Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os01t0591300-01
CDS Infomation	cds chromosome:IRGSP-1.0:1:23113647:23119704:1 gene:Os01g0591300 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Cytosolic aldehyde dehydrogenase RF2D. (Os01t0591300-01);Similar to aldehyde dehydrogenase5. (Os01t0591300-02)
Sequence	ATGGGGAGCACCGGCGACTGCGGCAATGGAAAGGCGGCCGCCGGCGGCGGCGGGTTGGTG GTGCCGGAGATCAAGTTCACCAAGCTCTTCATCAACGGCGAGTTCGTCGACGCCGCCTCG GGCAAGACATTCAAGACAAGGGACCCACGAACAGGCGATGTCCTGGCCCACATCGCAGAG GCAGACAAGGCTGATGTGGACCTCGCCGTCAAGGCCGCGAGAGAGGCCTTCGAGCACGGC AAGTGGCCCCGCATGTCAGGCTATGAGAGGAGCAGGGTGATGAACAAGCTGGCCGACCTG GTGGAGCAGCACGCCGACGAGCTGGCGGCGCTGGACGGCGCCGACGCCGGGAAGCTGCTG ACGCTGGGCAAGATCATCGACATGCCCGCCGCGGCGCAGATGATGCGGTACTACGCCGGC GCGGCCGACAAGATCCACGGCGAGTCCCTTCGGGTGGCCGGCAAGTACCAGGGGTACACC CTCAGGGAGCCCATCGGCGTCGTCGGCGTCATCATCCCCTGGAACTTCCCCACCATGATG TTCTTCCTCAAGGTCAGCCCCGCCCTCGCCGCCGGCTGCACCATCGTCGTCAAGCCCGCC GAGCAGACGCCCCTCTCCGCTCTGTACTACGCTCACCTCGCCAAGCTGGCTGGAGTTCCG GATGGAGTGATCAACGTCGTCCCGGGATTCGGGCCGACAGCCGGTGCGGCACTCTCCTCC CACATGGACGTCGACAGTGTTGCTTTCACTGGCTCTGCTGAAATCGGCCGTGCCATCATG GAGTCGGCGGCGCGGAGCAACCTGAAGAATGTGTCTCTTGAGCTCGGCGGCAAGTCTCCG ATGATAGTCTTCGACGACGCCGATGTCGACATGGCTGTCAGTCTGTCATCCCTTGCAGTT TTCTTCAACAAGGGAGAGATTTGCGTGGCCGGGTCACGCGTCTATGTCCAAGAAGGGATC TACGATGAGTTTGTGAAGAAGGCCGTGGAGGCTGCCAAGAACTGGAAAGTTGGAGACCCT TTTGATGCTGCCACCAATATGGGTCCTCAGGTTGACAAGGTCCAATTTGAGAGGGTTCTC AAGTACATTGAGATCGGCAAGAACGAGGGAGCAACCCTACTCACAGGTGGCAAACCCACT GGTGACAAAGGATACTACATTGAGCCTACCATATTTGTGGATGTCAAGGAGGAAATGACG ATTGCGCAAGAGGAGATCTTCGGCCCGGTGATGTCCCTCATGAAGTTCAAGACGGTGGAG GAGGCGATAGAGAAGGCCAACTGCACCAAGTACGGGCTGGCTGCCGGCATTGTGACCAAG AACCTCAACATTGCCAACATGGTGTCGAGGTCAGTGCGGGCCGGCACGGTGTGGGTGAAC TGCTACTTCGCCTTCGACCCCGACGCGCCGTTCGGCGGGTACAAGATGAGCGGGTTCGGC CGGGACCAAGGGATGGTCGCCATGGACAAGTACCTGCAGGTCAAGACCGTCATCACCGCC GTCCCGGACTCGCCCTGGTACTGA

Peptide Sequence

PEP ID	Os01t0591300-01
PEP Infomation	pep chromosome:IRGSP-1.0:1:23113647:23119704:1 gene:Os01g0591300 transcript:Os01t0591300-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Cytosolic aldehyde dehydrogenase RF2D. (Os01t0591300-01);Similar to aldehyde dehydrogenase5. (Os01t0591300-02)
Sequence	MGSTGDCGNGKAAAGGGGLVVPEIKFTKLFINGEFVDAASGKTFKTRDPRTGDVLAHIAE ADKADVDLAVKAAREAFEHGKWPRMSGYERSRVMNKLADLVEQHADELAALDGADAGKLL TLGKIIDMPAAAQMMRYYAGAADKIHGESLRVAGKYQGYTLREPIGVVGVIIPWNFPTMM FFLKVSPALAAGCTIVVKPAEQTPLSALYYAHLAKLAGVPDGVINVVPGFGPTAGAALSS HMDVDSVAFTGSAEIGRAIMESAARSNLKNVSLELGGKSPMIVFDDADVDMAVSLSSLAV FFNKGEICVAGSRVYVQEGIYDEFVKKAVEAAKNWKVGDPFDAATNMGPQVDKVQFERVL KYIEIGKNEGATLLTGGKPTGDKGYYIEPTIFVDVKEEMTIAQEEIFGPVMSLMKFKTVE EAIEKANCTKYGLAAGIVTKNLNIANMVSRSVRAGTVWVNCYFAFDPDAPFGGYKMSGFG RDQGMVAMDKYLQVKTVITAVPDSPWY

Transcript Sequence

Transcript ID	Os01t0591300-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:1:23113647:23119704:1 gene:Os01g0591300 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Cytosolic aldehyde dehydrogenase RF2D. (Os01t0591300-01);Similar to aldehyde dehydrogenase5. (Os01t0591300-02)
Sequence	GTCCAAGAGATCTACTGTTCTCCTTGTTGAGAGGAAGCCATCCAGCCAGCTAGCTATAAG ATAGATAGAAGAAGATCAAGACGACGACCAAGTAGAGGATAGGCATCTCTCGAAGCTTAG AGACAAATAATTAACTAGAGATCAAGAGCCTATTCGTCGTCCATGGGGAGCACCGGCGAC TGCGGCAATGGAAAGGCGGCCGCCGGCGGCGGCGGGTTGGTGGTGCCGGAGATCAAGTTC ACCAAGCTCTTCATCAACGGCGAGTTCGTCGACGCCGCCTCGGGCAAGACATTCAAGACA AGGGACCCACGAACAGGCGATGTCCTGGCCCACATCGCAGAGGCAGACAAGGCTGATGTG GACCTCGCCGTCAAGGCCGCGAGAGAGGCCTTCGAGCACGGCAAGTGGCCCCGCATGTCA GGCTATGAGAGGAGCAGGGTGATGAACAAGCTGGCCGACCTGGTGGAGCAGCACGCCGAC GAGCTGGCGGCGCTGGACGGCGCCGACGCCGGGAAGCTGCTGACGCTGGGCAAGATCATC GACATGCCCGCCGCGGCGCAGATGATGCGGTACTACGCCGGCGCGGCCGACAAGATCCAC GGCGAGTCCCTTCGGGTGGCCGGCAAGTACCAGGGGTACACCCTCAGGGAGCCCATCGGC GTCGTCGGCGTCATCATCCCCTGGAACTTCCCCACCATGATGTTCTTCCTCAAGGTCAGC CCCGCCCTCGCCGCCGGCTGCACCATCGTCGTCAAGCCCGCCGAGCAGACGCCCCTCTCC GCTCTGTACTACGCTCACCTCGCCAAGCTGGCTGGAGTTCCGGATGGAGTGATCAACGTC GTCCCGGGATTCGGGCCGACAGCCGGTGCGGCACTCTCCTCCCACATGGACGTCGACAGT GTTGCTTTCACTGGCTCTGCTGAAATCGGCCGTGCCATCATGGAGTCGGCGGCGCGGAGC AACCTGAAGAATGTGTCTCTTGAGCTCGGCGGCAAGTCTCCGATGATAGTCTTCGACGAC GCCGATGTCGACATGGCTGTCAGTCTGTCATCCCTTGCAGTTTTCTTCAACAAGGGAGAG ATTTGCGTGGCCGGGTCACGCGTCTATGTCCAAGAAGGGATCTACGATGAGTTTGTGAAG AAGGCCGTGGAGGCTGCCAAGAACTGGAAAGTTGGAGACCCTTTTGATGCTGCCACCAAT ATGGGTCCTCAGGTTGACAAGGTCCAATTTGAGAGGGTTCTCAAGTACATTGAGATCGGC AAGAACGAGGGAGCAACCCTACTCACAGGTGGCAAACCCACTGGTGACAAAGGATACTAC ATTGAGCCTACCATATTTGTGGATGTCAAGGAGGAAATGACGATTGCGCAAGAGGAGATC TTCGGCCCGGTGATGTCCCTCATGAAGTTCAAGACGGTGGAGGAGGCGATAGAGAAGGCC AACTGCACCAAGTACGGGCTGGCTGCCGGCATTGTGACCAAGAACCTCAACATTGCCAAC ATGGTGTCGAGGTCAGTGCGGGCCGGCACGGTGTGGGTGAACTGCTACTTCGCCTTCGAC CCCGACGCGCCGTTCGGCGGGTACAAGATGAGCGGGTTCGGCCGGGACCAAGGGATGGTC GCCATGGACAAGTACCTGCAGGTCAAGACCGTCATCACCGCCGTCCCGGACTCGCCCTGG TACTGATAAATCAAATCAAGCAGCAGCTATAGCTAGAGTGTACCATGTACCATGAATGCT GCAGCCTGTGTAGTGTTTTCGGATGTTTTTCTCCTTAATTCTGCTGCTGCTTGGTGTGGT TGTATGTAGTTTGGTTGTGGGGTGAGATATGGTGCAGATTAAAAGGGGTTCTGATGATCA TGATCTGATCCTTGTTTGGTTGAACTTGTTGAGAAATGGATGTATAGAACTCATGTGCCA TCGTTTGAAATCGTACAAAATGTGCCTCAAAGTTCAAAGC