Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os01t0603000-01
CDS Infomation	cds chromosome:IRGSP-1.0:1:23740879:23744974:-1 gene:Os01g0603000 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Nuclear RNA binding protein A. (Os01t0603000-01)
Sequence	ATGGGGACGAAGAACCAGTTCGACCTGCTCGTCGACGTCGACAACGACGACCCCTCGCAC CTCATCGCCGCCGCCGAGAAGAAGGCGGCGGCGGCGGCCGCGTCGCCCAAGCCGGCCGCC CAGGCAAAGCTGCCCACCAAGCCGCCGCCGCCCGCGCAGGCTGTAAAGGAGTCCAGGAAC TATGGTGCTCCAGCCCGTGAGGGGGCAGGCCGCAATGGACCAGGGCGTGGCAGTGGTGGT TTTGGTGGAGGCAGGATAGGCCAAAGGCGTGATTTTGGTGAGGGTGATACCAACGGTGTA GAGGGAGGGTATGGCGCTAGCGGCTTTGGGGATGGAATTGTGAGGAGGGAAGAAGGTGAA CACAGACCTTCAGAGAGGGGCCATGGACCACGCCAGCCTTACCGTGGCGGAGGCCGACGT GGCGGTTACACTGGTGGGGAGGCTGGGGATGAGTCTGGTCGTGCTCCTCACCGTGCCTAT GAACGTCGTAGTGGCACAGGTCGAGGGTATGGGATGAAACGTGAAGGCGCAGGCCGTGGT AACTGGGGAACTGTGACTGATGAAGCCCTTGCCCAGGAATCTGGTGAGGCTGTCAGTATT GAAGTGTCTGTTACCGTGACTGAGGAAAACAAGCAGGAAGATGTACCACAATCTGATGAA GTCGAGAAACACAAGGAGGGTGAATCAAATGAAGAGGAAGAAAAGGAACCTGAAGACAAG GAGATGACTTTGGAGGAATATGAGAAAGTACTGGAGGAGAAGAGGAAAGCTTTGCTTTCA CTGAAGGTTGAAGAGAGAAAGGTTGTGGTGGACAAGGAATTGCAGTCAATGCAACAGCTC TCAGTGAAGAAGGATTCTGATGAAGTGTTCATCAAGCTGGGTTCTGACAAGGACAAAAAG AAAGAAAATGTTGAAAGAGATGAACGCACCAGGAAGTCTCTTAGCATCAATGAATTCCTG AAGCCGGCTGAAGGTGAAAGATACTACAGCCCAGGTGGGCGGGGGCGGGGACGTGGCAGA GGACGTGGTGACCGTGGAGGATTCCGGGATGGCTATAGCTCTCGAGGTCCTGTTGCCGCA CCAAGAATTGAAGATCAAGCGCAGTTTCCCGGCTTGGCTGGGAGATTGGTGCACTAG

Peptide Sequence

PEP ID	Os01t0603000-01
PEP Infomation	pep chromosome:IRGSP-1.0:1:23740879:23744974:-1 gene:Os01g0603000 transcript:Os01t0603000-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Nuclear RNA binding protein A. (Os01t0603000-01)
Sequence	MGTKNQFDLLVDVDNDDPSHLIAAAEKKAAAAAASPKPAAQAKLPTKPPPPAQAVKESRN YGAPAREGAGRNGPGRGSGGFGGGRIGQRRDFGEGDTNGVEGGYGASGFGDGIVRREEGE HRPSERGHGPRQPYRGGGRRGGYTGGEAGDESGRAPHRAYERRSGTGRGYGMKREGAGRG NWGTVTDEALAQESGEAVSIEVSVTVTEENKQEDVPQSDEVEKHKEGESNEEEEKEPEDK EMTLEEYEKVLEEKRKALLSLKVEERKVVVDKELQSMQQLSVKKDSDEVFIKLGSDKDKK KENVERDERTRKSLSINEFLKPAEGERYYSPGGRGRGRGRGRGDRGGFRDGYSSRGPVAA PRIEDQAQFPGLAGRLVH

Transcript Sequence

Transcript ID	Os01t0603000-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:1:23740879:23744974:-1 gene:Os01g0603000 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Nuclear RNA binding protein A. (Os01t0603000-01)
Sequence	GAGGGGGTGAGCTCCAGGTGGCGGCTAGGGTTAGGGTTTTAGGGTGAACTCACCGCGCCA CCACCCCTCCCGCATCTTCCACCTCCGCCTCTAAACCCCGCACGCCCGCAACCCATCGTG CCTGATTCGTCCATCCGCCATTGATGGCGGTCTTGTCACCGGCGGCGTTGTCCTAAGTGG TTTGGGTGTTGTGCAAGAGGGTGGTTTCGTTGCGGGGGGAGGAGGATCCGATGGGGACGA AGAACCAGTTCGACCTGCTCGTCGACGTCGACAACGACGACCCCTCGCACCTCATCGCCG CCGCCGAGAAGAAGGCGGCGGCGGCGGCCGCGTCGCCCAAGCCGGCCGCCCAGGCAAAGC TGCCCACCAAGCCGCCGCCGCCCGCGCAGGCTGTAAAGGAGTCCAGGAACTATGGTGCTC CAGCCCGTGAGGGGGCAGGCCGCAATGGACCAGGGCGTGGCAGTGGTGGTTTTGGTGGAG GCAGGATAGGCCAAAGGCGTGATTTTGGTGAGGGTGATACCAACGGTGTAGAGGGAGGGT ATGGCGCTAGCGGCTTTGGGGATGGAATTGTGAGGAGGGAAGAAGGTGAACACAGACCTT CAGAGAGGGGCCATGGACCACGCCAGCCTTACCGTGGCGGAGGCCGACGTGGCGGTTACA CTGGTGGGGAGGCTGGGGATGAGTCTGGTCGTGCTCCTCACCGTGCCTATGAACGTCGTA GTGGCACAGGTCGAGGGTATGGGATGAAACGTGAAGGCGCAGGCCGTGGTAACTGGGGAA CTGTGACTGATGAAGCCCTTGCCCAGGAATCTGGTGAGGCTGTCAGTATTGAAGTGTCTG TTACCGTGACTGAGGAAAACAAGCAGGAAGATGTACCACAATCTGATGAAGTCGAGAAAC ACAAGGAGGGTGAATCAAATGAAGAGGAAGAAAAGGAACCTGAAGACAAGGAGATGACTT TGGAGGAATATGAGAAAGTACTGGAGGAGAAGAGGAAAGCTTTGCTTTCACTGAAGGTTG AAGAGAGAAAGGTTGTGGTGGACAAGGAATTGCAGTCAATGCAACAGCTCTCAGTGAAGA AGGATTCTGATGAAGTGTTCATCAAGCTGGGTTCTGACAAGGACAAAAAGAAAGAAAATG TTGAAAGAGATGAACGCACCAGGAAGTCTCTTAGCATCAATGAATTCCTGAAGCCGGCTG AAGGTGAAAGATACTACAGCCCAGGTGGGCGGGGGCGGGGACGTGGCAGAGGACGTGGTG ACCGTGGAGGATTCCGGGATGGCTATAGCTCTCGAGGTCCTGTTGCCGCACCAAGAATTG AAGATCAAGCGCAGTTTCCCGGCTTGGCTGGGAGATTGGTGCACTAGCTGCCATGATATG ATCTCCTTGCACTTTTTGTGGGATTTTAAAAATGTGTCTGCACGCGTTGCTTGCTGCATC AGTGTTGTACTGTCAAGCTACGCATATGCCACTGTTGTGTCTCATGTATACCCGTGCGGC CGAGCCAAATGTTTGAAAGGTAATTTTCAAAAAATCTCATTGGAGGTTTTCCGTG