Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os01t0596100-01
CDS Infomation	cds chromosome:IRGSP-1.0:1:23363801:23365877:1 gene:Os01g0596100 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:F-box protein 25 description:Cyclin-like F-box domain containing protein. (Os01t0596100-01)
Sequence	ATGGATTACCGGGCGCTCATGACGATGGAGAAGGTCCTTGTTCAGATGGAGAAGGACGGC GTGGACTCGCGGATGCTGGACCTCGGCGCCGACTGCATGTGCAAACTCCTCGTGGCATCC CTCCCCGACCCGCCCGTCTACCCCGACGCCGTCCTCTCGGCCAACGACGACGACGACTTG TCCGGCGCCGGCGCCGAGGACCGCATCGGCGCGCTCCCCGACGACCTCCTCGGCGGCGTC GTCTCCCGCCTCCCTATCAAGGACGCCGTGCGCACCGCCGCGCTGTCTTCACGGTGGCGC CGCATCTGGCTCTCCGCGCCGCTCGTCCTCGTCGACGGCCACCTCCTCCCGCCGGGCGAG GAGGCGGGCCAACTCGCGCTCGACGCCAGCGGCGCCGTCGCCGCCGCGGTGTCGCGCGTC CTCGAGGCCCACCCGGGCCCCTTCCGCTACGTCGAGCTCACCTCCACCGCCATGGGGGCT CGCGCTCGCCGCGGCGACCTCGCGCGCTGGCTCCACCTCCTCGCCGTCAAGGGCGTCCGC GAGCTCGTCTTCGTGAACCGCCGCAGGCCCTTGGACGTCGCCCTCCCCGCCACGGTGTTC GCCCTCGCGCCCCTCAGCCGCCTCTACCTCGGCACCTGGAAGTTCCCGGACACCGCCGCC CTCCCGCGCGGCGCCGGCTTCCCCCACCTCCGGGAGCTCGGCCTCTACTGCGTCGCCATG GAGGACCGGGACCTCGACTTCGTCCTCGCCAACAGCCCCGTCCTGGAGTGCCTCGGCATC TACTACAGCCAGAGGCAGATTGTGCTCCTCCGCCTCGCCAGCCACAGCCTGCGGTGCGTG CAGATCTGCATGTGCATCGCGGAGGACATCGCCGTGGTGGACGCCCCGCGCCTGGAGCGG CTATTGATTTGGGAGATGTTTGAGGATGACAACCATGCCACCAGATTGAGCATTGGCCAT GCCCCCAATCTACAGTTGCTGGGATACTTGAGGCCAGGAATACATGTCCTGGAGAACGGC AACACCATCATCAAGGCTGGGACAAAGGCGAGCCCAAGAACCATCATCCCAAGCATCAAT GTATTGGCCTTGAAGGTGCGTTTTGAAGTCCGCAATGAAGCCAAGTTGCTGCCTAGCTTC CTGAGATGCTTTCCCAATGTCGAGAAGCTGCACGTCAAGTCCGAGAAATCAGATGAACCG GTTGGCAGGCTCAACCTCAAGTTCTGGCAGGAGGCTGGTCGCATAGAATGCTTGCAATCG TGCATCAAGTATGTGGTTTTCCATGGGTACCGAGGGGATCGTAGCGAGCTCACCTTCCTG AAGTACATCCTGGGAAGTGGACAGGTGCTGCAGGAGATGGTGATCGTGGTCGCGAATGGA ATGTTCTCCACACAGGATGAGGTGGGCGAGAAACTGGTGAAGCCTCTGAGTTCTGTCAAG ATGGCCAGTGGAGACTGTAATATAACGGTCGTTGAGGGCACAGTTCATGATGAAGAAGAT TCTTGTTGCCTCCGTGATGCGTTTGATTTTTCTATCGATGACCCCTTTGATCGCTACTTA TAG

Peptide Sequence

PEP ID	Os01t0596100-01
PEP Infomation	pep chromosome:IRGSP-1.0:1:23363801:23365877:1 gene:Os01g0596100 transcript:Os01t0596100-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:F-box protein 25 description:Cyclin-like F-box domain containing protein. (Os01t0596100-01)
Sequence	MDYRALMTMEKVLVQMEKDGVDSRMLDLGADCMCKLLVASLPDPPVYPDAVLSANDDDDL SGAGAEDRIGALPDDLLGGVVSRLPIKDAVRTAALSSRWRRIWLSAPLVLVDGHLLPPGE EAGQLALDASGAVAAAVSRVLEAHPGPFRYVELTSTAMGARARRGDLARWLHLLAVKGVR ELVFVNRRRPLDVALPATVFALAPLSRLYLGTWKFPDTAALPRGAGFPHLRELGLYCVAM EDRDLDFVLANSPVLECLGIYYSQRQIVLLRLASHSLRCVQICMCIAEDIAVVDAPRLER LLIWEMFEDDNHATRLSIGHAPNLQLLGYLRPGIHVLENGNTIIKAGTKASPRTIIPSIN VLALKVRFEVRNEAKLLPSFLRCFPNVEKLHVKSEKSDEPVGRLNLKFWQEAGRIECLQS CIKYVVFHGYRGDRSELTFLKYILGSGQVLQEMVIVVANGMFSTQDEVGEKLVKPLSSVK MASGDCNITVVEGTVHDEEDSCCLRDAFDFSIDDPFDRYL

Transcript Sequence

Transcript ID	Os01t0596100-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:1:23363801:23365877:1 gene:Os01g0596100 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:F-box protein 25 description:Cyclin-like F-box domain containing protein. (Os01t0596100-01)
Sequence	GTTGCCTCGCCTCCTCGCCGTCCGGCCCACCCACCACCCCGGCGGCGGCGGCGGCCATGG ATTACCGGGCGCTCATGACGATGGAGAAGGTCCTTGTTCAGATGGAGAAGGACGGCGTGG ACTCGCGGATGCTGGACCTCGGCGCCGACTGCATGTGCAAACTCCTCGTGGCATCCCTCC CCGACCCGCCCGTCTACCCCGACGCCGTCCTCTCGGCCAACGACGACGACGACTTGTCCG GCGCCGGCGCCGAGGACCGCATCGGCGCGCTCCCCGACGACCTCCTCGGCGGCGTCGTCT CCCGCCTCCCTATCAAGGACGCCGTGCGCACCGCCGCGCTGTCTTCACGGTGGCGCCGCA TCTGGCTCTCCGCGCCGCTCGTCCTCGTCGACGGCCACCTCCTCCCGCCGGGCGAGGAGG CGGGCCAACTCGCGCTCGACGCCAGCGGCGCCGTCGCCGCCGCGGTGTCGCGCGTCCTCG AGGCCCACCCGGGCCCCTTCCGCTACGTCGAGCTCACCTCCACCGCCATGGGGGCTCGCG CTCGCCGCGGCGACCTCGCGCGCTGGCTCCACCTCCTCGCCGTCAAGGGCGTCCGCGAGC TCGTCTTCGTGAACCGCCGCAGGCCCTTGGACGTCGCCCTCCCCGCCACGGTGTTCGCCC TCGCGCCCCTCAGCCGCCTCTACCTCGGCACCTGGAAGTTCCCGGACACCGCCGCCCTCC CGCGCGGCGCCGGCTTCCCCCACCTCCGGGAGCTCGGCCTCTACTGCGTCGCCATGGAGG ACCGGGACCTCGACTTCGTCCTCGCCAACAGCCCCGTCCTGGAGTGCCTCGGCATCTACT ACAGCCAGAGGCAGATTGTGCTCCTCCGCCTCGCCAGCCACAGCCTGCGGTGCGTGCAGA TCTGCATGTGCATCGCGGAGGACATCGCCGTGGTGGACGCCCCGCGCCTGGAGCGGCTAT TGATTTGGGAGATGTTTGAGGATGACAACCATGCCACCAGATTGAGCATTGGCCATGCCC CCAATCTACAGTTGCTGGGATACTTGAGGCCAGGAATACATGTCCTGGAGAACGGCAACA CCATCATCAAGGCTGGGACAAAGGCGAGCCCAAGAACCATCATCCCAAGCATCAATGTAT TGGCCTTGAAGGTGCGTTTTGAAGTCCGCAATGAAGCCAAGTTGCTGCCTAGCTTCCTGA GATGCTTTCCCAATGTCGAGAAGCTGCACGTCAAGTCCGAGAAATCAGATGAACCGGTTG GCAGGCTCAACCTCAAGTTCTGGCAGGAGGCTGGTCGCATAGAATGCTTGCAATCGTGCA TCAAGTATGTGGTTTTCCATGGGTACCGAGGGGATCGTAGCGAGCTCACCTTCCTGAAGT ACATCCTGGGAAGTGGACAGGTGCTGCAGGAGATGGTGATCGTGGTCGCGAATGGAATGT TCTCCACACAGGATGAGGTGGGCGAGAAACTGGTGAAGCCTCTGAGTTCTGTCAAGATGG CCAGTGGAGACTGTAATATAACGGTCGTTGAGGGCACAGTTCATGATGAAGAAGATTCTT GTTGCCTCCGTGATGCGTTTGATTTTTCTATCGATGACCCCTTTGATCGCTACTTATAGG GAACTCAATGCTGCCTGTGTTTGATCGTCAAGTGGTTTCTGCATTGTGCACCCTAATTTG ATTGTGCAGATACCTGCCAGTCAGATATTATATGATTCATGCAGTCACTCTGATAATCTC TGTATGTTTTCTTCTACTGCGTGTGC