATCTTCTAGCATCAGCATCATCG AACACTAAGCATCCTGTCATGGGATCTTCTGATAATGCTTTAGAGAAGAGTAGTGCAAAG CGCATTGGTGAGTCATTAGATAGCTTGTATAAAGCATCAGAAGGCGATGGTACAAATGTG AGGTCACTTGGTCAGAAGTTGTCACTGAAATCGGCAAAGCCTGAAAGCAAGAGCAATGTT CAGAAGGAAAACATGGCTCCAAATCATCTGCCTTCATTGTCAGGCTTCAGTAATCTGGAT AAAAGACAATCGCATGTTATTTCAGGGGGAAATTCCATTGGGCATACTAATCTGGTTCAA CAAAATTCTAACAACGAAAATGTACTTCCAAGTACCCAGTTGATACCAAGTAAAGAATGC AATCAAGGCCGAAAGAAGCTGCATTTACTAAGTAAGAGGCTGTCATTGAAATCTGAGCTG CCTGCAGACAAGACCATTGAGAAGGAATATATGCAAACAGATTGTTCTCAAAACAACAGG AAGCCCAATGAACTTCCGTTGTCAGCGCCTGTCCTCAAAAATCAGATCTTGGGTACCATT GATCCACAGAAAGATGCCAGGCAAAGCAAGTCTTCCATCCAACAAAACACAACTCCTGTG GAGAGGATTGTTGTTTCAGATAGTGAAGATAGTGCTGATGAATGTGAAAGACCTTCAAGA TCAAGGCTCTCATTGATGAGGAGACGATTGGCTGGAAAACCAAGAAGCTAA

Peptide Sequence

PEP ID	Os01t0605300-01
PEP Infomation	pep chromosome:IRGSP-1.0:1:23843274:23846735:1 gene:Os01g0605300 transcript:Os01t0605300-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:UBIQUITIN-CONJUGATING ENZYME 48 description:Similar to Likely ubiquitin-conjugating enzyme e2. (Os01t0605300-01)
Sequence	MAQAARLNLRMQKEVKLLLNDPPHGVSLNLSGDESALSSLLSFEARIQGPDETVYSKGVF VLKIQIPERYPFQPPNVTFVTPIYHPNIDNGGRICLDILNLPPKGAWQPSLNIATVLTSI GLLLSDPNPDDGLMAEISREYKYNRQVFDINARSWTEKYANPSAIGASGWSSVDVSTLAP NIQEEKLSLEPLPKASNKNCDGSRKKMRLLSQKLSLKSVPEENTTTGKKDLVTNHLSSTA RPTDPTACLSDVSGKLNDTSESISVIADSAVTSKKEYQGTRRNLQLLGQGLPVTSEGPSK NSNGSVEDKLPNHLLASASSNTKHPVMGSSDNALEKSSAKRIGESLDSLYKASEGDGTNV RSLGQKLSLKSAKPESKSNVQKENMAPNHLPSLSGFSNLDKRQSHVISGGNSIGHTNLVQ QNSNNENVLPSTQLIPSKECNQGRKKLHLLSKRLSLKSELPADKTIEKEYMQTDCSQNNR KPNELPLSAPVLKNQILGTIDPQKDARQSKSSIQQNTTPVERIVVSDSEDSADECERPSR SRLSLMRRRLAGKPRS

Transcript Sequence

Transcript ID	Os01t0605300-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:1:23843274:23846735:1 gene:Os01g0605300 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:UBIQUITIN-CONJUGATING ENZYME 48 description:Similar to Likely ubiquitin-conjugating enzyme e2. (Os01t0605300-01)
Sequence	CTCGTTTTTGCTTGCCTTTCGCGACGCCGCGCCATCGCCTTCACTTCTTCCCGCCTCTCG CCTCCAAAAATCCCCTTCGAAACGAGACGCGGGAGCTCGCGATCGCCGGGCGCAACCGAG GAGGAGGAGGAAGACCCTTGCCGTTGTGGCCGCCGGAGCTGGTCGCCGTTGATGCGGCAG GCCGATACCCTTTAAATTATTAGATGGCTCAGGCTGCAAGACTGAATCTGCGAATGCAGA AAGAGGTTAAGCTTCTTCTAAATGATCCACCTCATGGGGTCTCCCTTAATCTTTCTGGGG ATGAAAGTGCCTTGTCATCGTTGTTGAGTTTCGAGGCCAGAATACAGGGACCTGATGAAA CTGTTTATTCAAAAGGAGTTTTTGTTCTGAAGATCCAAATTCCTGAAAGATATCCTTTTC AACCTCCCAATGTGACATTTGTTACTCCTATTTATCATCCCAACATAGACAATGGAGGAC GAATTTGCCTTGATATACTAAATTTACCACCAAAGGGTGCCTGGCAACCATCGCTCAACA TTGCTACTGTTTTGACAAGCATTGGTTTGCTGCTAAGTGACCCAAACCCTGACGATGGGC TGATGGCTGAAATAAGTCGAGAGTACAAATACAACAGACAAGTTTTTGACATAAATGCTC GGTCCTGGACTGAAAAGTATGCTAATCCTTCAGCAATTGGCGCTAGTGGTTGGAGCTCTG TAGATGTTTCAACCCTGGCACCAAACATACAAGAGGAGAAGCTAAGCCTGGAGCCTTTGC CAAAAGCTTCAAATAAAAATTGTGATGGGAGTAGAAAGAAGATGAGGCTACTTAGTCAAA AGTTATCTCTGAAATCAGTACCTGAAGAGAATACCACCACTGGCAAAAAGGACCTGGTGA CAAACCACTTATCATCGACAGCAAGACCCACTGATCCTACTGCATGCTTGTCTGATGTTT CAGGCAAACTGAATGATACCTCAGAAAGCATATCTGTCATCGCAGATAGTGCAGTGACTT CAAAGAAAGAATACCAAGGAACTAGAAGGAACTTGCAGTTACTTGGGCAGGGGCTTCCTG TTACATCAGAAGGTCCTAGCAAGAACAGTAATGGCAGTGTGGAAGATAAGTTACCTAATC ATCTTCTAGCATCAGCATCATCGAACACTAAGCATCCTGTCATGGGATCTTCTGATAATG CTTTAGAGAAGAGTAGTGCAAAGCGCATTGGTGAGTCATTAGATAGCTTGTATAAAGCAT CAGAAGGCGATGGTACAAATGTGAGGTCACTTGGTCAGAAGTTGTCACTGAAATCGGCAA AGCCTGAAAGCAAGAGCAATGTTCAGAAGGAAAACATGGCTCCAAATCATCTGCCTTCAT TGTCAGGCTTCAGTAATCTGGATAAAAGACAATCGCATGTTATTTCAGGGGGAAATTCCA TTGGGCATACTAATCTGGTTCAACAAAATTCTAACAACGAAAATGTACTTCCAAGTACCC AGTTGATACCAAGTAAAGAATGCAATCAAGGCCGAAAGAAGCTGCATTTACTAAGTAAGA GGCTGTCATTGAAATCTGAGCTGCCTGCAGACAAGACCATTGAGAAGGAATATATGCAAA CAGATTGTTCTCAAAACAACAGGAAGCCCAATGAACTTCCGTTGTCAGCGCCTGTCCTCA AAAATCAGATCTTGGGTACCATTGATCCACAGAAAGATGCCAGGCAAAGCAAGTCTTCCA TCCAACAAAACACAACTCCTGTGGAGAGGATTGTTGTTTCAGATAGTGAAGATAGTGCTG ATGAATGTGAAAGACCTTCAAGATCAAGGCTCTCATTGATGAGGAGACGATTGGCTGGAA AACCAAGAAGCTAACTTGACCCAAAATCTTCGGCGTTTCATAGGCTACCGTGTAAAGTCA TGGAAGATGGCAATGCTTCAGTAAATTCTCTTGACTGTTTATGATCACATATGTGATACG TTCTTATCTTTATGTTGCCCTATCTATGATATGGGTGTTCGGACTTCGG