Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os01t0587300-00
CDS Infomation	cds chromosome:IRGSP-1.0:1:22868546:22871788:-1 gene:Os01g0587300 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to C2 domain-containing protein. (Os01t0587300-00)
Sequence	ATGGCGGCCGGTGCGCCCCCGCCGGAGTCTGGGCCGCCGCCGCCGGGGCCGCCGGGGGCG ATGCGGGTGGCGCGGAGGCTGGCGGTGGAGGTGGTGGACGCGCGGGACCTGGTGCCCAAG GACGGGCTCGGCACGTCGAGTGCCTTCGCCGTCGTGGACTTCGACGGGCAGCGGAAGCGG ACGCGCACCGTGCCGCGCGACCTCAGCCCGCAGTGGCACGAGCGGCTCGAGTTCGCCGTG CACGACCCGGCCGCCATGCACGCCGAGGCGCTCGACGTCTCGCTCTACCACGACCGCCGC TTCAACCCTTCCGGCGGCGGCGGCGGCGGTGGCGGGAAGAACCACTTCCTCGGCCGCGTG CGCATCTACGGGTCGCAGTTCTCGCGGCGAGGGGAGGAGGGGATCGTGTACTTCCCGCTC GAGAAGCGGAGCTTGCTCAGCTGGATCCGCGGCGAGGTTGGCCTCAAGATTTACTACTAC GACGAGGCGCCGCCGCCGCCGGAGGATAGGCCGCCGGAGGGTGGTGGTGGTGACAACGCG CCGCCGCCTGAGGTCCCGCCTGAGGCGCCCAGGGACCTCCCGGACATCCCCGCGCCGACC GAGGCCGCCGTCGAGGTGCAGCAGCCGCCGGTGCATCCCCCTGTCATCATCGTGGAAGAG GCGCCGCCGCCGATGCATCACCCGATGATGCCGCCGATGCACGGCCCGCACGGCCCGATG ATGCCGCCGGCGGTGCACGGGCCGCACGGGCCAATGGCGCCGCCGATGCATCAGCATCAG CATCCGCAGCCGCAGCCGGAGCCGGAGCCTGAACCGGAGCCGGACGGCGGCGAGGCGGGG TACCCGCCCGAGGTGCGCAAGACGCGGATGGCCACGGAGCGCGTCCGCATCGCGCGCCAC CTGAGCGGCGGGTTGGGGCCGGAGTACTACGCCACCTCGCCGCGCGTCATCTCCGGGCGG TTCGTGTCCACCGGCGACGCCGTCGAGCCGGTGCAGTCGTCGTACGACCTGGTGGAGCCG ATGCGCTACCTGTTCGTCCGCGTCGTGAAGGTGCGCGGCATCCGCGCCTGCGAGGGGCCG TACGTGAAGATCCAGGCCGGCCCGCACACGCTCCGGTCGCGCCCCGGCCGCGACGTCTCC GGCACCGGCAACCCGGAGTGGAACCAGGTGTTCGCCATCAACCACGCCAAGCCGGAGCCG ACGCTGGAGATATCCGTCTGGGACGGCGGCGCGCCGTCCCCGATCGAGGCCTTCCTCGGT GGCGTCTGCTTCGACCTCTCCGACGTGCCGGTCCGCGACCAGCCGGACGGCCCGCTGGCG CCGCAGTGGTACCGGCTCGAGGGCGGCGAGCCCGGCATGGTGACCGGCGACATCATGGTG GCGGTGTGGATCGGCACGCAGGCCGACGAGGCGTTCCCGGAGGCGTGGAACACCGACGCG CCGTACGCCGCGTACACGCGCTCCAAGGTGTACCAGTCGCCCAAGCTCTGGTACCTGCGC GCGTCGGTGATCGAGGCGCAGGACCTGCGCGTGCCGGCGCCGCCGCCGGGGCTGCCGTTC GACGTGCGCGTCAAGATCCAGGTCGGGTTCCAGTCGGCGAGGACGCGGCGGTCGGTGGCG AGCAGGAGCAGCGGCTCGGCGTTCGCGTGGGAGGAGGACCTCATGTTCGTCGTGTCCGAG CCGCTCGACGAGAGCCTCGTCGTCCTCGTCGAGGACCGCTCCATGATCAAGGAGCCGGCG CTGCTCGGACACGCCACCATCCCCGTCAACTCCGTCGAGCAGCGTCTCCACGAGCGGCAA CTCGTCGCGTCGAGGTGGTTCAGCCTCGAGGGTGGCACCTCCGACATCGGCATTGGTCCC GGCGGCGGCCCGCCGGGGTTCTACTCCGGCCGGCTTCACCTCCGTCTGTGCCTGGAAGGA GGGTACCACGTGCTCGACGAGGCGGCGCACGTGTGCAGCGACTACCGGCCGACGGCGAAG CAGCTGTGGAGGCCGCCGGTGGGCGTGCTGGAGCTGGGCATCATCGGGGCGTGCGGGCTG CTGCCGATGAAGACGAAGGGCGGCGCCAAGGGGTCGACGGACGCCTACTGCGTGGCCAAG TACGGCAAGAAGTGGGTGCGGACGCGCACCGTCACGGACAGCCTCAACCCGCGGTGGAAC GAGCAGTACACGTGGCAGGTGTACGACCCGTGCACGGTGCTCACGGTGGCGGTGTTCGAC AACTGGCGGATGTTCGCCTTCGCCGGCGCCGGGGACGAGCAGCGGCAGGACTACCGGATC GGGAAGGTGCGGGTGCGCGTGTCCACGCTGGAGAGCAACCGGGCGTACACGGCGTCGTAC CCGCTGCTCGTGCTGCTCCGGTCGGGGCTCAAGAAGATGGGGGAGGTGCAGCTCGCCGTG CGGTTCACGTCGCCGGCGCACCTGCCGGACACCTGGGCCACCTACACCTCGCCGCTGCTG CCGCGGATGCACTACCTCCGCCCGATCGGCGTCGCGCAGCAGGAGGCGCTGCGCGCCGCC GCCGTGCGCGTCGTCGCCGCGTGGCTGGAGCGGTCCGAGCCGCCGCTGGGGCGGGAGGTG GTGCGCCACATGCTCGACGTGGACGCGCACACGTGGAGCGTGCGGCGCGCCAAGGCGAAC TGGTTCCGCATCATGGGGGTGCTCGCCTGGGCCGTCGGGCTCGCGCGGTGGCTCGACAGC GTGCAGCGGTGGCGCAGCCCGCCCACCACCGTGCTCGTTCACGTCCTCTACCTCGTCCTC GTCTGGTACCCGGAGCTGGCCGTGCCCACGGCGTCGCTCTACGTCTTCCTCATCGGCGTC TGGTACTACCGGTTCCGGCCGCGCGGCCCCGCCGGCATGGACGCGCGGCTGTCGCAGGCC GACACGGTGGAGGCCGACGACCTGGAGGAGGAGTTCGACGCCGTGCCGCCGCCGGAGGTG CTCCGGGCGCGCTACGAGAGGCTGCGGACGCTGGCGGGGCGGGTGCAGCGCGTCATGGGC GACGTCGCGGCGCAGGGGGAGAGGGTGCAGGCGCTGGTGAGCTGGAGGGACCCGCGCGCC AGCCGGATCTTCGTCGGCGTCTGCCTCGCCGTCGCCGTCGCGCTGTACGCCATGCCGTCC AAGATGGTGGCCGTCGCCGGCGGGTTCTACTACCTCCGCCACCCGATGTTCCGGGACCCC ATGCCGCCGGCGGCCGTCAACTTCTTCCGGCGGCTGCCCAGCCTCTCCGACAGGATGCTC TGA

Peptide Sequence

PEP ID	Os01t0587300-00
PEP Infomation	pep chromosome:IRGSP-1.0:1:22868546:22871788:-1 gene:Os01g0587300 transcript:Os01t0587300-00 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to C2 domain-containing protein. (Os01t0587300-00)
Sequence	MAAGAPPPESGPPPPGPPGAMRVARRLAVEVVDARDLVPKDGLGTSSAFAVVDFDGQRKR TRTVPRDLSPQWHERLEFAVHDPAAMHAEALDVSLYHDRRFNPSGGGGGGGGKNHFLGRV RIYGSQFSRRGEEGIVYFPLEKRSLLSWIRGEVGLKIYYYDEAPPPPEDRPPEGGGGDNA PPPEVPPEAPRDLPDIPAPTEAAVEVQQPPVHPPVIIVEEAPPPMHHPMMPPMHGPHGPM MPPAVHGPHGPMAPPMHQHQHPQPQPEPEPEPEPDGGEAGYPPEVRKTRMATERVRIARH LSGGLGPEYYATSPRVISGRFVSTGDAVEPVQSSYDLVEPMRYLFVRVVKVRGIRACEGP YVKIQAGPHTLRSRPGRDVSGTGNPEWNQVFAINHAKPEPTLEISVWDGGAPSPIEAFLG GVCFDLSDVPVRDQPDGPLAPQWYRLEGGEPGMVTGDIMVAVWIGTQADEAFPEAWNTDA PYAAYTRSKVYQSPKLWYLRASVIEAQDLRVPAPPPGLPFDVRVKIQVGFQSARTRRSVA SRSSGSAFAWEEDLMFVVSEPLDESLVVLVEDRSMIKEPALLGHATIPVNSVEQRLHERQ LVASRWFSLEGGTSDIGIGPGGGPPGFYSGRLHLRLCLEGGYHVLDEAAHVCSDYRPTAK QLWRPPVGVLELGIIGACGLLPMKTKGGAKGSTDAYCVAKYGKKWVRTRTVTDSLNPRWN EQYTWQVYDPCTVLTVAVFDNWRMFAFAGAGDEQRQDYRIGKVRVRVSTLESNRAYTASY PLLVLLRSGLKKMGEVQLAVRFTSPAHLPDTWATYTSPLLPRMHYLRPIGVAQQEALRAA AVRVVAAWLERSEPPLGREVVRHMLDVDAHTWSVRRAKANWFRIMGVLAWAVGLARWLDS VQRWRSPPTTVLVHVLYLVLVWYPELAVPTASLYVFLIGVWYYRFRPRGPAGMDARLSQA DTVEADDLEEEFDAVPPPEVLRARYERLRTLAGRVQRVMGDVAAQGERVQALVSWRDPRA SRIFVGVCLAVAVALYAMPSKMVAVAGGFYYLRHPMFRDPMPPAAVNFFRRLPSLSDRML

Transcript Sequence

Transcript ID	Os01t0587300-00
Transcript Infomation	cdna chromosome:IRGSP-1.0:1:22868546:22871788:-1 gene:Os01g0587300 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to C2 domain-containing protein. (Os01t0587300-00)
Sequence	ATGGCGGCCGGTGCGCCCCCGCCGGAGTCTGGGCCGCCGCCGCCGGGGCCGCCGGGGGCG ATGCGGGTGGCGCGGAGGCTGGCGGTGGAGGTGGTGGACGCGCGGGACCTGGTGCCCAAG GACGGGCTCGGCACGTCGAGTGCCTTCGCCGTCGTGGACTTCGACGGGCAGCGGAAGCGG ACGCGCACCGTGCCGCGCGACCTCAGCCCGCAGTGGCACGAGCGGCTCGAGTTCGCCGTG CACGACCCGGCCGCCATGCACGCCGAGGCGCTCGACGTCTCGCTCTACCACGACCGCCGC TTCAACCCTTCCGGCGGCGGCGGCGGCGGTGGCGGGAAGAACCACTTCCTCGGCCGCGTG CGCATCTACGGGTCGCAGTTCTCGCGGCGAGGGGAGGAGGGGATCGTGTACTTCCCGCTC GAGAAGCGGAGCTTGCTCAGCTGGATCCGCGGCGAGGTTGGCCTCAAGATTTACTACTAC GACGAGGCGCCGCCGCCGCCGGAGGATAGGCCGCCGGAGGGTGGTGGTGGTGACAACGCG CCGCCGCCTGAGGTCCCGCCTGAGGCGCCCAGGGACCTCCCGGACATCCCCGCGCCGACC GAGGCCGCCGTCGAGGTGCAGCAGCCGCCGGTGCATCCCCCTGTCATCATCGTGGAAGAG GCGCCGCCGCCGATGCATCACCCGATGATGCCGCCGATGCACGGCCCGCACGGCCCGATG ATGCCGCCGGCGGTGCACGGGCCGCACGGGCCAATGGCGCCGCCGATGCATCAGCATCAG CATCCGCAGCCGCAGCCGGAGCCGGAGCCTGAACCGGAGCCGGACGGCGGCGAGGCGGGG TACCCGCCCGAGGTGCGCAAGACGCGGATGGCCACGGAGCGCGTCCGCATCGCGCGCCAC CTGAGCGGCGGGTTGGGGCCGGAGTACTACGCCACCTCGCCGCGCGTCATCTCCGGGCGG TTCGTGTCCACCGGCGACGCCGTCGAGCCGGTGCAGTCGTCGTACGACCTGGTGGAGCCG ATGCGCTACCTGTTCGTCCGCGTCGTGAAGGTGCGCGGCATCCGCGCCTGCGAGGGGCCG TACGTGAAGATCCAGGCCGGCCCGCACACGCTCCGGTCGCGCCCCGGCCGCGACGTCTCC GGCACCGGCAACCCGGAGTGGAACCAGGTGTTCGCCATCAACCACGCCAAGCCGGAGCCG ACGCTGGAGATATCCGTCTGGGACGGCGGCGCGCCGTCCCCGATCGAGGCCTTCCTCGGT GGCGTCTGCTTCGACCTCTCCGACGTGCCGGTCCGCGACCAGCCGGACGGCCCGCTGGCG CCGCAGTGGTACCGGCTCGAGGGCGGCGAGCCCGGCATGGTGACCGGCGACATCATGGTG GCGGTGTGGATCGGCACGCAGGCCGACGAGGCGTTCCCGGAGGCGTGGAACACCGACGCG CCGTACGCCGCGTACACGCGCTCCAAGGTGTACCAGTCGCCCAAGCTCTGGTACCTGCGC GCGTCGGTGATCGAGGCGCAGGACCTGCGCGTGCCGGCGCCGCCGCCGGGGCTGCCGTTC GACGTGCGCGTCAAGATCCAGGTCGGGTTCCAGTCGGCGAGGACGCGGCGGTCGGTGGCG AGCAGGAGCAGCGGCTCGGCGTTCGCGTGGGAGGAGGACCTCATGTTCGTCGTGTCCGAG CCGCTCGACGAGAGCCTCGTCGTCCTCGTCGAGGACCGCTCCATGATCAAGGAGCCGGCG CTGCTCGGACACGCCACCATCCCCGTCAACTCCGTCGAGCAGCGTCTCCACGAGCGGCAA CTCGTCGCGTCGAGGTGGTTCAGCCTCGAGGGTGGCACCTCCGACATCGGCATTGGTCCC GGCGGCGGCCCGCCGGGGTTCTACTCCGGCCGGCTTCACCTCCGTCTGTGCCTGGAAGGA GGGTACCACGTGCTCGACGAGGCGGCGCACGTGTGCAGCGACTACCGGCCGACGGCGAAG CAGCTGTGGAGGCCGCCGGTGGGCGTGCTGGAGCTGGGCATCATCGGGGCGTGCGGGCTG CTGCCGATGAAGACGAAGGGCGGCGCCAAGGGGTCGACGGACGCCTACTGCGTGGCCAAG TACGGCAAGAAGTGGGTGCGGACGCGCACCGTCACGGACAGCCTCAACCCGCGGTGGAAC GAGCAGTACACGTGGCAGGTGTACGACCCGTGCACGGTGCTCACGGTGGCGGTGTTCGAC AACTGGCGGATGTTCGCCTTCGCCGGCGCCGGGGACGAGCAGCGGCAGGACTACCGGATC GGGAAGGTGCGGGTGCGCGTGTCCACGCTGGAGAGCAACCGGGCGTACACGGCGTCGTAC CCGCTGCTCGTGCTGCTCCGGTCGGGGCTCAAGAAGATGGGGGAGGTGCAGCTCGCCGTG CGGTTCACGTCGCCGGCGCACCTGCCGGACACCTGGGCCACCTACACCTCGCCGCTGCTG CCGCGGATGCACTACCTCCGCCCGATCGGCGTCGCGCAGCAGGAGGCGCTGCGCGCCGCC GCCGTGCGCGTCGTCGCCGCGTGGCTGGAGCGGTCCGAGCCGCCGCTGGGGCGGGAGGTG GTGCGCCACATGCTCGACGTGGACGCGCACACGTGGAGCGTGCGGCGCGCCAAGGCGAAC TGGTTCCGCATCATGGGGGTGCTCGCCTGGGCCGTCGGGCTCGCGCGGTGGCTCGACAGC GTGCAGCGGTGGCGCAGCCCGCCCACCACCGTGCTCGTTCACGTCCTCTACCTCGTCCTC GTCTGGTACCCGGAGCTGGCCGTGCCCACGGCGTCGCTCTACGTCTTCCTCATCGGCGTC TGGTACTACCGGTTCCGGCCGCGCGGCCCCGCCGGCATGGACGCGCGGCTGTCGCAGGCC GACACGGTGGAGGCCGACGACCTGGAGGAGGAGTTCGACGCCGTGCCGCCGCCGGAGGTG CTCCGGGCGCGCTACGAGAGGCTGCGGACGCTGGCGGGGCGGGTGCAGCGCGTCATGGGC GACGTCGCGGCGCAGGGGGAGAGGGTGCAGGCGCTGGTGAGCTGGAGGGACCCGCGCGCC AGCCGGATCTTCGTCGGCGTCTGCCTCGCCGTCGCCGTCGCGCTGTACGCCATGCCGTCC AAGATGGTGGCCGTCGCCGGCGGGTTCTACTACCTCCGCCACCCGATGTTCCGGGACCCC ATGCCGCCGGCGGCCGTCAACTTCTTCCGGCGGCTGCCCAGCCTCTCCGACAGGATGCTC TGA