Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
(lang=JA only) Sequences Other Tools

Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os01t0598600-03
CDS Infomation

cds chromosome:IRGSP-1.0:1:23515624:23516765:1 gene:Os01g0598600 gene_biotype:protein_coding transcript_biotype:protein_coding description:Peptidase A1 domain containing protein. (Os01t0598600-01);Similar to predicted protein. (Os01t0598600-03)
Sequence

TACGGCGCCGTCGACTGCGCCGCGCCGCTCTGCCGCAGGCTCGACTCCGGCGGCTGCGAC
CTGCGCCGCAAGGCCTGCCTCTACCAGGTCGCCTACGGCGACGGCTCCGTCACCGCCGGG
GACTTCGCCACGGAGACCCTCACCTTCGCCAGCGGGGCCCGCGTGCCGCGCGTCGCCCTC
GGCTGCGGCCACGACAACGAGGGTCTCTTCGTCGCGGCGGCGGGGCTCCTCGGGCTCGGC
CGCGGCAGCCTCTCCTTCCCCTCCCAGATCTCCCGCCGCTTCGGGCGGAGCTTCTCGTAC
TGCCTCGTGGACCGCACCTCCTCGTCGGCCAGCGCCACCTCCCGGTCCTCCACCGTCACG
TTCGGCTCCGGCGCCGTGGGGCCCTCGGCCGCCGCGTCCTTCACCCCGATGGTGAAGAAC
CCCAGGATGGAGACGTTCTACTACGTGCAGCTCATGGGCATCAGCGTCGGCGGCGCGCGC
GTCCCGGGCGTGGCCGTGTCCGACCTCCGCCTGGACCCGTCCACAGGCCGCGGCGGCGTC
ATCGTGGACTCCGGCACGTCCGTCACCCGCCTGGCCCGGCCGGCGTACGCCGCCCTGCGC
GACGCGTTCCGCGCGGCGGCCGCGGGCCTCCGCCTCTCCCCGGGCGGGTTCTCCCTGTTC
GACACGTGCTACGACCTGAGCGGGCTCAAGGTGGTGAAGGTGCCCACCGTGTCGATGCAC
TTCGCCGGCGGCGCCGAGGCCGCGCTGCCGCCGGAGAACTACCTGATCCCGGTGGACTCG
AGGGGCACCTTCTGCTTCGCGTTCGCCGGCACCGACGGCGGCGTCTCCATCATCGGGAAC
ATCCAGCAGCAGGGCTTCCGCGTGGTGTTCGACGGCGACGGCCAGCGCCTCGGCTTCGTG
CCCAAGGGATGCTAG

Peptide Sequence

PEP ID

Os01t0598600-03
PEP Infomation

pep chromosome:IRGSP-1.0:1:23515624:23516765:1 gene:Os01g0598600 transcript:Os01t0598600-03 gene_biotype:protein_coding transcript_biotype:protein_coding description:Peptidase A1 domain containing protein. (Os01t0598600-01);Similar to predicted protein. (Os01t0598600-03)
Sequence

YGAVDCAAPLCRRLDSGGCDLRRKACLYQVAYGDGSVTAGDFATETLTFASGARVPRVAL
GCGHDNEGLFVAAAGLLGLGRGSLSFPSQISRRFGRSFSYCLVDRTSSSASATSRSSTVT
FGSGAVGPSAAASFTPMVKNPRMETFYYVQLMGISVGGARVPGVAVSDLRLDPSTGRGGV
IVDSGTSVTRLARPAYAALRDAFRAAAAGLRLSPGGFSLFDTCYDLSGLKVVKVPTVSMH
FAGGAEAALPPENYLIPVDSRGTFCFAFAGTDGGVSIIGNIQQQGFRVVFDGDGQRLGFV
PKGC

Transcript Sequence

Transcript ID

Os01t0598600-03
Transcript Infomation

cdna chromosome:IRGSP-1.0:1:23515624:23516765:1 gene:Os01g0598600 gene_biotype:protein_coding transcript_biotype:protein_coding description:Peptidase A1 domain containing protein. (Os01t0598600-01);Similar to predicted protein. (Os01t0598600-03)
Sequence

GTACGGCGCCGTCGACTGCGCCGCGCCGCTCTGCCGCAGGCTCGACTCCGGCGGCTGCGA
CCTGCGCCGCAAGGCCTGCCTCTACCAGGTCGCCTACGGCGACGGCTCCGTCACCGCCGG
GGACTTCGCCACGGAGACCCTCACCTTCGCCAGCGGGGCCCGCGTGCCGCGCGTCGCCCT
CGGCTGCGGCCACGACAACGAGGGTCTCTTCGTCGCGGCGGCGGGGCTCCTCGGGCTCGG
CCGCGGCAGCCTCTCCTTCCCCTCCCAGATCTCCCGCCGCTTCGGGCGGAGCTTCTCGTA
CTGCCTCGTGGACCGCACCTCCTCGTCGGCCAGCGCCACCTCCCGGTCCTCCACCGTCAC
GTTCGGCTCCGGCGCCGTGGGGCCCTCGGCCGCCGCGTCCTTCACCCCGATGGTGAAGAA
CCCCAGGATGGAGACGTTCTACTACGTGCAGCTCATGGGCATCAGCGTCGGCGGCGCGCG
CGTCCCGGGCGTGGCCGTGTCCGACCTCCGCCTGGACCCGTCCACAGGCCGCGGCGGCGT
CATCGTGGACTCCGGCACGTCCGTCACCCGCCTGGCCCGGCCGGCGTACGCCGCCCTGCG
CGACGCGTTCCGCGCGGCGGCCGCGGGCCTCCGCCTCTCCCCGGGCGGGTTCTCCCTGTT
CGACACGTGCTACGACCTGAGCGGGCTCAAGGTGGTGAAGGTGCCCACCGTGTCGATGCA
CTTCGCCGGCGGCGCCGAGGCCGCGCTGCCGCCGGAGAACTACCTGATCCCGGTGGACTC
GAGGGGCACCTTCTGCTTCGCGTTCGCCGGCACCGACGGCGGCGTCTCCATCATCGGGAA
CATCCAGCAGCAGGGCTTCCGCGTGGTGTTCGACGGCGACGGCCAGCGCCTCGGCTTCGT
GCCCAAGGGATGCTAGCTAATTGCGCCTTAAGCCTGCTGCTTAATCTAATTAACGGGGGA
GTGAGCCTTGTTTAGTCATAATTAAGTACTTAATTAAGGGTTTGGTTTGATTAAGGTGGC
GAGTGAGTGAGGGAGGGAGAGAGCTTTGGATGCTGTAAAGCGCTGTGTGCTTTGAGGATA
AGGCGGTTGAAGGCTGTAAAACAGTTAAAGTGATGGGTTATAAAAATCTCCTTGACCATG
TC