Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os01t0591000-02
CDS Infomation

cds chromosome:IRGSP-1.0:1:23097337:23106221:1 gene:Os01g0591000 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:ALDEHYDE DEHYDROGENASE 1A description:Aldehyde/histidinol dehydrogenase domain containing protein. (Os01t0591000-01);Aldehyde/histidinol dehydrogenase domain containing protein. (Os01t0591000-02)
Sequence

ATGGCGGCGGCGAACGGCGGCGACAGCAAGGGGTTCGAGGTGCCGAAGCTGGAGATCAAG
TTCACCAAGCTCTTCATCAATGGCCGCTTCGTCGACGCCGTCTCCGGCAAGACATTCGAA
ACCCGTGACCCGCGCACCGGCGAGGTCATCGCCAAGATCGCCGAAGGAGACAAGGCCGAC
ATCGACCTCGCCGTGAAGGCCGCCAGGGAGGCCTTCGACCATGGCCCCTGGCCAAGAATG
TCCGGCTTTGCGAGGGGAAGGATCCTGCACAAGTTCGCGGACCTGGTGGAGCAGCACGTG
GAGGAGCTGGCGGCGCTGGACACGGTGGACGCCGGCAAGCTGTTCGCGATGGGGAAGCTC
GTCGACATCCCCGGCGGCGCGAACCTGCTCCGGTACTACGCCGGCGCGGCGGACAAGGTG
CACGGCGAGACGCTCAAGATGGCGCGGCCATGCCACGGGTACACGCTCAAGGAGCCCGTC
GGCGTCGTCGGCCACATCGTGCCGTGGAACTACCCCACCACCATGTTCTTCTTCAAGGCC
AGCCCGGCGCTCGCCGCCGGCTGCACCATGGTCGTCAAGCCCGCCGAGCAGACCCCCCTC
TCCGCGCTCTTCTACGCCCACCTCGCCAAGCTTGCCGGCGTCCCCGACGGCGTGCTCAAC
GTCGTCCCCGGCTTCGGCCCCACCGCCGGCGCCGCTATCTCCTCCCACATGGACATTGAC
AAGGTGAGCTTCACCGGCTCGACGGAGGTCGGCCGGCTGGTGATGGAGGCGGCGGCGAAG
AGCAACCTGAAGCCCGTCTCGCTCGAGCTGGGTGGCAAGTCTCCGGTCATCGTGTTCGAC
GACGCCGACCTCGACACGGCCGTGAACCTGGTCCACATGGCCTCCTACACCAACAAGGGT
GAGATCTGCGTCGCCGGCTCGCGAATCTATGTCCAGGAGGGGATCTACGATGCGTTCGTG
AAGAAGGCGACCGAGATGGCCAAGAAATCGGTGGTCGGAGATCCGTTCAACCCGCGAGTT
CATCAAGGCCCTCAGATTGACAAGGAGCAATACGAGAAGATCCTCAAGTACATCGACATC
GGTAAGCGCGAAGGCGCGACGTTGGTCACCGGAGGGAAGCCCTGCGGCGAAAACGGGTAC
TACATCGAGCCCACCATCTTCACGGACGTCAAGGAAGAAATGTCGATCGCGCAAGAGGAA
ATCTTCGGGCCGGTGATGGCCCTCATGAAATTCAAGACGGTTGAGGAGGCGATCCAGAAG
GCGAACAGCACCCGGTACGGCCTGGCTGCCGGCATAGTCACCAAGAACATCGACGTCGCG
AACACGGTTTCGCGGTCGATCCGGGCAGGGGCAATCTGGATCAATTGCTACCTCGGCTTC
GACCCCGACGTGCCGTTCGGGGGGTACAAGATGAGCGGCTTCGGCAAGGACATGGGCATG
GACGCCCTTGAGAAGTACCTCCACACCAAGGCGGTGGTCACCCCTCTCTACAACACCCCT
TGGCTATGA

Peptide Sequence

PEP ID

Os01t0591000-02
PEP Infomation

pep chromosome:IRGSP-1.0:1:23097337:23106221:1 gene:Os01g0591000 transcript:Os01t0591000-02 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:ALDEHYDE DEHYDROGENASE 1A description:Aldehyde/histidinol dehydrogenase domain containing protein. (Os01t0591000-01);Aldehyde/histidinol dehydrogenase domain containing protein. (Os01t0591000-02)
Sequence

MAAANGGDSKGFEVPKLEIKFTKLFINGRFVDAVSGKTFETRDPRTGEVIAKIAEGDKAD
IDLAVKAAREAFDHGPWPRMSGFARGRILHKFADLVEQHVEELAALDTVDAGKLFAMGKL
VDIPGGANLLRYYAGAADKVHGETLKMARPCHGYTLKEPVGVVGHIVPWNYPTTMFFFKA
SPALAAGCTMVVKPAEQTPLSALFYAHLAKLAGVPDGVLNVVPGFGPTAGAAISSHMDID
KVSFTGSTEVGRLVMEAAAKSNLKPVSLELGGKSPVIVFDDADLDTAVNLVHMASYTNKG
EICVAGSRIYVQEGIYDAFVKKATEMAKKSVVGDPFNPRVHQGPQIDKEQYEKILKYIDI
GKREGATLVTGGKPCGENGYYIEPTIFTDVKEEMSIAQEEIFGPVMALMKFKTVEEAIQK
ANSTRYGLAAGIVTKNIDVANTVSRSIRAGAIWINCYLGFDPDVPFGGYKMSGFGKDMGM
DALEKYLHTKAVVTPLYNTPWL

Transcript Sequence

Transcript ID

Os01t0591000-02
Transcript Infomation

cdna chromosome:IRGSP-1.0:1:23097337:23106221:1 gene:Os01g0591000 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:ALDEHYDE DEHYDROGENASE 1A description:Aldehyde/histidinol dehydrogenase domain containing protein. (Os01t0591000-01);Aldehyde/histidinol dehydrogenase domain containing protein. (Os01t0591000-02)
Sequence

ACATCTCCAAACTTCCAATTTCTCTCTCCACATCTCTCTGTGTTTCTTTTATTTCTCCTC
TGCTCGCGGCGATGGCGGCGGCGAACGGCGGCGACAGCAAGGGGTTCGAGGTGCCGAAGC
TGGAGATCAAGTTCACCAAGCTCTTCATCAATGGCCGCTTCGTCGACGCCGTCTCCGGCA
AGACATTCGAAACCCGTGACCCGCGCACCGGCGAGGTCATCGCCAAGATCGCCGAAGGAG
ACAAGGCCGACATCGACCTCGCCGTGAAGGCCGCCAGGGAGGCCTTCGACCATGGCCCCT
GGCCAAGAATGTCCGGCTTTGCGAGGGGAAGGATCCTGCACAAGTTCGCGGACCTGGTGG
AGCAGCACGTGGAGGAGCTGGCGGCGCTGGACACGGTGGACGCCGGCAAGCTGTTCGCGA
TGGGGAAGCTCGTCGACATCCCCGGCGGCGCGAACCTGCTCCGGTACTACGCCGGCGCGG
CGGACAAGGTGCACGGCGAGACGCTCAAGATGGCGCGGCCATGCCACGGGTACACGCTCA
AGGAGCCCGTCGGCGTCGTCGGCCACATCGTGCCGTGGAACTACCCCACCACCATGTTCT
TCTTCAAGGCCAGCCCGGCGCTCGCCGCCGGCTGCACCATGGTCGTCAAGCCCGCCGAGC
AGACCCCCCTCTCCGCGCTCTTCTACGCCCACCTCGCCAAGCTTGCCGGCGTCCCCGACG
GCGTGCTCAACGTCGTCCCCGGCTTCGGCCCCACCGCCGGCGCCGCTATCTCCTCCCACA
TGGACATTGACAAGGTGAGCTTCACCGGCTCGACGGAGGTCGGCCGGCTGGTGATGGAGG
CGGCGGCGAAGAGCAACCTGAAGCCCGTCTCGCTCGAGCTGGGTGGCAAGTCTCCGGTCA
TCGTGTTCGACGACGCCGACCTCGACACGGCCGTGAACCTGGTCCACATGGCCTCCTACA
CCAACAAGGGTGAGATCTGCGTCGCCGGCTCGCGAATCTATGTCCAGGAGGGGATCTACG
ATGCGTTCGTGAAGAAGGCGACCGAGATGGCCAAGAAATCGGTGGTCGGAGATCCGTTCA
ACCCGCGAGTTCATCAAGGCCCTCAGATTGACAAGGAGCAATACGAGAAGATCCTCAAGT
ACATCGACATCGGTAAGCGCGAAGGCGCGACGTTGGTCACCGGAGGGAAGCCCTGCGGCG
AAAACGGGTACTACATCGAGCCCACCATCTTCACGGACGTCAAGGAAGAAATGTCGATCG
CGCAAGAGGAAATCTTCGGGCCGGTGATGGCCCTCATGAAATTCAAGACGGTTGAGGAGG
CGATCCAGAAGGCGAACAGCACCCGGTACGGCCTGGCTGCCGGCATAGTCACCAAGAACA
TCGACGTCGCGAACACGGTTTCGCGGTCGATCCGGGCAGGGGCAATCTGGATCAATTGCT
ACCTCGGCTTCGACCCCGACGTGCCGTTCGGGGGGTACAAGATGAGCGGCTTCGGCAAGG
ACATGGGCATGGACGCCCTTGAGAAGTACCTCCACACCAAGGCGGTGGTCACCCCTCTCT
ACAACACCCCTTGGCTATGATCTGATGATGAACAGCACAGAAAGATTAATTACAGTGGAA
AAAAATAACATTTCTATATATACAGCTGAAAGGTTGGGTTATATTTGTGGTTAGTTGATT
GCTTGTATCAAATATCAATTTGTCGGAATAAAGACAGTATATTTCAGTT