Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os01t0603800-01
CDS Infomation	cds chromosome:IRGSP-1.0:1:23776466:23779747:1 gene:Os01g0603800 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:OsSTA22 description:Similar to Triticum sp. (pAWJL3) leucine rich repeat region mRNA (Fragment). (Os01t0603800-01)
Sequence	ATGGCTAGAATGGCTAGAACTCCAGTTCATCCACGATCGTCCTCGATTGTAGCTGCATTC ACTTACCTTTTGCTAGTCCTCTTCCGAGACGCCATCACCACCGCAGCTGCATCTCCCAAA GCTCCGGCATCCACCAATGGCTGCATTGCAGCCGAGAGGGATGCCCTGCTCTCGTTCAAG GCTGGCATCACAAGAGACCCCAAGAAACGCCTCAGCTCATGGCTAGGTGAGAATTGCTGC CAGTGGAGCGGTGTGAGGTGTAGCAACAGGACGGGGCATGTTATCATCCTCAACCTCAGC AACACTTACTTATATTATGATGATCCGCATTATTACAAGTGCGCCCATGTTGATTTTCCG CTGTATGGGTACATAAGTTCGTCTTTGGTAAGTCTACGACAACTGAAACGCCTAGATCTT AGTGGGAACGTCCTTGGAGAAAGTATGCCAGAGTTCTTGGGCTCCTTTCAAAGTTTGACC CATCTCAACCTAGCACGTATGGGTTTTTACGGCAGAGTACCTCATCAGCTTGGTAATCTG TCTAATTTGCAGTTTCTTGACATAACATCTGAAATTTATGACCATCCTCCTATGCACACA GCTGACATCTCATGGTTGGCACGCCTTCCTTCATTGAAGTATCTTGATATGAGTTATGTG AATCTAAGCTCAGTGGTTGATTGGGTCCGTCCAGTGAATATGCTTTCCCGTCTTGAGGTT CTACGCCTTACAGGGTGTTGGATCATGAGTTCATCATCAACAGGACTCACCAATCTGACA AGCCTTGAAACACTTGACCTCTCTGAGAACACTTTGTTTGGCACGGTAATTCCCAACTGG GTGTGGAGCATGAAGACGGTTAAGATGCTTAACCTGGCCTCATGCCAGTTGTCTGGTTCA TTTCCTGATGGATTAGGCAACTTAACTTTGTTGGAAGGCCTTAACCTTGGAGGTGATAGC TACCATGGAAGTAATAGCTTCGAAGGGACGCTGCCATCAACATTAAACAACACTTGCAAT CTGAGGGTCCTATACCTCAATGAGAATTTGATCGGCGTGGAAATCAAAGATCTGATGGAT AAGCTTCCAAGCTGTACTTGGAATAAATTGGAGGAGCTTGATTTGTCTTATAATGACATT ACTGGAAACCTGGATTGGCTGGGGAGCCAAACTAGCTTAACAAGCCTTTACCTATCTTGG AACAAATTCAGTGGTCATTTGCCCTTGCTAATCAGAGAAATGGCTAATTTGACAACTCTA ATTCTACATAACAATAATATCAGTGGTGTGATCTCAAACCAGCATCTTTCAGGCCTTGAG AGTTTGGAGAGAATCATTATGTCTTATAATCCTTTAAAGGTAGTGCTGGACGAAAGTTGG AGCCCTCCCTTTGGATTGTTCGATGTTTATTTTGCATCTTGCCAACTGGGTCCAGAATTT CCTGTGTGGATCAAATCGTTGAATAATTGTTACTCAATTGATGTTTCAAGTTCAGGCATA AAAGATGAGCTTCCTAATTGGTTCTGGAATTTAGTTTCTGACGTTGCAAACGTAAATATA TCTCATAATCAGATCAGAGGGAAGTTACCAGACAGTTTTCAAGGTATGTCAACTGAAAAG CTCATTCTAGCTTCGAACCAGCTGACTGGTCGCCTGCCATCGTTACAGGAAAATCTCTAT TATTTGGACATTTCCAGAAACTTATTGTCTGGTCCGCTGCCATTTCATTTTGGTGGCGCA AATCTTGGTAAACTCATTCTCTTTTCCAACCATATCAATGGCAGCATTCCACAGTCCCTT TGCAAGATGCACAATTTGGGTGCCTTGGATTTAGCAGACAATTTTCTGGTAGGAGAACTT CCTCACTGTTTGCCGACAGAACTGAAACCATCGACTGGTGGTAGTTTTATACATTCCACA AGTCTGAACATTCATATCCTTTTACTAAGCAAAAATCAGCTTTCTGGAGAGTTCCCTATG CTATTGCAATCGTGCCAAAGCATCACCATTCTTGATCTAGCATGGAACAAATATTCTGGA AAGTTGCCGGAGTGGATAGGTGAAAAGTTGCCATCCATAGTAATTCTGCTATCAGGTCTA ATAAGTTCTCTGGTCATATCCCAGGTGGTTTTACCAAACTTGATCATCTGCGGTATTTGG ATATAG

Peptide Sequence

PEP ID	Os01t0603800-01
PEP Infomation	pep chromosome:IRGSP-1.0:1:23776466:23779747:1 gene:Os01g0603800 transcript:Os01t0603800-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:OsSTA22 description:Similar to Triticum sp. (pAWJL3) leucine rich repeat region mRNA (Fragment). (Os01t0603800-01)
Sequence	MARMARTPVHPRSSSIVAAFTYLLLVLFRDAITTAAASPKAPASTNGCIAAERDALLSFK AGITRDPKKRLSSWLGENCCQWSGVRCSNRTGHVIILNLSNTYLYYDDPHYYKCAHVDFP LYGYISSSLVSLRQLKRLDLSGNVLGESMPEFLGSFQSLTHLNLARMGFYGRVPHQLGNL SNLQFLDITSEIYDHPPMHTADISWLARLPSLKYLDMSYVNLSSVVDWVRPVNMLSRLEV LRLTGCWIMSSSSTGLTNLTSLETLDLSENTLFGTVIPNWVWSMKTVKMLNLASCQLSGS FPDGLGNLTLLEGLNLGGDSYHGSNSFEGTLPSTLNNTCNLRVLYLNENLIGVEIKDLMD KLPSCTWNKLEELDLSYNDITGNLDWLGSQTSLTSLYLSWNKFSGHLPLLIREMANLTTL ILHNNNISGVISNQHLSGLESLERIIMSYNPLKVVLDESWSPPFGLFDVYFASCQLGPEF PVWIKSLNNCYSIDVSSSGIKDELPNWFWNLVSDVANVNISHNQIRGKLPDSFQGMSTEK LILASNQLTGRLPSLQENLYYLDISRNLLSGPLPFHFGGANLGKLILFSNHINGSIPQSL CKMHNLGALDLADNFLVGELPHCLPTELKPSTGGSFIHSTSLNIHILLLSKNQLSGEFPM LLQSCQSITILDLAWNKYSGKLPEWIGEKLPSIVILLSGLISSLVISQVVLPNLIICGIW I

Transcript Sequence

Transcript ID	Os01t0603800-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:1:23776466:23779747:1 gene:Os01g0603800 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:OsSTA22 description:Similar to Triticum sp. (pAWJL3) leucine rich repeat region mRNA (Fragment). (Os01t0603800-01)
Sequence	ATTGCATTGCGTAGCGTGGACTATCACTAACACACAATGGCTAGAATGGCTAGAACTCCA GTTCATCCACGATCGTCCTCGATTGTAGCTGCATTCACTTACCTTTTGCTAGTCCTCTTC CGAGACGCCATCACCACCGCAGCTGCATCTCCCAAAGCTCCGGCATCCACCAATGGCTGC ATTGCAGCCGAGAGGGATGCCCTGCTCTCGTTCAAGGCTGGCATCACAAGAGACCCCAAG AAACGCCTCAGCTCATGGCTAGGTGAGAATTGCTGCCAGTGGAGCGGTGTGAGGTGTAGC AACAGGACGGGGCATGTTATCATCCTCAACCTCAGCAACACTTACTTATATTATGATGAT CCGCATTATTACAAGTGCGCCCATGTTGATTTTCCGCTGTATGGGTACATAAGTTCGTCT TTGGTAAGTCTACGACAACTGAAACGCCTAGATCTTAGTGGGAACGTCCTTGGAGAAAGT ATGCCAGAGTTCTTGGGCTCCTTTCAAAGTTTGACCCATCTCAACCTAGCACGTATGGGT TTTTACGGCAGAGTACCTCATCAGCTTGGTAATCTGTCTAATTTGCAGTTTCTTGACATA ACATCTGAAATTTATGACCATCCTCCTATGCACACAGCTGACATCTCATGGTTGGCACGC CTTCCTTCATTGAAGTATCTTGATATGAGTTATGTGAATCTAAGCTCAGTGGTTGATTGG GTCCGTCCAGTGAATATGCTTTCCCGTCTTGAGGTTCTACGCCTTACAGGGTGTTGGATC ATGAGTTCATCATCAACAGGACTCACCAATCTGACAAGCCTTGAAACACTTGACCTCTCT GAGAACACTTTGTTTGGCACGGTAATTCCCAACTGGGTGTGGAGCATGAAGACGGTTAAG ATGCTTAACCTGGCCTCATGCCAGTTGTCTGGTTCATTTCCTGATGGATTAGGCAACTTA ACTTTGTTGGAAGGCCTTAACCTTGGAGGTGATAGCTACCATGGAAGTAATAGCTTCGAA GGGACGCTGCCATCAACATTAAACAACACTTGCAATCTGAGGGTCCTATACCTCAATGAG AATTTGATCGGCGTGGAAATCAAAGATCTGATGGATAAGCTTCCAAGCTGTACTTGGAAT AAATTGGAGGAGCTTGATTTGTCTTATAATGACATTACTGGAAACCTGGATTGGCTGGGG AGCCAAACTAGCTTAACAAGCCTTTACCTATCTTGGAACAAATTCAGTGGTCATTTGCCC TTGCTAATCAGAGAAATGGCTAATTTGACAACTCTAATTCTACATAACAATAATATCAGT GGTGTGATCTCAAACCAGCATCTTTCAGGCCTTGAGAGTTTGGAGAGAATCATTATGTCT TATAATCCTTTAAAGGTAGTGCTGGACGAAAGTTGGAGCCCTCCCTTTGGATTGTTCGAT GTTTATTTTGCATCTTGCCAACTGGGTCCAGAATTTCCTGTGTGGATCAAATCGTTGAAT AATTGTTACTCAATTGATGTTTCAAGTTCAGGCATAAAAGATGAGCTTCCTAATTGGTTC TGGAATTTAGTTTCTGACGTTGCAAACGTAAATATATCTCATAATCAGATCAGAGGGAAG TTACCAGACAGTTTTCAAGGTATGTCAACTGAAAAGCTCATTCTAGCTTCGAACCAGCTG ACTGGTCGCCTGCCATCGTTACAGGAAAATCTCTATTATTTGGACATTTCCAGAAACTTA TTGTCTGGTCCGCTGCCATTTCATTTTGGTGGCGCAAATCTTGGTAAACTCATTCTCTTT TCCAACCATATCAATGGCAGCATTCCACAGTCCCTTTGCAAGATGCACAATTTGGGTGCC TTGGATTTAGCAGACAATTTTCTGGTAGGAGAACTTCCTCACTGTTTGCCGACAGAACTG AAACCATCGACTGGTGGTAGTTTTATACATTCCACAAGTCTGAACATTCATATCCTTTTA CTAAGCAAAAATCAGCTTTCTGGAGAGTTCCCTATGCTATTGCAATCGTGCCAAAGCATC ACCATTCTTGATCTAGCATGGAACAAATATTCTGGAAAGTTGCCGGAGTGGATAGGTGAA AAGTTGCCATCCATAGTAATTCTGCTATCAGGTCTAATAAGTTCTCTGGTCATATCCCAG GTGGTTTTACCAAACTTGATCATCTGCGGTATTTGGATATAGCTAATAATAGTTTTTCTG GTACTATCCCACAATCCCTTCCGTGCTTGAAAGGAATGATCAACGAACCAGAAAATTTAG AAACATGGTTCCTATTTGGAGAGGCACTGGAAAACGGATTCGGAGCTTTCGATGTATTCG GCCTGTTCCATTATAGCATATCATGTGTTCTGCAAGGTCAACAACTTGAATACAGCAAGG GACTTGTGTACTTGGTGGGCCTTGATTTTTCTAGCAACAAATTGTCTGGCCATATTCCAA AGGAGATTGGTTCTCTTGTCGAATTGGTAAATTTGAATCTGTCCTGGAACCAGTTAGCAG GAAACATTCCGGATCAGATTGGTGAGCTGCACCAATTAACCTCCCTTGACCTATCATATA ATCAATTTTCTGGAGAAATCCCTTCAAGCCTATCAAATTTGACATTCTTGAGCTATCTGA ACTTGTCTTACAACAATTTATCGGGAAGGATTCCTCGGGGACATCAACTGGACACACTCA ATGCAGATGATCCATCTTTGATGTACATCGGCAACCCAGGTCTTTGTGGTTATCCCCTTG CAAAGAATTGTCCTGAAAATGGGACATCTCAAGGTCAAACCGTTAAAAGTCATCACGATG GTTCGTTCTGTGCTGGTCTCAGTGTGGGGTTTGTGATTGGAGTTTGGATGGTTCTTGCGT CACTTTTGTTCAAGAAGAGTTGGAGGTTTTCTTACTTTCACCACTTTGATAGGCAGTATG ACAGATTGAATGTGTTTCTTACTGTCACTTCAGCGATATACCTCCAAAAGGCTACACGAT TTAAGGATGGAAGAAGCTGAGTGGATTCCTACATATAAGGGCTTTCTACCTGAGAAAATT TTCTCGTACTTGAGAAGGTACCGAGAGCTACTATATTTTCTAGACTAAAAAATGTGGAAC TTCTCGATATCTTCTCAAGGATCATCTAATCAATCGGAAGTTGAAAAATAATCCTACATT ACATCTTTGTAATATTAGCCCATGTGTGGCTCTCTATGTTGCCTTCTTGTCTTGTTTTCA AGCACTCGTATTAGAAAATAATAATCTCGCAGCATATCGTGC