Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os01t0590200-01
CDS Infomation

cds chromosome:IRGSP-1.0:1:23023170:23026116:-1 gene:Os01g0590200 gene_biotype:protein_coding transcript_biotype:protein_coding description:Conserved hypothetical protein. (Os01t0590200-01)
Sequence

ATGGCTTCGTCGCCGGAGAAGAAGGATCCTCCTAGTTGTGGCTCTCGGGATTCCCAGCCC
ATCCCTTGCACGGACGATCCCCCCTTGTCTGAATCCCCAACGACGGACCTAGGCTGCCAC
GATCCGCGCGACGAGGACGCCGACCACCCGGCACCACCCATGGGCAAAGGTGACATCGAC
GAGGATAGTGATGATGATGGTTACGCAGACGAGGAGACAACTTGCCCAGGGCAGAACTTC
ACGAAGGAGCAGGCAAAGGAAATAATTCGCAAGTGGCTAGAAACATACGACAAGAGGAAT
AGAGAATTCATGGTGGCGTGCGAGGAGTTCCAAAAGCAGGGAGGGGATGAGACGAGTGCT
TCTTGTCCAGTATTTCCTTTGAAACCGCTCCCGGAGACAACAGATTTCTGTACCACCAAG
AGTTTGTGCTATCACCGTGAATACAAGACCAATGATACTTCTGAGACTGCATCTACTATT
GGGTGGCTTGAACCCAAGGAGATGCTCCAGATCTTCTCTTTGAGGTTGTCCAGCTCCATG
TCCTATCCTATTAGTGTTTACGGAATCTTTGCAGTACGTGATTACTTGGACCCTTTGAGG
AATTATGTCTTCAACCGTACCAGAGATGATCCTGTCATAGTTGAACAGGATTCCTTCACA
TTACCTCTTTGCAGCCCTTGTCGAGGAATGTATGTAGTAGAATATGCATTGTTTGAGGTT
GATCTTTGGGTGAAAATGGAAGGTGGAGTATCTAATGACAAGCAATTAGTATCCGCGTAT
GTCGAGATTTTTGCCCGTGGCGTGTTTAATAAGGAGATAAGGGGGCGGATATTAAGCGAC
CATTGCTATCTGGACATACACTATATGTATCTTTCACAGAGTATTGAAGCTGTCATACAA
GTATCCACAGAGATTGACAGTAACGATCCTCGTCATGTGAGATTCACTGCATTTTGTAGT
GGCTTTGACCGTGAGATTTTGCTGTTCAATGGGAAATTCTGCAAGGACAAGTCTTTCCAG
CACATTGTGGCAATGAAGTCCAAGGGAAAACTGGTTGTTCACTTGGAGTTTGAGGGATCC
CTGTTTTGCTGGACTTTTAACAATGGTGAGCTTGGAGCTGTTAATTCTCCCGATGATTCA
GTCCTGAAGCAATTTCATGTCAGGGTGTTGTTTTCTCCAAAATAA

Peptide Sequence

PEP ID

Os01t0590200-01
PEP Infomation

pep chromosome:IRGSP-1.0:1:23023170:23026116:-1 gene:Os01g0590200 transcript:Os01t0590200-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Conserved hypothetical protein. (Os01t0590200-01)
Sequence

MASSPEKKDPPSCGSRDSQPIPCTDDPPLSESPTTDLGCHDPRDEDADHPAPPMGKGDID
EDSDDDGYADEETTCPGQNFTKEQAKEIIRKWLETYDKRNREFMVACEEFQKQGGDETSA
SCPVFPLKPLPETTDFCTTKSLCYHREYKTNDTSETASTIGWLEPKEMLQIFSLRLSSSM
SYPISVYGIFAVRDYLDPLRNYVFNRTRDDPVIVEQDSFTLPLCSPCRGMYVVEYALFEV
DLWVKMEGGVSNDKQLVSAYVEIFARGVFNKEIRGRILSDHCYLDIHYMYLSQSIEAVIQ
VSTEIDSNDPRHVRFTAFCSGFDREILLFNGKFCKDKSFQHIVAMKSKGKLVVHLEFEGS
LFCWTFNNGELGAVNSPDDSVLKQFHVRVLFSPK

Transcript Sequence

Transcript ID

Os01t0590200-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:1:23023170:23026116:-1 gene:Os01g0590200 gene_biotype:protein_coding transcript_biotype:protein_coding description:Conserved hypothetical protein. (Os01t0590200-01)
Sequence

GATTTAGGGTTCCAGGCCGCCGCCCTCCGCCAGCAGTTCCCTGACCGGCGCCGCGACTTC
TCCGGGCCAGTGGAACGAAGTTGCCGCATCGGCGTCCCCTGCATCCCACCGCATCGAGAA
GGGACAGGGTTGCTGAGAGCAGCAGCGCCACCAGCCCAACCGTGGTGATGGCTTCGTCGC
CGGAGAAGAAGGATCCTCCTAGTTGTGGCTCTCGGGATTCCCAGCCCATCCCTTGCACGG
ACGATCCCCCCTTGTCTGAATCCCCAACGACGGACCTAGGCTGCCACGATCCGCGCGACG
AGGACGCCGACCACCCGGCACCACCCATGGGCAAAGGTGACATCGACGAGGATAGTGATG
ATGATGGTTACGCAGACGAGGAGACAACTTGCCCAGGGCAGAACTTCACGAAGGAGCAGG
CAAAGGAAATAATTCGCAAGTGGCTAGAAACATACGACAAGAGGAATAGAGAATTCATGG
TGGCGTGCGAGGAGTTCCAAAAGCAGGGAGGGGATGAGACGAGTGCTTCTTGTCCAGTAT
TTCCTTTGAAACCGCTCCCGGAGACAACAGATTTCTGTACCACCAAGAGTTTGTGCTATC
ACCGTGAATACAAGACCAATGATACTTCTGAGACTGCATCTACTATTGGGTGGCTTGAAC
CCAAGGAGATGCTCCAGATCTTCTCTTTGAGGTTGTCCAGCTCCATGTCCTATCCTATTA
GTGTTTACGGAATCTTTGCAGTACGTGATTACTTGGACCCTTTGAGGAATTATGTCTTCA
ACCGTACCAGAGATGATCCTGTCATAGTTGAACAGGATTCCTTCACATTACCTCTTTGCA
GCCCTTGTCGAGGAATGTATGTAGTAGAATATGCATTGTTTGAGGTTGATCTTTGGGTGA
AAATGGAAGGTGGAGTATCTAATGACAAGCAATTAGTATCCGCGTATGTCGAGATTTTTG
CCCGTGGCGTGTTTAATAAGGAGATAAGGGGGCGGATATTAAGCGACCATTGCTATCTGG
ACATACACTATATGTATCTTTCACAGAGTATTGAAGCTGTCATACAAGTATCCACAGAGA
TTGACAGTAACGATCCTCGTCATGTGAGATTCACTGCATTTTGTAGTGGCTTTGACCGTG
AGATTTTGCTGTTCAATGGGAAATTCTGCAAGGACAAGTCTTTCCAGCACATTGTGGCAA
TGAAGTCCAAGGGAAAACTGGTTGTTCACTTGGAGTTTGAGGGATCCCTGTTTTGCTGGA
CTTTTAACAATGGTGAGCTTGGAGCTGTTAATTCTCCCGATGATTCAGTCCTGAAGCAAT
TTCATGTCAGGGTGTTGTTTTCTCCAAAATAATGTGTACCAGCCTATAATAGCTTCTTTG
GGTGAAGGAGAGGAAGTAAATCAGTATAAAAAGCTTGATACAATGTAGTGCTTGTGTTAA
GATGCTTATCTGGGTAATAAACTAGACCAGTACTTGCATTCAGATTTGCAAATTGCATCC
AGGGCCGAGATTGTTGGAGGCACTGTTCACAAGGAGGCTTAATCTTTGAAACCTGGATGG
GATGTCCATCCATCATTGTGCTCTAGCCTCTAATCCAAACATTGATGGATTGTACACAAT
TTGTGCTTTATGGGCTTAATTTTACCTCCATTCTCTCGCCC