Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os01t0595900-01
CDS Infomation	cds chromosome:IRGSP-1.0:1:23357007:23359952:1 gene:Os01g0595900 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:F-box protein 23 description:Cyclin-like F-box domain containing protein. (Os01t0595900-01)
Sequence	ATGCCTACGCTGGTCGCCGCCGGCGGGATGAGAGCTACCGAGCGCGCCCGCCACCCGCGA TCGAGCCACGGTCCCCGTCCGCACCTGGACCACATCATGGCTAGGGCGATGTGCGCCCAC GCCATGGAGGAGTCGACGGACACCATGGAGGGCATCATGCGCGTCGTCCTCACCTGCCTC CCCACCCCGGCGCCCTTCTCCACATCCCACGGCTCCCTCTCTTCCTCGGCGGGCGGTGGC GGCGGCAGCGGCGGCGGCGGCGATGACCGCATCAGCCGCCTTCCGGGCGCGCTGCTCTCT AACATCGTGTCCCGCCTCCCGGCCAGGGACGCGGCGCGCACCGCCGTGCTCTCCACGCGC TGGCGCCGCGTCTGGGCGTCCACGCCGCTGGTCCTCGACGACGTCGACCTCCTCGACATC CCCGACGAGGACCTCCGGCGCGGCCACTCCCACCGCGTCGACCTGGCCGCCGCCGCCTCC CGCGTGACCCGCGTCCTCACCTCCCACCGGGGCCCCTACCTCTGCGTCCACCTCACCTGC TGCAACATGGCCACCCACTGGCCGATGCTCTCCTACTGGCTCAGCCTCCTCGCCGCCAAT GGCGTCCAGGACCTCGTCTTCGCCAACCGCCCCTACCCGCTCGACCTGCCCCTCCCCGTC GATATCCTCCGCATCCCTTCCCTCCGCAGCCTCTACCTCGCGTTCTGGACCTTCCCGGGC ATCCCCGGCGGCGCGCGCGGCCCCCACGTCTTCCCGCACCTCCGGGAGCTCGGCCTCTGC TTCATCAGCATCGACGCCCAGGACCTCGACGGCTTGCTCCAGTGCAGCCCCGTCCTGGAG ACGCTCGCGCTCGTCTCCAACTCCTACTCCCCCGCTCACATCCGCGTGCGCAGCCGCACC CTCCGCTGCGTGCTCTTCTGGATGTCGCTGGCGCAGGAGATCGCCTTGGTCGTCGCCCCG CGCCTCGACCGCCTCATCCTGTGGAAGACGTTCATGGGTTTCCCCGGCGAAATCTTTTGC CGCACAAGGGTCAAGATTGGTTACGCCACAGAGCTGCGAGTCCTGGGCTACTTGGAACCA AGAATGCACGAGCTGGAGATCGGCAATACCACCATCGAGGCTGGAACAAAGATGAGTTCA GATAAAACGGTACCAAGTGTCAAAATCTTGGCCTTGAAGGTGCGATTTGGGATCCGCAAT GAAGCCAAGTTGCTGCCCGTCTTTCTCAGATGCTTTCCCAATGTTGAGACATTACATGTC ATGTCAGATGATGCTCATGATCCTACCGGCAAGCTCAATCTCAAGTTCTGGCATGACGTC GGCCCAATCGAGTGCCTGCACTCACACGTCAATAAGGTGGTGTTTCACATGTTCAGAGGG GAGCGGAGCGAGCTCGCGTTCCTCAAGTTCATCCTGGAGAGGGCCGAGGCATTGCAGAAG ATTGTGGTTGTGTTGGCCAACAGAGACCAGGCCTGGGTGGACGAGATGCGCGCCAAGCTG AGGCCCCTGGCCATGGCGAAAAGGGCCAGCAAGAACCCTACGCTCTTGATCGTTGCGCTT GAAGGTGGTAGTGCTTGGTCCTTCCACAGAGCATCCGATCTCTCTGTGAATGACCCTTTT GACTACTGCTGA

Peptide Sequence

PEP ID	Os01t0595900-01
PEP Infomation	pep chromosome:IRGSP-1.0:1:23357007:23359952:1 gene:Os01g0595900 transcript:Os01t0595900-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:F-box protein 23 description:Cyclin-like F-box domain containing protein. (Os01t0595900-01)
Sequence	MPTLVAAGGMRATERARHPRSSHGPRPHLDHIMARAMCAHAMEESTDTMEGIMRVVLTCL PTPAPFSTSHGSLSSSAGGGGGSGGGGDDRISRLPGALLSNIVSRLPARDAARTAVLSTR WRRVWASTPLVLDDVDLLDIPDEDLRRGHSHRVDLAAAASRVTRVLTSHRGPYLCVHLTC CNMATHWPMLSYWLSLLAANGVQDLVFANRPYPLDLPLPVDILRIPSLRSLYLAFWTFPG IPGGARGPHVFPHLRELGLCFISIDAQDLDGLLQCSPVLETLALVSNSYSPAHIRVRSRT LRCVLFWMSLAQEIALVVAPRLDRLILWKTFMGFPGEIFCRTRVKIGYATELRVLGYLEP RMHELEIGNTTIEAGTKMSSDKTVPSVKILALKVRFGIRNEAKLLPVFLRCFPNVETLHV MSDDAHDPTGKLNLKFWHDVGPIECLHSHVNKVVFHMFRGERSELAFLKFILERAEALQK IVVVLANRDQAWVDEMRAKLRPLAMAKRASKNPTLLIVALEGGSAWSFHRASDLSVNDPF DYC

Transcript Sequence

Transcript ID	Os01t0595900-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:1:23357007:23359952:1 gene:Os01g0595900 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:F-box protein 23 description:Cyclin-like F-box domain containing protein. (Os01t0595900-01)
Sequence	GCCCTCTCTCTTCCTCGGCACCGGCCGGCCGGAGCGAGACGCCGCCAGCCGCCGGCAATG CCTACGCTGGTCGCCGCCGGCGGGATGAGAGCTACCGAGCGCGCCCGCCACCCGCGATCG AGCCACGGTCCCCGTCCGCACCTGGACCACATCATGGCTAGGGCGATGTGCGCCCACGCC ATGGAGGAGTCGACGGACACCATGGAGGGCATCATGCGCGTCGTCCTCACCTGCCTCCCC ACCCCGGCGCCCTTCTCCACATCCCACGGCTCCCTCTCTTCCTCGGCGGGCGGTGGCGGC GGCAGCGGCGGCGGCGGCGATGACCGCATCAGCCGCCTTCCGGGCGCGCTGCTCTCTAAC ATCGTGTCCCGCCTCCCGGCCAGGGACGCGGCGCGCACCGCCGTGCTCTCCACGCGCTGG CGCCGCGTCTGGGCGTCCACGCCGCTGGTCCTCGACGACGTCGACCTCCTCGACATCCCC GACGAGGACCTCCGGCGCGGCCACTCCCACCGCGTCGACCTGGCCGCCGCCGCCTCCCGC GTGACCCGCGTCCTCACCTCCCACCGGGGCCCCTACCTCTGCGTCCACCTCACCTGCTGC AACATGGCCACCCACTGGCCGATGCTCTCCTACTGGCTCAGCCTCCTCGCCGCCAATGGC GTCCAGGACCTCGTCTTCGCCAACCGCCCCTACCCGCTCGACCTGCCCCTCCCCGTCGAT ATCCTCCGCATCCCTTCCCTCCGCAGCCTCTACCTCGCGTTCTGGACCTTCCCGGGCATC CCCGGCGGCGCGCGCGGCCCCCACGTCTTCCCGCACCTCCGGGAGCTCGGCCTCTGCTTC ATCAGCATCGACGCCCAGGACCTCGACGGCTTGCTCCAGTGCAGCCCCGTCCTGGAGACG CTCGCGCTCGTCTCCAACTCCTACTCCCCCGCTCACATCCGCGTGCGCAGCCGCACCCTC CGCTGCGTGCTCTTCTGGATGTCGCTGGCGCAGGAGATCGCCTTGGTCGTCGCCCCGCGC CTCGACCGCCTCATCCTGTGGAAGACGTTCATGGGTTTCCCCGGCGAAATCTTTTGCCGC ACAAGGGTCAAGATTGGTTACGCCACAGAGCTGCGAGTCCTGGGCTACTTGGAACCAAGA ATGCACGAGCTGGAGATCGGCAATACCACCATCGAGGCTGGAACAAAGATGAGTTCAGAT AAAACGGTACCAAGTGTCAAAATCTTGGCCTTGAAGGTGCGATTTGGGATCCGCAATGAA GCCAAGTTGCTGCCCGTCTTTCTCAGATGCTTTCCCAATGTTGAGACATTACATGTCATG TCAGATGATGCTCATGATCCTACCGGCAAGCTCAATCTCAAGTTCTGGCATGACGTCGGC CCAATCGAGTGCCTGCACTCACACGTCAATAAGGTGGTGTTTCACATGTTCAGAGGGGAG CGGAGCGAGCTCGCGTTCCTCAAGTTCATCCTGGAGAGGGCCGAGGCATTGCAGAAGATT GTGGTTGTGTTGGCCAACAGAGACCAGGCCTGGGTGGACGAGATGCGCGCCAAGCTGAGG CCCCTGGCCATGGCGAAAAGGGCCAGCAAGAACCCTACGCTCTTGATCGTTGCGCTTGAA GGTGGTAGTGCTTGGTCCTTCCACAGAGCATCCGATCTCTCTGTGAATGACCCTTTTGAC TACTGCTGAAGCTCAAGATGATCAGGTTTCAGTATGACAGTACCTACATGACAGCCAGTT AGCCATTTTCAGATGCTTGACAAATTTTGCACGACCTATATCAGCTCTGACAAGGATAAG CAGAATTTGCTGTCACAACTAGTAAGTCTTAACAAATACTATTTTATTCTTGGAGAATGG GAAGCTTCATGCTTCAGTAACTACATAATGCCAGATATTCTTTCAGATGATACAGTAGAT AATAGGCATGTCTTATGTTTTACTAGCACAGACAATGTCAGCTCCCACAAGCATGAGCAC ATATTTGGCTGTAACAAGCATGAGTACAACTCTTAACTTGTGGTCTGTGGAAGTGAGATT TTTGTTGCCACACATGCCGGGTATAGGTGAAAGTTTGCAGAAACTACTCATATCAACACA TATATTTGCAAGAGCTACTTTCGATCGTCGTGTCATGTATGCTCACAAACTGAATTGAAG CATTGTTGATGCAACTTTGGTTATCTGCAAGGTTTAACTAGCTGTTTGCTGCTATAGATG TGTGGTCCAATGGTTCATCTTTGATCAGAGTGCATTGTGTATGGCTGTGTGCTGTGCATG GAATCATATTGTCATAGCTGTTAACATGGTACAAATTACTCCTAGCATGTGAATAGAAAC CATGTGTGTGGTCACTTGGATTGGTTGTCCACATTGGACTATCAGGCTGCCCTGGTGTTC GTGAAGTTGTAACCAAACGTAGGCACAAGCAGCTGCAGGGCTCCTGAGCAATTTGGCTGG ATTATCTGATAGCAGATCAGGTTTTCTCAATGTTTTGTTTCCGGGGTGACATGTGCATAT ATCACTTTTGGTTCCGGGGTGATAGCAGAGCAGGATGCACACAATCATGAAGACTTATAT GGCACTTGGTAACAAATGTACAATAATAGACGCTCAGAAGCTTCCTTTGCTCATCTGTAT CTAAATTATCTGTCAGTTCTGGAGAACAATCAGAAAAAAAAAAGGTGAAGCTTCCTTTTG