Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os01t0592900-02
CDS Infomation	cds chromosome:IRGSP-1.0:1:23174880:23186976:-1 gene:Os01g0592900 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:RTEL1 description:Similar to regulator of telomere elongation helicase 1. (Os01t0592900-01);Similar to regulator of telomere elongation helicase 1. (Os01t0592900-02)
Sequence	ATGCCGGTGTACAGGATCCGCGGCGTCGACGTCGACTTCCCCTACGACGCCTACGACTGC CAGATCACATACATGGACCGCGTCCTCGAATCCCTCCAGCAGGGGAAAAACGCGCTGCTG GAGAGCCCCACGGGGACGGGGAAGACGCTGTGCCTCCTCTGCTCGGCGCTCGCGTGGCGC CGCACCTTTGGGGAGTTTCTGCGTGGAGGCGGAGGCGGCGGGGGCGGGGGCGGGGGCGGG GGCGGGGGCGGGAGCCAGCAGCCGCCGTATGGGAGCCAGCCTTCTGGGAGCCAGCACTCG GGGGGTTCGGCGTCGCAGTCGTCTCGGTACCCCGTGATCATCTACGCCTCACGGACTCAC AGCCAGCTCCGGCAGGTCATCAAGGAGCTCAAGGCCACCAGTTACAGGCCAAAAATGGCA GTACTGGGCTCCCGCGAGCAGATGTGCATCCACGAGGAAGTGAGCAAACTCCGGGGAAGG CAACAAAACAACGCCTGCCACTACCTCTGCAAGAAACGGTGGTGCCGCCATCACAACTCT GTCGCTGAATTCATGAGGAACAACAGTGAGCTTGGGAGTGAGGCTTGCGACATTGAAGAC TTGGTTAATATTGGGAGAACTAAGGGCCCGTGTCCATATTACATCTCCCGGGAACTTTCC AAGTCGGTTGATATTCTTTTTGCTCCATACAACTATCTTATTGATCCAGGAAATCGACGT TCTTTAAATGGAATACCATGGGATAATGCAGTACTTATATTTGATGAAGCACACAACTTG GAGAGTATATGTGCAGATGCTGCATCTTTTGACTTGCTTCCCAATAACCTCTCTTCTTGC ATTGCGGAAGCTCAGGAATGCATCCAATTGTGTTCAGCAAAGAGGACCTTTGAAAATTCT GCTGATAAACAATTTGACCCTGAAAATTATGCTATTCTCAAAGCCCTTTTAATGGCACTT GAAAAGAAAATTAGTGAGGTGGTGATTGATTCCAAGGAGCTGGGCCATACAAAACCTGGC AATTACATATATGAGTTCCTCTCTGAACTGAATATTACTTCTGAAACATCCAAAAAGCTA ATTGACACAATTGATGGTGCTTCTCTATTACTTGAGGAAGGAAATTCTGCTGAAACTGGA CCTGGGATGAAGGCGAAGGCTACTGTCTGTAGATTGGAAACAATCAGGGACATTCTTGAC ATAATTTTTAGAGGTGGTGGTCAAAGCCATGCAAAGTATTATCGTTTTCATGTGAATGAA TGCCAACAAAATTCTGGAGATGCTCTTAAAGTTTTGGGTAAGGTATCAAGGACTCTTAGT TGGTGGTGTTTTAACCCAGGGCTTGCTATGGAAGAGTTTCTCAAGTTGGGTGTGCGCTCG ATTATATTAACATCTGGCACTTTATCTCCCTTGGATTCACTTGCCCTGGAACTAAACCTG GAATTTCCAGTTAGGCTAGAGAACCCACATGTCATTGCTTCAGATCAAATCTGGGTTGGA GTTGTGCCTGTAGGCCCATCAGGACATCCACTTAATTCTTCTTACCGGACGCGTGAGACT CTGAAATACAAACAAGAATTGGGTATAACTATTGTTAATTTCGCCCGCATTGTACCAGAT GGTCTGCTTGTTTTCTTTCCGTCATATTCTATGATGGATAAGTGTATCAACTGCTGGAAA GATAGGAACCATGAAAATTCAAGTGATGAGCACACAATTTGGCAACGAATCTGCAAGCAC AAGCAGCCAGTTATAGAGCCTAGGCAGTCATCGAACTTTCCAAATGCAATCGAGGATTAT GCAGCCAAGCTACGTGATTCTTCTACAACCGGGGCAATATTTTTTGCAGTTTGTCGGGGC AAAGTTAGTGAGGGTCTTGATTTTGCTGACCGTGCTGGAAGAGCTGTAATAGTTACTGGA ATGCCCTTCGCTACCCCAACTGATCCTAAGGTTCGGCTCAAGCGTGATTATTTGGATAAG CTGGGTTCAGCATCTAACAAGAACTCAAAGGCTTTGACAGGGGAGGAATGGTATGTACAA CAAGCGGCAAGAGCTGTCAATCAGGCTGTTGGACGTGTCATTAGACATCGCCATGACTAT GGAGCAATTATTTATTGTGATGAAAGGTTTGTTTGGCAAAATTATCAATCTCAGATGTCA TATTGGCTGCGACCTTACATAAAATGCTATAAAAAGTATGGGGAAGTAGTCCAAGGGTTA ACAAGATTTTTCCGAGATAAAGTGTCTATTGATTCTTCAAAGCCAAATGAGACAGATTTT AATGATAATATTGTACTGCTTGCAGACAAACATAAACCTCAGGAGACTATATCTGCTTTG GCTGTCACCACAGCAAATGAGAACCAGAGAACTGCATTATCTGTGAATCCAACCACCAAA AGAAGTAACTATATCAAGTTTGCCCAGATCACTCCTGCCAATCGCTCTACCCTTTCTATG AAACATGGCTGTTCATCTACTTCGCAGCTCTTATACTCAGGAGACAAACTGTCTACGGAT GCTCAGGTTATTGATTTGGCTGCTGATGTGGCAACAAGTCATCTTGCAGGATATAGATTT AAGTCCTTAGGACCTAAAAAGGCTAAAGTAATGGTTGGATCCAAAGATGTTTGTTTTGAT GATGGATCTCCAAAATTGCAACATAATGTTGAGTCAAGAGCTTTGGCTGGGTGCTTGGGT GAGCAATCTACAGCTTCATCAAAGAAGAGTAATATTACACATGCACCTGGAAACAGTGGG GCTATTCATGAGAAATCTGGAGGCCAGGAATCTAATGCAGGGCCAGCCTTCTTGAAGCTG GCTCGAGAAAAGCTCAGTACTGCAGAGTACAGAGATTTTGTTGAATATATGAAGGCCTTA AAATTGAAAACCATGCACATAAAGGACTCACTTGATGCAATAGCAAAACTGTTTTCGTCT CCAGAGCGACTCCCACTTCTTGAAGGGTTTAGGGTTTTTGTTCCTAAGAATCATCTTTCA TTATATGAGCAGCTTGTTCAAAGCTATACTGTGCCAAATACATGA

Peptide Sequence

PEP ID	Os01t0592900-02
PEP Infomation	pep chromosome:IRGSP-1.0:1:23174880:23186976:-1 gene:Os01g0592900 transcript:Os01t0592900-02 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:RTEL1 description:Similar to regulator of telomere elongation helicase 1. (Os01t0592900-01);Similar to regulator of telomere elongation helicase 1. (Os01t0592900-02)
Sequence	MPVYRIRGVDVDFPYDAYDCQITYMDRVLESLQQGKNALLESPTGTGKTLCLLCSALAWR RTFGEFLRGGGGGGGGGGGGGGGGSQQPPYGSQPSGSQHSGGSASQSSRYPVIIYASRTH SQLRQVIKELKATSYRPKMAVLGSREQMCIHEEVSKLRGRQQNNACHYLCKKRWCRHHNS VAEFMRNNSELGSEACDIEDLVNIGRTKGPCPYYISRELSKSVDILFAPYNYLIDPGNRR SLNGIPWDNAVLIFDEAHNLESICADAASFDLLPNNLSSCIAEAQECIQLCSAKRTFENS ADKQFDPENYAILKALLMALEKKISEVVIDSKELGHTKPGNYIYEFLSELNITSETSKKL IDTIDGASLLLEEGNSAETGPGMKAKATVCRLETIRDILDIIFRGGGQSHAKYYRFHVNE CQQNSGDALKVLGKVSRTLSWWCFNPGLAMEEFLKLGVRSIILTSGTLSPLDSLALELNL EFPVRLENPHVIASDQIWVGVVPVGPSGHPLNSSYRTRETLKYKQELGITIVNFARIVPD GLLVFFPSYSMMDKCINCWKDRNHENSSDEHTIWQRICKHKQPVIEPRQSSNFPNAIEDY AAKLRDSSTTGAIFFAVCRGKVSEGLDFADRAGRAVIVTGMPFATPTDPKVRLKRDYLDK LGSASNKNSKALTGEEWYVQQAARAVNQAVGRVIRHRHDYGAIIYCDERFVWQNYQSQMS YWLRPYIKCYKKYGEVVQGLTRFFRDKVSIDSSKPNETDFNDNIVLLADKHKPQETISAL AVTTANENQRTALSVNPTTKRSNYIKFAQITPANRSTLSMKHGCSSTSQLLYSGDKLSTD AQVIDLAADVATSHLAGYRFKSLGPKKAKVMVGSKDVCFDDGSPKLQHNVESRALAGCLG EQSTASSKKSNITHAPGNSGAIHEKSGGQESNAGPAFLKLAREKLSTAEYRDFVEYMKAL KLKTMHIKDSLDAIAKLFSSPERLPLLEGFRVFVPKNHLSLYEQLVQSYTVPNT

Transcript Sequence

Transcript ID	Os01t0592900-02
Transcript Infomation	cdna chromosome:IRGSP-1.0:1:23174880:23186976:-1 gene:Os01g0592900 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:RTEL1 description:Similar to regulator of telomere elongation helicase 1. (Os01t0592900-01);Similar to regulator of telomere elongation helicase 1. (Os01t0592900-02)
Sequence	CCCCCCCCAAAATCCCCGATTTCCCGCCCACTCCGTCCCCTCCCCCTCCGCCTCCGGCGG CCGCCGCCGCCGCAATGCCGGTGTACAGGATCCGCGGCGTCGACGTCGACTTCCCCTACG ACGCCTACGACTGCCAGATCACATACATGGACCGCGTCCTCGAATCCCTCCAGCAGGGGA AAAACGCGCTGCTGGAGAGCCCCACGGGGACGGGGAAGACGCTGTGCCTCCTCTGCTCGG CGCTCGCGTGGCGCCGCACCTTTGGGGAGTTTCTGCGTGGAGGCGGAGGCGGCGGGGGCG GGGGCGGGGGCGGGGGCGGGGGCGGGAGCCAGCAGCCGCCGTATGGGAGCCAGCCTTCTG GGAGCCAGCACTCGGGGGGTTCGGCGTCGCAGTCGTCTCGGTACCCCGTGATCATCTACG CCTCACGGACTCACAGCCAGCTCCGGCAGGTCATCAAGGAGCTCAAGGCCACCAGTTACA GGCCAAAAATGGCAGTACTGGGCTCCCGCGAGCAGATGTGCATCCACGAGGAAGTGAGCA AACTCCGGGGAAGGCAACAAAACAACGCCTGCCACTACCTCTGCAAGAAACGGTGGTGCC GCCATCACAACTCTGTCGCTGAATTCATGAGGAACAACAGTGAGCTTGGGAGTGAGGCTT GCGACATTGAAGACTTGGTTAATATTGGGAGAACTAAGGGCCCGTGTCCATATTACATCT CCCGGGAACTTTCCAAGTCGGTTGATATTCTTTTTGCTCCATACAACTATCTTATTGATC CAGGAAATCGACGTTCTTTAAATGGAATACCATGGGATAATGCAGTACTTATATTTGATG AAGCACACAACTTGGAGAGTATATGTGCAGATGCTGCATCTTTTGACTTGCTTCCCAATA ACCTCTCTTCTTGCATTGCGGAAGCTCAGGAATGCATCCAATTGTGTTCAGCAAAGAGGA CCTTTGAAAATTCTGCTGATAAACAATTTGACCCTGAAAATTATGCTATTCTCAAAGCCC TTTTAATGGCACTTGAAAAGAAAATTAGTGAGGTGGTGATTGATTCCAAGGAGCTGGGCC ATACAAAACCTGGCAATTACATATATGAGTTCCTCTCTGAACTGAATATTACTTCTGAAA CATCCAAAAAGCTAATTGACACAATTGATGGTGCTTCTCTATTACTTGAGGAAGGAAATT CTGCTGAAACTGGACCTGGGATGAAGGCGAAGGCTACTGTCTGTAGATTGGAAACAATCA GGGACATTCTTGACATAATTTTTAGAGGTGGTGGTCAAAGCCATGCAAAGTATTATCGTT TTCATGTGAATGAATGCCAACAAAATTCTGGAGATGCTCTTAAAGTTTTGGGTAAGGTAT CAAGGACTCTTAGTTGGTGGTGTTTTAACCCAGGGCTTGCTATGGAAGAGTTTCTCAAGT TGGGTGTGCGCTCGATTATATTAACATCTGGCACTTTATCTCCCTTGGATTCACTTGCCC TGGAACTAAACCTGGAATTTCCAGTTAGGCTAGAGAACCCACATGTCATTGCTTCAGATC AAATCTGGGTTGGAGTTGTGCCTGTAGGCCCATCAGGACATCCACTTAATTCTTCTTACC GGACGCGTGAGACTCTGAAATACAAACAAGAATTGGGTATAACTATTGTTAATTTCGCCC GCATTGTACCAGATGGTCTGCTTGTTTTCTTTCCGTCATATTCTATGATGGATAAGTGTA TCAACTGCTGGAAAGATAGGAACCATGAAAATTCAAGTGATGAGCACACAATTTGGCAAC GAATCTGCAAGCACAAGCAGCCAGTTATAGAGCCTAGGCAGTCATCGAACTTTCCAAATG CAATCGAGGATTATGCAGCCAAGCTACGTGATTCTTCTACAACCGGGGCAATATTTTTTG CAGTTTGTCGGGGCAAAGTTAGTGAGGGTCTTGATTTTGCTGACCGTGCTGGAAGAGCTG TAATAGTTACTGGAATGCCCTTCGCTACCCCAACTGATCCTAAGGTTCGGCTCAAGCGTG ATTATTTGGATAAGCTGGGTTCAGCATCTAACAAGAACTCAAAGGCTTTGACAGGGGAGG AATGGTATGTACAACAAGCGGCAAGAGCTGTCAATCAGGCTGTTGGACGTGTCATTAGAC ATCGCCATGACTATGGAGCAATTATTTATTGTGATGAAAGGTTTGTTTGGCAAAATTATC AATCTCAGATGTCATATTGGCTGCGACCTTACATAAAATGCTATAAAAAGTATGGGGAAG TAGTCCAAGGGTTAACAAGATTTTTCCGAGATAAAGTGTCTATTGATTCTTCAAAGCCAA ATGAGACAGATTTTAATGATAATATTGTACTGCTTGCAGACAAACATAAACCTCAGGAGA CTATATCTGCTTTGGCTGTCACCACAGCAAATGAGAACCAGAGAACTGCATTATCTGTGA ATCCAACCACCAAAAGAAGTAACTATATCAAGTTTGCCCAGATCACTCCTGCCAATCGCT CTACCCTTTCTATGAAACATGGCTGTTCATCTACTTCGCAGCTCTTATACTCAGGAGACA AACTGTCTACGGATGCTCAGGTTATTGATTTGGCTGCTGATGTGGCAACAAGTCATCTTG CAGGATATAGATTTAAGTCCTTAGGACCTAAAAAGGCTAAAGTAATGGTTGGATCCAAAG ATGTTTGTTTTGATGATGGATCTCCAAAATTGCAACATAATGTTGAGTCAAGAGCTTTGG CTGGGTGCTTGGGTGAGCAATCTACAGCTTCATCAAAGAAGAGTAATATTACACATGCAC CTGGAAACAGTGGGGCTATTCATGAGAAATCTGGAGGCCAGGAATCTAATGCAGGGCCAG CCTTCTTGAAGCTGGCTCGAGAAAAGCTCAGTACTGCAGAGTACAGAGATTTTGTTGAAT ATATGAAGGCCTTAAAATTGAAAACCATGCACATAAAGGACTCACTTGATGCAATAGCAA AACTGTTTTCGTCTCCAGAGCGACTCCCACTTCTTGAAGGGTTTAGGGTTTTTGTTCCTA AGAATCATCTTTCATTATATGAGCAGCTTGTTCAAAGCTATACTGTGCCAAATACATGAT TTGCTGCACTATTTAAAGATCAATTTCTGGAAACTTCTGTGGTAAAATGCAACCCGTGCT TCTCATATCATAATTGTGCCCTCGAGGCTTTAATGGTCAATTCAAATAGTTCTGTTGAAT TTGTTCCCATCATCTGGGACAGGGGGGGCATTGAAGAAGAAATGTAAAGCCTTTAGAGTT AACTGATGTCATAGTTTTCTAAGTGACTAATGCCCTGGCAGTTTTGTTAACTAATATACA TTATCCGATTCCACTAGGTATCATGCCAGCCAGTGCGTTGCAGATAGTGGAGTATGTGTA CCCTACTAGGTTAACTAAAACATGTATTTTCTTCATCGCGAGTGAAACTGCATTATTAGC TAAACTAGAGTGGATTGACGGGAATTGCCCACGCGTCTCTATATATAGGTCCGTGTAAAT TACTAAATCAATAACTTGAATGTAATTATCTTTTG