Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os01t0588100-00
CDS Infomation

cds chromosome:IRGSP-1.0:1:22906348:22907811:1 gene:Os01g0588100 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Hypersensitive-induced response protein. (Os01t0588100-00)
Sequence

ATGGGCAACCTGTTGTGCTGCGTGGAGGTGGAGGAGTCGACGGTGGCGATGCGGGAGCGG
TTTGGTAAGTTCGACGGCGTCATGGAGCCTGGCTGCCACTTCGTGCCCTGGTTTCTTGGC
CTCCAGGCCCGCGGCCCCCTCTCCCTCCGCCTCCGTCAGCTCGAGATCCGCTGCCCGACC
AAGACCAAGGACAATGTGTATGTAACTATTGTTACGTGTGTTCAGTACCGTGCTCTAGCC
GACAAAGCGAGCCATGCGTTCTACACGCTCATCAACACCAGGTCACAGATCCAGGCTCAC
GTCTTCGATGTGCTGAGGACGAGCATACCGAAGCTGGCGCTGGAGGAGGTGTTCGACAAG
AAGAAGGAGATCGCGGAGGCGCTGGAGGAGGAGGTGGCGGAGGCCATGGCGCCGTACGGC
TACGAGGTGATGCGCGCGCTCGTCGTGGACGTGGAGCCCGAGGAGGCCGTGAGGCGCGCC
ATGGGCGAGAGCCGCGCCGCGGCCGACAGGGCGGTGGCGGAGCGGGCGGCGCGCGCCGGG
CGCGCCGAGGCCGACGCCGAGGCCGCGCGCCTCGCCGGCGTCGGCGCCGCGCGCCACCGC
CAGGCCGTCGTCGACGGGCTCAGGGCCTGCGTCGTCGCGTTCTGCGCCGCCGTCCCGGGC
GCCACGCCCAGGGAGGTCATGGACATGGTGCTCGTCGCGCAGTACTTGGACACCGTGAGG
GAGATCGCCGCCGCGTCCGCGTCCGGGTGCTCGGCGGCGGCGGCGGTGCCGTTCCTCCCG
CACGGCCCCGCCGCGGCGCGCGACGCCGTGGCGCAGATACGCGACGGGCTGCTCCAGGCC
GTGCAGCCTCCTGCCGCCGCCGCCGCCGCAAGCGTCGCCGCCGTTGGCCTTCCATTGCCA
TTGCCAGTCGCCAGCGTTTGCGAAGGTATCACAGAAGAGCAGTAG

Peptide Sequence

PEP ID

Os01t0588100-00
PEP Infomation

pep chromosome:IRGSP-1.0:1:22906348:22907811:1 gene:Os01g0588100 transcript:Os01t0588100-00 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Hypersensitive-induced response protein. (Os01t0588100-00)
Sequence

MGNLLCCVEVEESTVAMRERFGKFDGVMEPGCHFVPWFLGLQARGPLSLRLRQLEIRCPT
KTKDNVYVTIVTCVQYRALADKASHAFYTLINTRSQIQAHVFDVLRTSIPKLALEEVFDK
KKEIAEALEEEVAEAMAPYGYEVMRALVVDVEPEEAVRRAMGESRAAADRAVAERAARAG
RAEADAEAARLAGVGAARHRQAVVDGLRACVVAFCAAVPGATPREVMDMVLVAQYLDTVR
EIAAASASGCSAAAAVPFLPHGPAAARDAVAQIRDGLLQAVQPPAAAAAASVAAVGLPLP
LPVASVCEGITEEQ

Transcript Sequence

Transcript ID

Os01t0588100-00
Transcript Infomation

cdna chromosome:IRGSP-1.0:1:22906348:22907811:1 gene:Os01g0588100 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Hypersensitive-induced response protein. (Os01t0588100-00)
Sequence

AGGAAAGAGAAGGCATGGGCAACCTGTTGTGCTGCGTGGAGGTGGAGGAGTCGACGGTGG
CGATGCGGGAGCGGTTTGGTAAGTTCGACGGCGTCATGGAGCCTGGCTGCCACTTCGTGC
CCTGGTTTCTTGGCCTCCAGGCCCGCGGCCCCCTCTCCCTCCGCCTCCGTCAGCTCGAGA
TCCGCTGCCCGACCAAGACCAAGGACAATGTGTATGTAACTATTGTTACGTGTGTTCAGT
ACCGTGCTCTAGCCGACAAAGCGAGCCATGCGTTCTACACGCTCATCAACACCAGGTCAC
AGATCCAGGCTCACGTCTTCGATGTGCTGAGGACGAGCATACCGAAGCTGGCGCTGGAGG
AGGTGTTCGACAAGAAGAAGGAGATCGCGGAGGCGCTGGAGGAGGAGGTGGCGGAGGCCA
TGGCGCCGTACGGCTACGAGGTGATGCGCGCGCTCGTCGTGGACGTGGAGCCCGAGGAGG
CCGTGAGGCGCGCCATGGGCGAGAGCCGCGCCGCGGCCGACAGGGCGGTGGCGGAGCGGG
CGGCGCGCGCCGGGCGCGCCGAGGCCGACGCCGAGGCCGCGCGCCTCGCCGGCGTCGGCG
CCGCGCGCCACCGCCAGGCCGTCGTCGACGGGCTCAGGGCCTGCGTCGTCGCGTTCTGCG
CCGCCGTCCCGGGCGCCACGCCCAGGGAGGTCATGGACATGGTGCTCGTCGCGCAGTACT
TGGACACCGTGAGGGAGATCGCCGCCGCGTCCGCGTCCGGGTGCTCGGCGGCGGCGGCGG
TGCCGTTCCTCCCGCACGGCCCCGCCGCGGCGCGCGACGCCGTGGCGCAGATACGCGACG
GGCTGCTCCAGGCCGTGCAGCCTCCTGCCGCCGCCGCCGCCGCAAGCGTCGCCGCCGTTG
GCCTTCCATTGCCATTGCCAGTCGCCAGCGTTTGCGAAGGTATCACAGAAGAGCAGTAG