Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os01t0601000-00
CDS Infomation

cds chromosome:IRGSP-1.0:1:23611048:23615257:-1 gene:Os01g0601000 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:endosperm-specific gene 10 description:Mg2+ transporter protein, CorA-like/Zinc transport protein ZntB domain containing protein. (Os01t0601000-00)
Sequence

ATGGTGAACGGCGAGCCTCTCTGGCACGGCGTCCGCCATGGCGGCGGCGGCGGCGACGCT
AGGAAGCAGCACCACCACCACCACCAGCTCAGTCACGGCTTCGGCGCCAAGGATGCCTCT
GCGTCCTCGCCGTGGTCGTCGTCCGACGGCCTGTGGACCGACGGCCTCGTCTGCGCCTTC
GAGTTCGTGCGCGGCGGCGGCGGCGCCCATGGCTTCGTTACCCCGGCCAACTTGTGCCGG
AGCAAGTGCTGCTCCTTGCTGCAGTCCAAGGACCTCGCCGTCCAGGACCGCAGGAGATCA
CTCGCGGCCAAGATCGGAGACAACGGCGACGAACCGAGGCCGCCGACAGTGGCGCCGGCG
GAGAGCTTGTGGGCGCCGATCGGGTGGAGGAGGATCACGCAGCTGGTGGGGATGGTGGGA
GGGGACGCCGCGGCGTGGCACGACGACGGGCAGAGCATGAGCCTCATGGAGCACGACGGC
GGCGGCGACGAGCAGTGCGACGACATCACCGTCGCCGACGTCGCCGCGCCGTACTGGCAG
AGGGCGGCGGGGCCCACCTGGTGGTGCCACGTGGCGGCGGGGCACCCGGCGGTGGACGCG
TGGCTGGCCGCCGCGCGGTGGCTCCACCCGGCGATCTGCGTGGCGCTCAGGGACGAGAGC
GTGCTCATCAGTGAGAAGATGAAGCATCTGCTCTACGAGGTCCCTGTAAGAGTTGCAGGA
GGCTTGCTATTTGAACTGTTGGGGCAGTCGGTTGGTGATCCAGCTCGTGACGAAGAAGAC
ATTCCAATTGTGCTCCGTGCTTGGCAAGCTCAAAATTTTCTGATAACTGCACTTCACGTG
AAGGGATCTGCACCAAACGTTAACGTCATTGGAGTTACTGAAGTTCAGGTGGAGCTTCTT
TCTGCCTGTGGAAGTACAGGTACAGCTCCTAAAAATATTCAGGAAGTTATAGCACATTTG
GCTTCACGGCTTGCCCGATGGGATGACAGATTGTGGCGTAAATATGTCTTCGGTGCCGCT
GATGAAATAGAACTTAAATTTGTAAACAGGCGAAAGCAAGAAGATTTGAAACTGTTGTGC
ATGATATTTAACCAAGACATTAGAAGATTGGCCACTCAGGTTATCAGAGTGAAATGGTCA
CTGCATGCTAGGGAGGAGATAATTTTTGAGCTGCTGAAGTATCTAGGAGGCAGCACCACA
AAATCATTACTTGAAGCGATAAAGAAAGACGCAAGACAAATGATTGAAGAGCAGGAGGCA
GTTCGTGGCCGGCTCTTCACCATCCAAGATGTGATGCAGAGCACCCTCCGTGCTTGGTCA
CAGAAGAGCCTTCGCATTACGCATAACCTGACAATTTTCGGTGGGTGTGGCTTGGTTCTG
TCCATCATCGCCGGATTGTTCGGAATCAATGTTGATGGGATACCAGGAGCTGAGAACACT
CCCTACGCTTTCGCGCTATTCTCCGCGCTGCTTTTCTTGGTAGGACTCCTGCTGATCATC
GTGGGGATAGTCTATTTCGGACTGCAGAAGCCGATCAGCGATGAGCAGGTCCAGGTGAGG
AAGTTAGAGCTCCAGGAACTGGTCTCGATGTTCCAGCACGAAGCCGAGACACACGCCAGG
GTGAAAGAAGGGGTCTTGAGGACTGACTTGCCTCCCAGAGCTGCCGATCTCATATGTGAT
GATAATGGTGATTCACGTCTCCTTGTTTGTGACTGTTGA

Peptide Sequence

PEP ID

Os01t0601000-00
PEP Infomation

pep chromosome:IRGSP-1.0:1:23611048:23615257:-1 gene:Os01g0601000 transcript:Os01t0601000-00 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:endosperm-specific gene 10 description:Mg2+ transporter protein, CorA-like/Zinc transport protein ZntB domain containing protein. (Os01t0601000-00)
Sequence

MVNGEPLWHGVRHGGGGGDARKQHHHHHQLSHGFGAKDASASSPWSSSDGLWTDGLVCAF
EFVRGGGGAHGFVTPANLCRSKCCSLLQSKDLAVQDRRRSLAAKIGDNGDEPRPPTVAPA
ESLWAPIGWRRITQLVGMVGGDAAAWHDDGQSMSLMEHDGGGDEQCDDITVADVAAPYWQ
RAAGPTWWCHVAAGHPAVDAWLAAARWLHPAICVALRDESVLISEKMKHLLYEVPVRVAG
GLLFELLGQSVGDPARDEEDIPIVLRAWQAQNFLITALHVKGSAPNVNVIGVTEVQVELL
SACGSTGTAPKNIQEVIAHLASRLARWDDRLWRKYVFGAADEIELKFVNRRKQEDLKLLC
MIFNQDIRRLATQVIRVKWSLHAREEIIFELLKYLGGSTTKSLLEAIKKDARQMIEEQEA
VRGRLFTIQDVMQSTLRAWSQKSLRITHNLTIFGGCGLVLSIIAGLFGINVDGIPGAENT
PYAFALFSALLFLVGLLLIIVGIVYFGLQKPISDEQVQVRKLELQELVSMFQHEAETHAR
VKEGVLRTDLPPRAADLICDDNGDSRLLVCDC

Transcript Sequence

Transcript ID

Os01t0601000-00
Transcript Infomation

cdna chromosome:IRGSP-1.0:1:23611048:23615257:-1 gene:Os01g0601000 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:endosperm-specific gene 10 description:Mg2+ transporter protein, CorA-like/Zinc transport protein ZntB domain containing protein. (Os01t0601000-00)
Sequence

ATGGTGAACGGCGAGCCTCTCTGGCACGGCGTCCGCCATGGCGGCGGCGGCGGCGACGCT
AGGAAGCAGCACCACCACCACCACCAGCTCAGTCACGGCTTCGGCGCCAAGGATGCCTCT
GCGTCCTCGCCGTGGTCGTCGTCCGACGGCCTGTGGACCGACGGCCTCGTCTGCGCCTTC
GAGTTCGTGCGCGGCGGCGGCGGCGCCCATGGCTTCGTTACCCCGGCCAACTTGTGCCGG
AGCAAGTGCTGCTCCTTGCTGCAGTCCAAGGACCTCGCCGTCCAGGACCGCAGGAGATCA
CTCGCGGCCAAGATCGGAGACAACGGCGACGAACCGAGGCCGCCGACAGTGGCGCCGGCG
GAGAGCTTGTGGGCGCCGATCGGGTGGAGGAGGATCACGCAGCTGGTGGGGATGGTGGGA
GGGGACGCCGCGGCGTGGCACGACGACGGGCAGAGCATGAGCCTCATGGAGCACGACGGC
GGCGGCGACGAGCAGTGCGACGACATCACCGTCGCCGACGTCGCCGCGCCGTACTGGCAG
AGGGCGGCGGGGCCCACCTGGTGGTGCCACGTGGCGGCGGGGCACCCGGCGGTGGACGCG
TGGCTGGCCGCCGCGCGGTGGCTCCACCCGGCGATCTGCGTGGCGCTCAGGGACGAGAGC
GTGCTCATCAGTGAGAAGATGAAGCATCTGCTCTACGAGGTCCCTGTAAGAGTTGCAGGA
GGCTTGCTATTTGAACTGTTGGGGCAGTCGGTTGGTGATCCAGCTCGTGACGAAGAAGAC
ATTCCAATTGTGCTCCGTGCTTGGCAAGCTCAAAATTTTCTGATAACTGCACTTCACGTG
AAGGGATCTGCACCAAACGTTAACGTCATTGGAGTTACTGAAGTTCAGGTGGAGCTTCTT
TCTGCCTGTGGAAGTACAGGTACAGCTCCTAAAAATATTCAGGAAGTTATAGCACATTTG
GCTTCACGGCTTGCCCGATGGGATGACAGATTGTGGCGTAAATATGTCTTCGGTGCCGCT
GATGAAATAGAACTTAAATTTGTAAACAGGCGAAAGCAAGAAGATTTGAAACTGTTGTGC
ATGATATTTAACCAAGACATTAGAAGATTGGCCACTCAGGTTATCAGAGTGAAATGGTCA
CTGCATGCTAGGGAGGAGATAATTTTTGAGCTGCTGAAGTATCTAGGAGGCAGCACCACA
AAATCATTACTTGAAGCGATAAAGAAAGACGCAAGACAAATGATTGAAGAGCAGGAGGCA
GTTCGTGGCCGGCTCTTCACCATCCAAGATGTGATGCAGAGCACCCTCCGTGCTTGGTCA
CAGAAGAGCCTTCGCATTACGCATAACCTGACAATTTTCGGTGGGTGTGGCTTGGTTCTG
TCCATCATCGCCGGATTGTTCGGAATCAATGTTGATGGGATACCAGGAGCTGAGAACACT
CCCTACGCTTTCGCGCTATTCTCCGCGCTGCTTTTCTTGGTAGGACTCCTGCTGATCATC
GTGGGGATAGTCTATTTCGGACTGCAGAAGCCGATCAGCGATGAGCAGGTCCAGGTGAGG
AAGTTAGAGCTCCAGGAACTGGTCTCGATGTTCCAGCACGAAGCCGAGACACACGCCAGG
GTGAAAGAAGGGGTCTTGAGGACTGACTTGCCTCCCAGAGCTGCCGATCTCATATGTGAT
GATAATGGTGATTCACGTCTCCTTGTTTGTGACTGTTGAAGTTGAAATAG