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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os01t0588900-01
CDS Infomation

cds chromosome:IRGSP-1.0:1:22955070:22959148:-1 gene:Os01g0588900 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:LONELY GUY 1 description:Cytokinin-activating enzyme, Bioactive cytokinin synthesis (Os01t0588900-01);Similar to carboxy-lyase. (Os01t0588900-02)
Sequence

ATGGCAATGGAGGCTGCGGCGGAGAGGAGCGCCGGAGCAGGGGCGGCGGCGACGGCGGCG
CCGGAGAGCGGTGGCGGTGGTGCAGGGGAGAGGCGGTCGCGGTTCAGGCGGATCTGCGTG
TACTGCGGCAGCGCCAAGGGGAGGAAGGCCAGCTACCAGGACGCCGCCGTCGAGCTCGGC
AAGGAACTGGTCGAGAGGGGCATAGACCTGGTCTACGGCGGTGGCTCCATCGGCCTCATG
GGCCTCGTCTCCCACGCTGTTCACGACGGTGGTCGCCATGTCATTGGGGTCATCCCGAAA
TCCTTGATGCCCAGAGAGGTCACTGGTGAGCCTGTTGGTGAAGTTAGAGCGGTCTCTGGC
ATGCACGAGAGGAAGGCTGAAATGGCCCGGTTTGCTGATGCGTTCATTGCACTGCCTGGC
GGCTACGGGACTCTTGAGGAGTTGCTTGAGGTCATCACCTGGGCCCAACTAGGAATCCAC
AAGAAGCCGGTTGGCCTTCTGAATGTCGACGGGTTTTATGATCCTTTTCTATCCTTCATT
GACATGGCTGTCAGCGAAGGATTCATAGCGGAGGATGCGCGGCGCATTATCATCTCGGCT
CCAACTGCCAGGGAGCTAGTTCTGAAGCTTGAGGAGTATGTTCCCGAGTACGAGGTCGGC
TTGGTTTGGGACGATCAGATGCCGCACAGCTTCGCGCCTGACCTCGAGACCAGGATCACC
TCATCCTGA

Peptide Sequence

PEP ID

Os01t0588900-01
PEP Infomation

pep chromosome:IRGSP-1.0:1:22955070:22959148:-1 gene:Os01g0588900 transcript:Os01t0588900-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:LONELY GUY 1 description:Cytokinin-activating enzyme, Bioactive cytokinin synthesis (Os01t0588900-01);Similar to carboxy-lyase. (Os01t0588900-02)
Sequence

MAMEAAAERSAGAGAAATAAPESGGGGAGERRSRFRRICVYCGSAKGRKASYQDAAVELG
KELVERGIDLVYGGGSIGLMGLVSHAVHDGGRHVIGVIPKSLMPREVTGEPVGEVRAVSG
MHERKAEMARFADAFIALPGGYGTLEELLEVITWAQLGIHKKPVGLLNVDGFYDPFLSFI
DMAVSEGFIAEDARRIIISAPTARELVLKLEEYVPEYEVGLVWDDQMPHSFAPDLETRIT
SS

Transcript Sequence

Transcript ID

Os01t0588900-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:1:22955070:22959148:-1 gene:Os01g0588900 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:LONELY GUY 1 description:Cytokinin-activating enzyme, Bioactive cytokinin synthesis (Os01t0588900-01);Similar to carboxy-lyase. (Os01t0588900-02)
Sequence

GCCTCAACTCAAGCAAAAGCCTCCCCCTCCAATTCAATTTCCTCTCTCTCCATCTCTCTC
CTCCAATCGCTGCCTCGCTCACGCACGCGCGCTCTACCTACCTGAGGGCGAGGCTGGTGC
CGATGGCAATGGAGGCTGCGGCGGAGAGGAGCGCCGGAGCAGGGGCGGCGGCGACGGCGG
CGCCGGAGAGCGGTGGCGGTGGTGCAGGGGAGAGGCGGTCGCGGTTCAGGCGGATCTGCG
TGTACTGCGGCAGCGCCAAGGGGAGGAAGGCCAGCTACCAGGACGCCGCCGTCGAGCTCG
GCAAGGAACTGGTCGAGAGGGGCATAGACCTGGTCTACGGCGGTGGCTCCATCGGCCTCA
TGGGCCTCGTCTCCCACGCTGTTCACGACGGTGGTCGCCATGTCATTGGGGTCATCCCGA
AATCCTTGATGCCCAGAGAGGTCACTGGTGAGCCTGTTGGTGAAGTTAGAGCGGTCTCTG
GCATGCACGAGAGGAAGGCTGAAATGGCCCGGTTTGCTGATGCGTTCATTGCACTGCCTG
GCGGCTACGGGACTCTTGAGGAGTTGCTTGAGGTCATCACCTGGGCCCAACTAGGAATCC
ACAAGAAGCCGGTTGGCCTTCTGAATGTCGACGGGTTTTATGATCCTTTTCTATCCTTCA
TTGACATGGCTGTCAGCGAAGGATTCATAGCGGAGGATGCGCGGCGCATTATCATCTCGG
CTCCAACTGCCAGGGAGCTAGTTCTGAAGCTTGAGGAGTATGTTCCCGAGTACGAGGTCG
GCTTGGTTTGGGACGATCAGATGCCGCACAGCTTCGCGCCTGACCTCGAGACCAGGATCA
CCTCATCCTGATCTCTCGGCTCTGGCCCTATTCTTACCCAAGCTTCTAACCGGCGGACGA
CGATACCTTCTTCTCGTGCCGAAGCCGAATATGATCCTGGAGGAAGTTTGTTTTTCTCAG
CCAGGGGAAAGTAACATCCACTAACCGAAAAGATTTAGCCAAAGGCGGCCCCTAGCTCGG
GTCTGCCGATTTGTTGTTTTGGCAAAATATGTCAATTGGGACAGTATTTAGCATTAGCAG
TGCCTCCTCAATGCTGTTCTTTTGGCCCCCCTCCCTCCTCACTAGCTAGAAGAAGGAATA
TATGTATATGCAAGTAATATTAGTAGCATCTGTCTATCTTGATCTTCTCC