Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os01t0595100-01
CDS Infomation	cds chromosome:IRGSP-1.0:1:23316218:23322871:1 gene:Os01g0595100 gene_biotype:protein_coding transcript_biotype:protein_coding description:Hypothetical conserved gene. (Os01t0595100-01)
Sequence	ATGGCCGACCCGACGACGCCGGCGGACGCGCAGCCGGAGCAGGCCCACGCCGCCGAGAAG CCCCCCGCGGCGCCGCTGACGCCCGAGGAGGCGGAGGCGGAGGCGGAGACGGCGGGGTCC GGGGATGACGAGGAGTACGTGAGCGACCCCGACGACGCGCTGCTCCCGGAGATGCGGCGC CGGGAGGCCAGCGACGACGAGGGGTCCGAGGAGGGGAGGGCGCGGATCGGGTCCGACCGC GGCGACGGCGACGACGGCGACGGGCAGGGCGCAGCCGAGGTGTACGAGGACGAGGCCTAC GAGGACGATGACGAGGAGTACTACGATGATTTGGCGGAGGAGGAGGTCGGCGAGGGCTTC GAGGAGGAGTACGACGGCCGCGCGGAGCCGCCCAAGGAGGTCGCCGGTGCCCAGGGGGAG GATGGGGAGAAGGGCGACGTGGAGGGAGAGGCGGCGGTGGAAGGGGATGGAGAAGAGAAG AAGGAGCAGGAGCCGTTTGCGGTACCCACGTCCGGCGCCTTCTACATGCACGATGACCGC TTCCAAGAGGAGAGTCGTGGCCGCCGCAGGAGAATGTTTGGTGGGAGGAAGTTATGGGAC GCTAAAGATGATCAAGCGTGGGTGCATGACAGATTTGAGGAAATGAATTTGCATGAGGAG CACTATGAGGATAAGCGAATGTCAAGGGGTCGCTTTAGAGGCCGTGGTGGTGGGGGTAGA ACTCGGGGCACTGGTCATGGGTTTGCCAGAGGTGGAAAGTATCGCGGTTATAATGAAGAT ATCAACAACAACCACCAAAACCGACCCCAAAAGGTTGTTAGAGGGAGAGGACCTCGACGT TATGAAGCTGTTGCAAAGAACAACCGAGATGTTGTTGGATTCCAGCGGAAACAACCTGCA AGATCACGAGAGTCTGCTGCAAGTGCTTCAGCCGTCAGAGAGAGTGGCCAAACTTTAAAT GCGCAGTCAGAAATGGCCCCTCCTAAAAAGAATGTTGTGAATTCAAGCTTAAATTCAGCG TCACCACCATTTTATCCCTCTGGTGCCTCCAACCCAGATTTCTCTGTGCCAGCTCAAAGA AGGGACAATATGCAAGCAGGGGGTTCCAATAAAGTCTTTCCATCTTCTATGAAGATGGAT GACAATGCAAAGGTACAATCTGGCCCAGCAGTTAGAAGGGATTATGGTGCACGTGACAGG TTTCAACATGCTGATGGTCCTGTTAGACAATCTCCAAGGAGTGGAGGAACATCGTTGAAT TCATCAGGATTTGCAGCATCGACAGTTAATCATGGTCAATCTTCTGTTGTTAGAACTCAA GGAGGAAATGGGATTCCTTCAAACAATCAGTCCACTTCGTCTCTTCACCAAAATCCTAGG GCTCCTACACACCAGCAAAGTCACACATCAGTCGTGCACCAGAAGTCAGGGCAAGTGCAA ACTCAATCTGCAATGAGAATACCAACTCAGCAGTTGAACCATCGCACTGGCAACCCGTCA ACCACTCAGCATCTACCTGTTAGATCAACTGAAAGTGTTGAGAATGGTCTGTATCCTAGT TCGAACAAATCAAATGCATCATCTGGGGCAGGAAAAACCAACAGTCAGGAAGCAGGAAGG GGTTCCTTTATGTATGGTGGAGCCCAGGTTATTGGGGCTGCTGGGGCTATTGGTCTTGCC CAGGGCGAACAAAATTTTCCTGGCACTCCAGCTCTCCTTCCAGTCATGCAATTTGGCAGT CAGCATCCTGGTGGTGTTGGAGTTCCTACTGTTGGTATGGCCCTCCCTGGCTATGTGGCT CAACAGCAGATGGGAATGGGAAATAACGAAATGACATGGTTGCCACTGTTAACTGGTGCA GCTGGTGCTTTTGGAGGATCATATCCACCTTATATTGCTCTGGATCCAGCCTTTTACTCC AGATCTTCAGGACAGACCTCATCGTCAGTTCCTTCCAGGGAATCTATTGCTAACAAGGGG GCTTCCCCTCCTCGAAATGATATTGTCAATGAAGAGGTTGATCAGCGTCAGAACAAGCCT AGGAGATACTCAGAGATGAACTTCAGTCAGTGA

Peptide Sequence

PEP ID	Os01t0595100-01
PEP Infomation	pep chromosome:IRGSP-1.0:1:23316218:23322871:1 gene:Os01g0595100 transcript:Os01t0595100-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Hypothetical conserved gene. (Os01t0595100-01)
Sequence	MADPTTPADAQPEQAHAAEKPPAAPLTPEEAEAEAETAGSGDDEEYVSDPDDALLPEMRR REASDDEGSEEGRARIGSDRGDGDDGDGQGAAEVYEDEAYEDDDEEYYDDLAEEEVGEGF EEEYDGRAEPPKEVAGAQGEDGEKGDVEGEAAVEGDGEEKKEQEPFAVPTSGAFYMHDDR FQEESRGRRRRMFGGRKLWDAKDDQAWVHDRFEEMNLHEEHYEDKRMSRGRFRGRGGGGR TRGTGHGFARGGKYRGYNEDINNNHQNRPQKVVRGRGPRRYEAVAKNNRDVVGFQRKQPA RSRESAASASAVRESGQTLNAQSEMAPPKKNVVNSSLNSASPPFYPSGASNPDFSVPAQR RDNMQAGGSNKVFPSSMKMDDNAKVQSGPAVRRDYGARDRFQHADGPVRQSPRSGGTSLN SSGFAASTVNHGQSSVVRTQGGNGIPSNNQSTSSLHQNPRAPTHQQSHTSVVHQKSGQVQ TQSAMRIPTQQLNHRTGNPSTTQHLPVRSTESVENGLYPSSNKSNASSGAGKTNSQEAGR GSFMYGGAQVIGAAGAIGLAQGEQNFPGTPALLPVMQFGSQHPGGVGVPTVGMALPGYVA QQQMGMGNNEMTWLPLLTGAAGAFGGSYPPYIALDPAFYSRSSGQTSSSVPSRESIANKG ASPPRNDIVNEEVDQRQNKPRRYSEMNFSQ

Transcript Sequence

Transcript ID	Os01t0595100-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:1:23316218:23322871:1 gene:Os01g0595100 gene_biotype:protein_coding transcript_biotype:protein_coding description:Hypothetical conserved gene. (Os01t0595100-01)
Sequence	GAGAGGGAAGAAAAAGGAGAAAAAAAAAAGAAAAAATCTCACCACACCGCCGCAGCCAAA TCTAGGGTTGCTTCGCTCGCCCGCCCGCCCATGGCCGACCCGACGACGCCGGCGGACGCG CAGCCGGAGCAGGCCCACGCCGCCGAGAAGCCCCCCGCGGCGCCGCTGACGCCCGAGGAG GCGGAGGCGGAGGCGGAGACGGCGGGGTCCGGGGATGACGAGGAGTACGTGAGCGACCCC GACGACGCGCTGCTCCCGGAGATGCGGCGCCGGGAGGCCAGCGACGACGAGGGGTCCGAG GAGGGGAGGGCGCGGATCGGGTCCGACCGCGGCGACGGCGACGACGGCGACGGGCAGGGC GCAGCCGAGGTGTACGAGGACGAGGCCTACGAGGACGATGACGAGGAGTACTACGATGAT TTGGCGGAGGAGGAGGTCGGCGAGGGCTTCGAGGAGGAGTACGACGGCCGCGCGGAGCCG CCCAAGGAGGTCGCCGGTGCCCAGGGGGAGGATGGGGAGAAGGGCGACGTGGAGGGAGAG GCGGCGGTGGAAGGGGATGGAGAAGAGAAGAAGGAGCAGGAGCCGTTTGCGGTACCCACG TCCGGCGCCTTCTACATGCACGATGACCGCTTCCAAGAGGAGAGTCGTGGCCGCCGCAGG AGAATGTTTGGTGGGAGGAAGTTATGGGACGCTAAAGATGATCAAGCGTGGGTGCATGAC AGATTTGAGGAAATGAATTTGCATGAGGAGCACTATGAGGATAAGCGAATGTCAAGGGGT CGCTTTAGAGGCCGTGGTGGTGGGGGTAGAACTCGGGGCACTGGTCATGGGTTTGCCAGA GGTGGAAAGTATCGCGGTTATAATGAAGATATCAACAACAACCACCAAAACCGACCCCAA AAGGTTGTTAGAGGGAGAGGACCTCGACGTTATGAAGCTGTTGCAAAGAACAACCGAGAT GTTGTTGGATTCCAGCGGAAACAACCTGCAAGATCACGAGAGTCTGCTGCAAGTGCTTCA GCCGTCAGAGAGAGTGGCCAAACTTTAAATGCGCAGTCAGAAATGGCCCCTCCTAAAAAG AATGTTGTGAATTCAAGCTTAAATTCAGCGTCACCACCATTTTATCCCTCTGGTGCCTCC AACCCAGATTTCTCTGTGCCAGCTCAAAGAAGGGACAATATGCAAGCAGGGGGTTCCAAT AAAGTCTTTCCATCTTCTATGAAGATGGATGACAATGCAAAGGTACAATCTGGCCCAGCA GTTAGAAGGGATTATGGTGCACGTGACAGGTTTCAACATGCTGATGGTCCTGTTAGACAA TCTCCAAGGAGTGGAGGAACATCGTTGAATTCATCAGGATTTGCAGCATCGACAGTTAAT CATGGTCAATCTTCTGTTGTTAGAACTCAAGGAGGAAATGGGATTCCTTCAAACAATCAG TCCACTTCGTCTCTTCACCAAAATCCTAGGGCTCCTACACACCAGCAAAGTCACACATCA GTCGTGCACCAGAAGTCAGGGCAAGTGCAAACTCAATCTGCAATGAGAATACCAACTCAG CAGTTGAACCATCGCACTGGCAACCCGTCAACCACTCAGCATCTACCTGTTAGATCAACT GAAAGTGTTGAGAATGGTCTGTATCCTAGTTCGAACAAATCAAATGCATCATCTGGGGCA GGAAAAACCAACAGTCAGGAAGCAGGAAGGGGTTCCTTTATGTATGGTGGAGCCCAGGTT ATTGGGGCTGCTGGGGCTATTGGTCTTGCCCAGGGCGAACAAAATTTTCCTGGCACTCCA GCTCTCCTTCCAGTCATGCAATTTGGCAGTCAGCATCCTGGTGGTGTTGGAGTTCCTACT GTTGGTATGGCCCTCCCTGGCTATGTGGCTCAACAGCAGATGGGAATGGGAAATAACGAA ATGACATGGTTGCCACTGTTAACTGGTGCAGCTGGTGCTTTTGGAGGATCATATCCACCT TATATTGCTCTGGATCCAGCCTTTTACTCCAGATCTTCAGGACAGACCTCATCGTCAGTT CCTTCCAGGGAATCTATTGCTAACAAGGGGGCTTCCCCTCCTCGAAATGATATTGTCAAT GAAGAGGTTGATCAGCGTCAGAACAAGCCTAGGAGATACTCAGAGATGAACTTCAGTCAG TGAAGCACCATGTAAGGTGAATAGCATCTGAATAAGCTGCTTATGGCTATATTTTTAAGC CCTTAGTGATCTCCTGTTTTGATCTGGAGCACTTTGGGTGGCTTCTTGTCCTAAGTTATG TTAGGTTATAAACGCCTGTTTGTGCTGGTGTCACTTCACAGCAGACTCAGGGGTGGCCTT TGTTGCTTGAATTGTGGTTTTGCTCGGTTGTGATGCGTTGAGAAATGTCAAATTCGTTGG TTGCGTCTGAAGATGTGGGCGGTTCTTGAAGAGAGCTTGGAATAATGATCTGCGTTGGTT GATAAAAGTTTGGGTTTTTTAGTACATCTTTTTAGCGACTGTACTTTGTGTCGATCTGAT ATACCTATCCTCTTATAGTGGTATTTGTTAGCACAAGTGGCTTTATAGCTGCAGTTTGTA TCTCTTGAACAATGTGTAAACCTGGGTGCGATTTGTGACAAGTTTACAGCTTGAATGAGT C