Gene sequences

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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os01t0590900-01
CDS Infomation	cds chromosome:IRGSP-1.0:1:23090754:23095161:1 gene:Os01g0590900 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Serine/threonine-protein kinase AFC3. (Os01t0590900-01)
Sequence	ATGGAGTCGTCGCGGTCGCGGAAGCGGGCCCGCCAGGACTGGGACGGCGCCGGCGCGCCG CCGCCGCCGGCGGAGCGGGCGGTGGTGGCGAGGGGCGGCGCGTCGCCGCCGTGGAGGGAC GACGACCGCGACGGGCACTACGTGTTCGACCTCGGCGAGAACTTGAACCGACGATACAAA ATCTTGAGCAAAATGGGAGAAGGTACTTTTGGGCGTGTTTTGGAATGCTGGGACCGTGAA ACACATGAATATGTCGCAATAAAAGTTGTTCGTAGCATCCGCAAGTACAGGGATGCTGCA ATGATTGAGATCGATGTGCTCAACCGCCTTGCAGAAAATGAGAGATACAGATCACTCTGT GTCCAGATTCAAGGATGGTTTGACTATCGCAATCATATATGCATTGTTTTTGAGAAGCTT GGGCCAAGCTTGTATGATTTTCTAAAGAGAAATAGATACCAACCTTTCCCTGTGGAACTT GTGCGGGAGTTTGGACGGCAACTGTTGGAATCTGTAGCATATATGCATGAATTACGCCTT ATTCACACTGATCTGAAGCCAGAAAACATACTCCTTGTGTCTTCGGAGTATATAAGGGTT CCAGGTTCCAAGAAGAATTCACAAGATGAGATGCATTTCAAGTGCTTACCAAAGTCCAGT GCCATAAAGCTGATAGATTTTGGTAGTACCGCCTTTGATAATCAGGAACATAGCTCGATT GTTTCTACAAGGCATTACAGAGCACCTGAAATAATCTTAGGCTTAGGGTGGAGTTTCCCT TGTGACCTTTGGAGTGTCGGATGCATCATTGTTGAGCTATGCTCGGGGGAAGCATTGTTT CAAACACATGAGAACCTTGAGCACTTAGCAATGATGGAGAGGGTTTTGGGTCCACTCCCA GAACACATGATAAGGAAAGCCAGTTCATCAGCTCAGAAATATTTTAGACGAGGAGCGCGT CTAAATTGGCCTGAAGGTGCTGTTTCAAGAGAGAGTATCAGAGCAGTCAAAAAACTAGAT CGGCTAAAGGACTTAGTGGCGAGGAAGGCTGATCATTCAAGGGCGGTGCTGGCAGACTTG TTATATGGGCTTTTAAAATTTGAGCCATCAGAGCGTCTTACTGCCCAAGAAGCTCTAGAC CATCCATTTTTCAGAAATACAACATGA

Peptide Sequence

PEP ID	Os01t0590900-01
PEP Infomation	pep chromosome:IRGSP-1.0:1:23090754:23095161:1 gene:Os01g0590900 transcript:Os01t0590900-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Serine/threonine-protein kinase AFC3. (Os01t0590900-01)
Sequence	MESSRSRKRARQDWDGAGAPPPPAERAVVARGGASPPWRDDDRDGHYVFDLGENLNRRYK ILSKMGEGTFGRVLECWDRETHEYVAIKVVRSIRKYRDAAMIEIDVLNRLAENERYRSLC VQIQGWFDYRNHICIVFEKLGPSLYDFLKRNRYQPFPVELVREFGRQLLESVAYMHELRL IHTDLKPENILLVSSEYIRVPGSKKNSQDEMHFKCLPKSSAIKLIDFGSTAFDNQEHSSI VSTRHYRAPEIILGLGWSFPCDLWSVGCIIVELCSGEALFQTHENLEHLAMMERVLGPLP EHMIRKASSSAQKYFRRGARLNWPEGAVSRESIRAVKKLDRLKDLVARKADHSRAVLADL LYGLLKFEPSERLTAQEALDHPFFRNTT

Transcript Sequence

Transcript ID	Os01t0590900-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:1:23090754:23095161:1 gene:Os01g0590900 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Serine/threonine-protein kinase AFC3. (Os01t0590900-01)
Sequence	GGGTTTCTCTCTCTCTCTCTCTCTCCTCTCTCTCTCTCTCCTCTCTCTCCAATCGAATCG GAATCCATGGAGTCGTCGCGGTCGCGGAAGCGGGCCCGCCAGGACTGGGACGGCGCCGGC GCGCCGCCGCCGCCGGCGGAGCGGGCGGTGGTGGCGAGGGGCGGCGCGTCGCCGCCGTGG AGGGACGACGACCGCGACGGGCACTACGTGTTCGACCTCGGCGAGAACTTGAACCGACGA TACAAAATCTTGAGCAAAATGGGAGAAGGTACTTTTGGGCGTGTTTTGGAATGCTGGGAC CGTGAAACACATGAATATGTCGCAATAAAAGTTGTTCGTAGCATCCGCAAGTACAGGGAT GCTGCAATGATTGAGATCGATGTGCTCAACCGCCTTGCAGAAAATGAGAGATACAGATCA CTCTGTGTCCAGATTCAAGGATGGTTTGACTATCGCAATCATATATGCATTGTTTTTGAG AAGCTTGGGCCAAGCTTGTATGATTTTCTAAAGAGAAATAGATACCAACCTTTCCCTGTG GAACTTGTGCGGGAGTTTGGACGGCAACTGTTGGAATCTGTAGCATATATGCATGAATTA CGCCTTATTCACACTGATCTGAAGCCAGAAAACATACTCCTTGTGTCTTCGGAGTATATA AGGGTTCCAGGTTCCAAGAAGAATTCACAAGATGAGATGCATTTCAAGTGCTTACCAAAG TCCAGTGCCATAAAGCTGATAGATTTTGGTAGTACCGCCTTTGATAATCAGGAACATAGC TCGATTGTTTCTACAAGGCATTACAGAGCACCTGAAATAATCTTAGGCTTAGGGTGGAGT TTCCCTTGTGACCTTTGGAGTGTCGGATGCATCATTGTTGAGCTATGCTCGGGGGAAGCA TTGTTTCAAACACATGAGAACCTTGAGCACTTAGCAATGATGGAGAGGGTTTTGGGTCCA CTCCCAGAACACATGATAAGGAAAGCCAGTTCATCAGCTCAGAAATATTTTAGACGAGGA GCGCGTCTAAATTGGCCTGAAGGTGCTGTTTCAAGAGAGAGTATCAGAGCAGTCAAAAAA CTAGATCGGCTAAAGGACTTAGTGGCGAGGAAGGCTGATCATTCAAGGGCGGTGCTGGCA GACTTGTTATATGGGCTTTTAAAATTTGAGCCATCAGAGCGTCTTACTGCCCAAGAAGCT CTAGACCATCCATTTTTCAGAAATACAACATGAGTACATGATCATGCTGACTCTACCCCT CCCAATATGTACGTGAAGAACCCAAGCCTGGAGAAAGCAGGCGCAAGGACATTCCCATAT AAAGCAGAATGCCTTCAGCTCATCTGTACCATAAATCTTCTGTAAGCTGAGCTATAATGC TTGTGGTGGTGACACGGCATAACTGTTACGTTCACCCGATGTAATGTACAATAGCATTGA ATCTAGGGAAGGTTGATGTAGCAGATGGAACTTGTGCATTGTGAGTTGTGTGATACATGA GGAATTGCATTGCGACTCATGTCGCAGTGACACAACAATGACCAAAGCAGGCCATATATG CCCCTTCC