Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os01t0601675-01
CDS Infomation	cds chromosome:IRGSP-1.0:1:23639654:23642878:-1 gene:Os01g0601675 gene_biotype:protein_coding transcript_biotype:protein_coding description:Leucine-rich repeat, N-terminal domain containing protein. (Os01t0601675-01)
Sequence	ATGGACGTGTTTAGATGCATCCACGTTCTAATAGCCTTAGCCTTGCTTTTGTTCACCCCA ATCATCTCCAATGAGGCCTCAGCCAATGCCAATAGCACAGGTGGTTGTATTCCAAGTGAG AGATCTGCACTTATCAGCTTCAAATCAGGATTATTAGACCCTGGAAACCTCCTTTCGTCA TGGGAGGGTGACGATTGTTGTCAATGGAATGGCGTGTGGTGCAACAACGAGACCGGGCAT ATTGTTGAGCTAAATCTCCCAGGAGGTAGCTGCAACATCTTGCCCCCATGGGTTCCGCTG GAACCAGGACTCGGAGGCAGCATAGGCCCCTCGTTGCTTGGCTTAAAGCAACTGGAGCAT CTCGACCTCAGCTGCAACAATTTCAGTGGGACGCTACCGGAGTTCTTGGGTTCTCTCCAC AACCTGAGATCTCTCGACCTATCCTGGTCGACATTCGTTGGGACAGTGCCACCGCAGCTG GGTAATCTCTCCAACTTGCGCTACTTCAGTCTTGGTTCTAATGATAATTCTAGCTTATAT TCAACGGATGTATCCTGGTTGTCACGGTTATCTTCTCTCGAGCATCTAGACATGAGCCTT GTGAATCTCAGTGCGGTTGTGGACTGGGTTTCGGTGGTGAACAAGCTTCCATCTCTTAGA TTTCTCCGTTTGTTTGGATGCCAGCTTAGCAGCACGGTCGATTCTGTTCCGAACAACAAC CTAACATCTCTTGAAACTCTGGACCTTTCACTTAATAATTTCAACAAGAGGATTGCACCC AATTGGTTTTGGGATTTAACTAGTCTTAAACTTCTAGATATCTCAGATAGCGGTTTCTAT GGACCATTTCCAAACGAGATAGGCAATATGACCTCTATTGTGGATATTGATTTATCAGGC AATAATCTTGTGGGAATGATACCATTTAACCTGAAGAACCTATGTAACTTGGAGAAATTT AATGTTGCTGGAACCAACATCAATGGGAATATAACGGAAATATTCAATAGATTGCCTAGA TGCTCATGGAATAAGTTACAAGTGTTGTTTCTACCGGACTGCAACTTGACTGGAAGCCTA CCAACAACACTAGAACCCTTGAGCAATTTGAGCATGCTTGAGCTTGGTAATAACAATATC ACAGGTCCCATCCCACTTTGGATAGGAGAGCTCAGTAATCTAACAATGTTGGGCCTCAGC TCCAACAATCTAGATGGGGTCATACATGAAGGCCATTTATCAGGCCTAGAAAGTCTAGAT TTGTTGATCTTGTCTGATAATAACCACATAGCCATCAAGGTGAATTCTACCTGGGTTCCT CCTTTCAAGCAAATAACAGATATTGAACTTCGGTCCTGTCAGTTAGGGCCTAAATTCCCA ACATGGCTCAGGTATCTAACAGATGTATACAATCTTGATATCTCAAACACAAGCATATCA GACAAGGTTCCTGACTGGTTTTGGAAAGCAGCGTCATCAGTAACACATTTAAATATGAGA AACAATCAGATTGCAGGTGCCCTTCCATCTACATTGGAATACATGAGAACGATCGTAATG GATCTCAGTTCTAATAAGTTTAGTGGTCCAATACCCAAGCTTCCTGTCAGTCTAACCAGC TTAGACTTCTCAAAGAACAATTTATCCGGGCCTCTACCATCAGACATAGGAGCGTCAGCT CTAGTATCACTTGTTCTGTATGGCAACTCCCTTTCTGGTTCAATTCCATCTTATTTGTGC AAGATGCAGTCTCTGGAACTGTTGGATATATCAAGAAACAAGATAACTGGGCCAATTTCT GATTGTGCAATCGATTCAAGCTCAGCAAACTACACATGTACGAATATTATCAATATAAGC TTAAGAAAAAATAACCTCTCAGGACAATTTCCTTCGTTCTTTAAGAACTGCAAAAACCTT GTTTTTCTGGATCTTGCTGAAAATCAATTCTCTGGGACACTGCCTGCATGGATTGGGGAA AAATTACCTTCTTTGGTATTCTTACGGCTGCGTTCTAATAGCTTTAGTGGTCATATTCCA ATTGAACTTACCAGTCTGGCGGGTCTTCAATATTTAGACCTTGCACATAACAACTTTTCA GGATGCATACCGAATTCTTTGGCGAAATTTCATAGGATGACACTCGAACAAGATAAAGAA GACAGATTTTCAGGGGCTATTAGACATGGAATTGGGATCAATGATAATGACATGGTTAAT TATATTGAGAACATATCTGTAGTCACAAAAGGTCAAGAACGCCTATATACAGGTGAAATC GTATACATGGTGAACATTGATTTATCTAGTAACAATCTTACTGGAGAGATTCCTGAAGAG ATTATCAGTCTTGTTGCGTTGACAAACCTGAACTTATCATGGAATAGCTTAAGTGGACAA ATTCCTGAGAAGATTGGTTCCTTGTCACAATTGGAGTCCCTTGATTTGTCACACAATGTG CTTTCTGGTGGGATTCCCAGCAGTATAGCATCTCTTACCTACTTGAGCCACATGAATTTG TCGTACAACAATCTTTCTGGAAGAATTCCAGCAGGAAATCAACTCGACATTCTTGAAGAC CCTGCATCTATGTATGTTGGAAACATCGATCTCTGTGGGCATCCTCTACCAAATAACTGC TCTATCAATGGTGATACTAAAATTGAACGAGATGACTTGGTCAACATGTCATTTCACTTC AGCATGATCATCGGTTTCATGGTTGGCCTCTTGCTAGTATTCTATTTTATGCTCTTCAGC AGAAGATGGAGAAATACTTGCTTTGTGTTTGTCGATGGCTTGTATGACAGAACGTATGTT CAAGTGGCCGTAACCTGCAGGAGGTTATGGAGGAGAAACTGA

Peptide Sequence

PEP ID	Os01t0601675-01
PEP Infomation	pep chromosome:IRGSP-1.0:1:23639654:23642878:-1 gene:Os01g0601675 transcript:Os01t0601675-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Leucine-rich repeat, N-terminal domain containing protein. (Os01t0601675-01)
Sequence	MDVFRCIHVLIALALLLFTPIISNEASANANSTGGCIPSERSALISFKSGLLDPGNLLSS WEGDDCCQWNGVWCNNETGHIVELNLPGGSCNILPPWVPLEPGLGGSIGPSLLGLKQLEH LDLSCNNFSGTLPEFLGSLHNLRSLDLSWSTFVGTVPPQLGNLSNLRYFSLGSNDNSSLY STDVSWLSRLSSLEHLDMSLVNLSAVVDWVSVVNKLPSLRFLRLFGCQLSSTVDSVPNNN LTSLETLDLSLNNFNKRIAPNWFWDLTSLKLLDISDSGFYGPFPNEIGNMTSIVDIDLSG NNLVGMIPFNLKNLCNLEKFNVAGTNINGNITEIFNRLPRCSWNKLQVLFLPDCNLTGSL PTTLEPLSNLSMLELGNNNITGPIPLWIGELSNLTMLGLSSNNLDGVIHEGHLSGLESLD LLILSDNNHIAIKVNSTWVPPFKQITDIELRSCQLGPKFPTWLRYLTDVYNLDISNTSIS DKVPDWFWKAASSVTHLNMRNNQIAGALPSTLEYMRTIVMDLSSNKFSGPIPKLPVSLTS LDFSKNNLSGPLPSDIGASALVSLVLYGNSLSGSIPSYLCKMQSLELLDISRNKITGPIS DCAIDSSSANYTCTNIINISLRKNNLSGQFPSFFKNCKNLVFLDLAENQFSGTLPAWIGE KLPSLVFLRLRSNSFSGHIPIELTSLAGLQYLDLAHNNFSGCIPNSLAKFHRMTLEQDKE DRFSGAIRHGIGINDNDMVNYIENISVVTKGQERLYTGEIVYMVNIDLSSNNLTGEIPEE IISLVALTNLNLSWNSLSGQIPEKIGSLSQLESLDLSHNVLSGGIPSSIASLTYLSHMNL SYNNLSGRIPAGNQLDILEDPASMYVGNIDLCGHPLPNNCSINGDTKIERDDLVNMSFHF SMIIGFMVGLLLVFYFMLFSRRWRNTCFVFVDGLYDRTYVQVAVTCRRLWRRN

Transcript Sequence

Transcript ID	Os01t0601675-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:1:23639654:23642878:-1 gene:Os01g0601675 gene_biotype:protein_coding transcript_biotype:protein_coding description:Leucine-rich repeat, N-terminal domain containing protein. (Os01t0601675-01)
Sequence	ATTAGATCGAGTTGCATTGCAAAAACAATACATGGACGTGTTTAGATGCATCCACGTTCT AATAGCCTTAGCCTTGCTTTTGTTCACCCCAATCATCTCCAATGAGGCCTCAGCCAATGC CAATAGCACAGGTGGTTGTATTCCAAGTGAGAGATCTGCACTTATCAGCTTCAAATCAGG ATTATTAGACCCTGGAAACCTCCTTTCGTCATGGGAGGGTGACGATTGTTGTCAATGGAA TGGCGTGTGGTGCAACAACGAGACCGGGCATATTGTTGAGCTAAATCTCCCAGGAGGTAG CTGCAACATCTTGCCCCCATGGGTTCCGCTGGAACCAGGACTCGGAGGCAGCATAGGCCC CTCGTTGCTTGGCTTAAAGCAACTGGAGCATCTCGACCTCAGCTGCAACAATTTCAGTGG GACGCTACCGGAGTTCTTGGGTTCTCTCCACAACCTGAGATCTCTCGACCTATCCTGGTC GACATTCGTTGGGACAGTGCCACCGCAGCTGGGTAATCTCTCCAACTTGCGCTACTTCAG TCTTGGTTCTAATGATAATTCTAGCTTATATTCAACGGATGTATCCTGGTTGTCACGGTT ATCTTCTCTCGAGCATCTAGACATGAGCCTTGTGAATCTCAGTGCGGTTGTGGACTGGGT TTCGGTGGTGAACAAGCTTCCATCTCTTAGATTTCTCCGTTTGTTTGGATGCCAGCTTAG CAGCACGGTCGATTCTGTTCCGAACAACAACCTAACATCTCTTGAAACTCTGGACCTTTC ACTTAATAATTTCAACAAGAGGATTGCACCCAATTGGTTTTGGGATTTAACTAGTCTTAA ACTTCTAGATATCTCAGATAGCGGTTTCTATGGACCATTTCCAAACGAGATAGGCAATAT GACCTCTATTGTGGATATTGATTTATCAGGCAATAATCTTGTGGGAATGATACCATTTAA CCTGAAGAACCTATGTAACTTGGAGAAATTTAATGTTGCTGGAACCAACATCAATGGGAA TATAACGGAAATATTCAATAGATTGCCTAGATGCTCATGGAATAAGTTACAAGTGTTGTT TCTACCGGACTGCAACTTGACTGGAAGCCTACCAACAACACTAGAACCCTTGAGCAATTT GAGCATGCTTGAGCTTGGTAATAACAATATCACAGGTCCCATCCCACTTTGGATAGGAGA GCTCAGTAATCTAACAATGTTGGGCCTCAGCTCCAACAATCTAGATGGGGTCATACATGA AGGCCATTTATCAGGCCTAGAAAGTCTAGATTTGTTGATCTTGTCTGATAATAACCACAT AGCCATCAAGGTGAATTCTACCTGGGTTCCTCCTTTCAAGCAAATAACAGATATTGAACT TCGGTCCTGTCAGTTAGGGCCTAAATTCCCAACATGGCTCAGGTATCTAACAGATGTATA CAATCTTGATATCTCAAACACAAGCATATCAGACAAGGTTCCTGACTGGTTTTGGAAAGC AGCGTCATCAGTAACACATTTAAATATGAGAAACAATCAGATTGCAGGTGCCCTTCCATC TACATTGGAATACATGAGAACGATCGTAATGGATCTCAGTTCTAATAAGTTTAGTGGTCC AATACCCAAGCTTCCTGTCAGTCTAACCAGCTTAGACTTCTCAAAGAACAATTTATCCGG GCCTCTACCATCAGACATAGGAGCGTCAGCTCTAGTATCACTTGTTCTGTATGGCAACTC CCTTTCTGGTTCAATTCCATCTTATTTGTGCAAGATGCAGTCTCTGGAACTGTTGGATAT ATCAAGAAACAAGATAACTGGGCCAATTTCTGATTGTGCAATCGATTCAAGCTCAGCAAA CTACACATGTACGAATATTATCAATATAAGCTTAAGAAAAAATAACCTCTCAGGACAATT TCCTTCGTTCTTTAAGAACTGCAAAAACCTTGTTTTTCTGGATCTTGCTGAAAATCAATT CTCTGGGACACTGCCTGCATGGATTGGGGAAAAATTACCTTCTTTGGTATTCTTACGGCT GCGTTCTAATAGCTTTAGTGGTCATATTCCAATTGAACTTACCAGTCTGGCGGGTCTTCA ATATTTAGACCTTGCACATAACAACTTTTCAGGATGCATACCGAATTCTTTGGCGAAATT TCATAGGATGACACTCGAACAAGATAAAGAAGACAGATTTTCAGGGGCTATTAGACATGG AATTGGGATCAATGATAATGACATGGTTAATTATATTGAGAACATATCTGTAGTCACAAA AGGTCAAGAACGCCTATATACAGGTGAAATCGTATACATGGTGAACATTGATTTATCTAG TAACAATCTTACTGGAGAGATTCCTGAAGAGATTATCAGTCTTGTTGCGTTGACAAACCT GAACTTATCATGGAATAGCTTAAGTGGACAAATTCCTGAGAAGATTGGTTCCTTGTCACA ATTGGAGTCCCTTGATTTGTCACACAATGTGCTTTCTGGTGGGATTCCCAGCAGTATAGC ATCTCTTACCTACTTGAGCCACATGAATTTGTCGTACAACAATCTTTCTGGAAGAATTCC AGCAGGAAATCAACTCGACATTCTTGAAGACCCTGCATCTATGTATGTTGGAAACATCGA TCTCTGTGGGCATCCTCTACCAAATAACTGCTCTATCAATGGTGATACTAAAATTGAACG AGATGACTTGGTCAACATGTCATTTCACTTCAGCATGATCATCGGTTTCATGGTTGGCCT CTTGCTAGTATTCTATTTTATGCTCTTCAGCAGAAGATGGAGAAATACTTGCTTTGTGTT TGTCGATGGCTTGTATGACAGAACGTATGTTCAAGTGGCCGTAACCTGCAGGAGGTTATG GAGGAGAAACTGAGGACAAATGGTATGTCTTGGTAAAAAATAATTAGAAAAATAGTCATG CATAGAACGGGTAGATGTGAAAAATTGAAACGTAGTTTCTATAGCAAATGCTGGCTATAT AAAAAAATTCCCAAGCTTTTTTTCTCATCCACCACTGGGCATGGGGAAAAAATGTTTGTA TTTTCCTGGAGATTTAATTCTTGAACATAGTACATGCTTTTAGTGGTAAAGCACGTACCC GCACTACATGATGTTATGTCTCTACTATCTCATTTGAATGTGTAAAGGATACATATCTAA TTGGGCACGTGCCTGCACTACATGATGTTATGTCTCTACAATCTC