Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os01t0588400-01
CDS Infomation

cds chromosome:IRGSP-1.0:1:22914602:22916173:-1 gene:Os01g0588400 gene_biotype:protein_coding transcript_biotype:protein_coding description:Band 7 protein family protein. (Os01t0588400-01)
Sequence

ATGGGCGGGGTGACGTCGTCGACGTCGTCGTCGTCTCCGGCGACGGCGGCGGGGGGCAGC
AGCTACTCGGCGGAGGCGGCGCAGGCGCTGTGCTGCGCGTGCGTGGGGCAGTCAACGGTG
GCGGTGGAGGAGGCGTGGGGGAGGTACGACGCGGTGCTGGGGCCCGGGTGCCACTTCGTG
CCGTGGTGCGTCGGCCGCCGCGTCGCCGGCTACCTCTCCCTCCGCGTCCAGCAGCTCGAC
GTCCGCTGCGAGACCAAGACCAGGGACAACGTCTTCGTCACCGTCGTCGCCTCCGTCCAG
TACCGCGCCCTCGCCGACAGGGCCTACGACGCCTTCTACTGCCTCACCAACGCCCACGCC
CAGATCCAGTCCTACGTCTTCGACGTGATCAGGGCGAGCGTGCCGAACATGAACCTGGAC
GAGGTGTTCGGGCAGAAGAAGGAGGTGGCGCGGGCGGTGGAGGAGGAGCTGGCGAGGGCG
ATGACCATGTACGGGTACGAGATCGTGCAGACGCTGATCGTGGACATCGTCCCCGACGAG
GTGGTGCGGCGCGCCATGAACGACATCAACGCGGCGGCGCGGCTGCGCGTGGCGGCGGCG
GAGCGCGCCGAGGCCGACAAGATCCAGCAGGTGAAGCGCGCCGAGGGGGAGGCCGAGGCC
AAGTACCTCGCCGGCGTCGGCGTGGCCCGGCAGCGCCAGGCCATCGTCGAGGGCCTCAAG
CGCTTCGTCCCCAACGAGAAGGACGTCATGGACATGGTGCTCGTCACCCAGTACTTCGAC
ACCATCCGCGACATCGGCGCCACCTCCAGGTCCTCCACCGTCTTCATCCCCCACGGCCCC
AGCGCCGTCCGCGACATGGCCGCGCAGGTCCGCGACGGCCTCCTCCAGGCCACCGCCGCC
GCCGGAGGAGGAGCAGCCACCCTCAAGGCATTATAG

Peptide Sequence

PEP ID

Os01t0588400-01
PEP Infomation

pep chromosome:IRGSP-1.0:1:22914602:22916173:-1 gene:Os01g0588400 transcript:Os01t0588400-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Band 7 protein family protein. (Os01t0588400-01)
Sequence

MGGVTSSTSSSSPATAAGGSSYSAEAAQALCCACVGQSTVAVEEAWGRYDAVLGPGCHFV
PWCVGRRVAGYLSLRVQQLDVRCETKTRDNVFVTVVASVQYRALADRAYDAFYCLTNAHA
QIQSYVFDVIRASVPNMNLDEVFGQKKEVARAVEEELARAMTMYGYEIVQTLIVDIVPDE
VVRRAMNDINAAARLRVAAAERAEADKIQQVKRAEGEAEAKYLAGVGVARQRQAIVEGLK
RFVPNEKDVMDMVLVTQYFDTIRDIGATSRSSTVFIPHGPSAVRDMAAQVRDGLLQATAA
AGGGAATLKAL

Transcript Sequence

Transcript ID

Os01t0588400-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:1:22914602:22916173:-1 gene:Os01g0588400 gene_biotype:protein_coding transcript_biotype:protein_coding description:Band 7 protein family protein. (Os01t0588400-01)
Sequence

AGTCAAACTCTGCTCTTCTCTTCTTGCATGCCCATAAACACACTCCGAAAGTACATAATC
TAAGCTAGCTTTGCAAGATCAGGAACAAGGGGACCAAATTAAGATGGGCGGGGTGACGTC
GTCGACGTCGTCGTCGTCTCCGGCGACGGCGGCGGGGGGCAGCAGCTACTCGGCGGAGGC
GGCGCAGGCGCTGTGCTGCGCGTGCGTGGGGCAGTCAACGGTGGCGGTGGAGGAGGCGTG
GGGGAGGTACGACGCGGTGCTGGGGCCCGGGTGCCACTTCGTGCCGTGGTGCGTCGGCCG
CCGCGTCGCCGGCTACCTCTCCCTCCGCGTCCAGCAGCTCGACGTCCGCTGCGAGACCAA
GACCAGGGACAACGTCTTCGTCACCGTCGTCGCCTCCGTCCAGTACCGCGCCCTCGCCGA
CAGGGCCTACGACGCCTTCTACTGCCTCACCAACGCCCACGCCCAGATCCAGTCCTACGT
CTTCGACGTGATCAGGGCGAGCGTGCCGAACATGAACCTGGACGAGGTGTTCGGGCAGAA
GAAGGAGGTGGCGCGGGCGGTGGAGGAGGAGCTGGCGAGGGCGATGACCATGTACGGGTA
CGAGATCGTGCAGACGCTGATCGTGGACATCGTCCCCGACGAGGTGGTGCGGCGCGCCAT
GAACGACATCAACGCGGCGGCGCGGCTGCGCGTGGCGGCGGCGGAGCGCGCCGAGGCCGA
CAAGATCCAGCAGGTGAAGCGCGCCGAGGGGGAGGCCGAGGCCAAGTACCTCGCCGGCGT
CGGCGTGGCCCGGCAGCGCCAGGCCATCGTCGAGGGCCTCAAGCGCTTCGTCCCCAACGA
GAAGGACGTCATGGACATGGTGCTCGTCACCCAGTACTTCGACACCATCCGCGACATCGG
CGCCACCTCCAGGTCCTCCACCGTCTTCATCCCCCACGGCCCCAGCGCCGTCCGCGACAT
GGCCGCGCAGGTCCGCGACGGCCTCCTCCAGGCCACCGCCGCCGCCGGAGGAGGAGCAGC
CACCCTCAAGGCATTATAGTAGGTTCCTAAAACCGGCAGCGCGCGCCGCCGCCATGTTCT
TTTGTACCTGCAATTTTTGTGTGTGCTTTGCTTGTTGCAATCCTATTAATACTCTCTGAT
TTCTGTGGGTATGTATTGGACGTTCTAGTTCGTGT