Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os01t0589700-01
CDS Infomation

cds chromosome:IRGSP-1.0:1:23000088:23002368:1 gene:Os01g0589700 gene_biotype:protein_coding transcript_biotype:protein_coding description:Conserved hypothetical protein. (Os01t0589700-01)
Sequence

GCAGTGAAAATGCTGCTGGCTGTGGAAGGAGGGGGCTTTTTCTCGTCGTCGGCTTCAGGG
TACAGCCATGGCCTTGCCCTTCTGCTTCTTGGGAGGAAAGATGAAGAGAAGCCTGTCAAG
GTATCCCCGTGGAATCAGTACCGACTAGTCGACCGGGAAGCTGAGCAGGTGTATCATCTG
GCTTCCAGGAAAGACCAAGCTCCTGGTAAATGTGCCCCGTTTATCTGCTTTGGCCGTGCA
GCTGCTGGGCTTGAGGGGGCGTCTCCTCCAAAACTGAGTTCAGGCAATACATCAGGGAGT
TCGTCAGAAGAGTCGTCTGCTTCAGCAAACGAAGGAACTAATGGTTCGTTAACTGGAAAT
GAGAAAAAAGGTTGCCTTAAGAGCAACTCAAGAAGGGATTCCTTAGAGCACTGTATAGTG
GTAAGTGAAGGTGAAGAGCCACGAGAGTCACTGGAAGAGGTCCAAACCTTGAAATCTGGC
ATGGAACGAAGAAAAGTTCAATGGACTGATACGTGTGGAAAAGAGCTTTTTGAGATAAGG
GAATTTGAAGCTAGTGATGAAGGTTTGTCAGACGATGATACGGAAAATGAGGGTTTCAGG
AAATGTGAGTGTGTGATTCAGTAG

Peptide Sequence

PEP ID

Os01t0589700-01
PEP Infomation

pep chromosome:IRGSP-1.0:1:23000088:23002368:1 gene:Os01g0589700 transcript:Os01t0589700-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Conserved hypothetical protein. (Os01t0589700-01)
Sequence

AVKMLLAVEGGGFFSSSASGYSHGLALLLLGRKDEEKPVKVSPWNQYRLVDREAEQVYHL
ASRKDQAPGKCAPFICFGRAAAGLEGASPPKLSSGNTSGSSSEESSASANEGTNGSLTGN
EKKGCLKSNSRRDSLEHCIVVSEGEEPRESLEEVQTLKSGMERRKVQWTDTCGKELFEIR
EFEASDEGLSDDDTENEGFRKCECVIQ

Transcript Sequence

Transcript ID

Os01t0589700-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:1:23000088:23002368:1 gene:Os01g0589700 gene_biotype:protein_coding transcript_biotype:protein_coding description:Conserved hypothetical protein. (Os01t0589700-01)
Sequence

CTCCCCACTCTCTCTCGCCAACCTTCTCTCTCCCGATCTGCGCCGCCGCCGCAGCCGCCG
CCATCCCACCGCCGGACTCCGGCGAAGCAGGCCCCCCCCCGGAGCCACCCCACAGCGCAT
TCCACCTCCCCTCCCCTCCTTCCTTCCCCGTCGCGCGCGCGCGCGAAGCTGGTCTCTAGG
AGGGGGGCGACTTTAGCCTGCCTCTCCCCCCACACCCAATCCTCGACTCGGATCAAGCTG
AAGTGTGCTAGATGATGAAGAGGAGGTGCCTCAAGCAGACCACGATATTGTAGCTTATGG
TTCCTTGATGAGCAGTGAAAATGCTGCTGGCTGTGGAAGGAGGGGGCTTTTTCTCGTCGT
CGGCTTCAGGGTACAGCCATGGCCTTGCCCTTCTGCTTCTTGGGAGGAAAGATGAAGAGA
AGCCTGTCAAGGTATCCCCGTGGAATCAGTACCGACTAGTCGACCGGGAAGCTGAGCAGG
TGTATCATCTGGCTTCCAGGAAAGACCAAGCTCCTGGTAAATGTGCCCCGTTTATCTGCT
TTGGCCGTGCAGCTGCTGGGCTTGAGGGGGCGTCTCCTCCAAAACTGAGTTCAGGCAATA
CATCAGGGAGTTCGTCAGAAGAGTCGTCTGCTTCAGCAAACGAAGGAACTAATGGTTCGT
TAACTGGAAATGAGAAAAAAGGTTGCCTTAAGAGCAACTCAAGAAGGGATTCCTTAGAGC
ACTGTATAGTGGTAAGTGAAGGTGAAGAGCCACGAGAGTCACTGGAAGAGGTCCAAACCT
TGAAATCTGGCATGGAACGAAGAAAAGTTCAATGGACTGATACGTGTGGAAAAGAGCTTT
TTGAGATAAGGGAATTTGAAGCTAGTGATGAAGGTTTGTCAGACGATGATACGGAAAATG
AGGGTTTCAGGAAATGTGAGTGTGTGATTCAGTAGGTTTAATGCCTGTACATTGCGGCAA
TGGAATCGATGCTTCTCGTGTAGCTGAAGTTTTGCTGGCTAGATATGCTTGCGCTGGTGA
TTTCTCATCGATCAGGGTAAGATACCTGTGGATTCAAGACAAGGAGTCATGGTTGATCTT
ATGCCTTTTGCTGAATTATTTGCTGGTGACATGGTGGTTGTGTTTAGCTAATCTGCACAC
GTTAGGGTTACAGTTTTGATTCCCCACTGTACCATATCAAGATCTTAACTGCTCAATTTC
TTGTTTTCGCCTTTCTTTCCCTTCACTTTGGTGCTCTCAAGTTCCAATGTACTATTTCCG
TACAAGTCTGTCCAGTTAGTGTTGTAAGGGATGTTGGATCTCTACTATATTGTTTTGCTT
C