Gene sequences

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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os01t0587000-01
CDS Infomation	cds chromosome:IRGSP-1.0:1:22855514:22859716:-1 gene:Os01g0587000 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Vacuolar ATP synthase subunit d (EC 3.6.3.14) (V-ATPase d subunit) (Vacuolar proton pump d subunit) (V-ATPase 41 KDa accessory protein) (DVA41). (Os01t0587000-01)
Sequence	ATGTACGGGTGGGAGATGCTCTCGTTCAACATCCACGACGGCTTCCTGGAGGCCATCGTG CGGGGGAACCGGTCGGGCCTCCTCACCGCCGCCGACTACAACAACCTCTGCCAGTGCGAG AACCTCGACGACGTCAAGATGCACCTCACCGCCACCGAGTACGGCCCCTACCTCCAGAAC GAACCTTCACCCCTGCACACAACTACAATTGTGGAGAAGTGCACTCTTAAACTGGTTGAT GAGTACAAACACATGATGTGCCAGGCGACTGAACCACTATCCACATTCTTACAGTATATA ACGTATGGCCACATGATCGACAATGTTGTACTTATTGTTACCGGAACATTGCATGAGAGA GATGTTAATGAACTATTGGAGAAATGCCATCCATTGGGAATGTTTGACAGCATTGCATCT CTTGCAGTTGCTCAAAATATGCGCGAGCTTTACAGATTGGTTTTGGTTGACACACCGTTA GCCCCATACTTCTCAGAATGCATTACATCTGAGGATTTGGATGACATGAATATCGAGATT ATGAGGAACACTCTTTACAAAGCATACCTTGAGGACTTTTACAAATTCTGTGAAAAACTT GGTGGTGCAACTGCTGAGATTATGTGCGATCTTCTGTCATTTGAAGCAGACAGAAGAGCT GTGAACATTACAATAAACAGTATTGGTACAGAGTTGACTAGAGATGACCGTCGGAAGCTG TACTCCAACTTTGGTTTATTGTATCCATATGGTCATGAAGAACTGGCTGTTTGTGAAGAT GTTGATCAGGTCCGTGGTGTAATGGAGAAGTACCCTCCATACCAGGCTATTTTTGCCAAA ATTTCGTATGGGGAAAGCCAAATGTTGGATAAGGCCTTCTATGAGGAGGAAGTGCGGAGG CTGTGCTTGTCATTTGAACAGCAGTTCCACTATGCTGTTTTCTTTGCTTACATAAGGCTA CGGGAGCAGGAGATTAGGAACTTGATGTGGATATCAGAGTGTGTTGCGCAGAATCAGAAG AACAGGGTCCACGACAGCGTTGTGTTCATCTTTTGA

Peptide Sequence

PEP ID	Os01t0587000-01
PEP Infomation	pep chromosome:IRGSP-1.0:1:22855514:22859716:-1 gene:Os01g0587000 transcript:Os01t0587000-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Vacuolar ATP synthase subunit d (EC 3.6.3.14) (V-ATPase d subunit) (Vacuolar proton pump d subunit) (V-ATPase 41 KDa accessory protein) (DVA41). (Os01t0587000-01)
Sequence	MYGWEMLSFNIHDGFLEAIVRGNRSGLLTAADYNNLCQCENLDDVKMHLTATEYGPYLQN EPSPLHTTTIVEKCTLKLVDEYKHMMCQATEPLSTFLQYITYGHMIDNVVLIVTGTLHER DVNELLEKCHPLGMFDSIASLAVAQNMRELYRLVLVDTPLAPYFSECITSEDLDDMNIEI MRNTLYKAYLEDFYKFCEKLGGATAEIMCDLLSFEADRRAVNITINSIGTELTRDDRRKL YSNFGLLYPYGHEELAVCEDVDQVRGVMEKYPPYQAIFAKISYGESQMLDKAFYEEEVRR LCLSFEQQFHYAVFFAYIRLREQEIRNLMWISECVAQNQKNRVHDSVVFIF

Transcript Sequence

Transcript ID	Os01t0587000-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:1:22855514:22859716:-1 gene:Os01g0587000 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Vacuolar ATP synthase subunit d (EC 3.6.3.14) (V-ATPase d subunit) (Vacuolar proton pump d subunit) (V-ATPase 41 KDa accessory protein) (DVA41). (Os01t0587000-01)
Sequence	GCATCCGCACCCGGATCTGCCACCGCCGCGGCTTCCCTCCCCCCCTCCTCCCGATCCACC CCTCCCGCCGCCGCCACCGCCACCGCCGCCGCCGCCGGCCGGCGAGAGAGACAGGATGTA CGGGTGGGAGATGCTCTCGTTCAACATCCACGACGGCTTCCTGGAGGCCATCGTGCGGGG GAACCGGTCGGGCCTCCTCACCGCCGCCGACTACAACAACCTCTGCCAGTGCGAGAACCT CGACGACGTCAAGATGCACCTCACCGCCACCGAGTACGGCCCCTACCTCCAGAACGAACC TTCACCCCTGCACACAACTACAATTGTGGAGAAGTGCACTCTTAAACTGGTTGATGAGTA CAAACACATGATGTGCCAGGCGACTGAACCACTATCCACATTCTTACAGTATATAACGTA TGGCCACATGATCGACAATGTTGTACTTATTGTTACCGGAACATTGCATGAGAGAGATGT TAATGAACTATTGGAGAAATGCCATCCATTGGGAATGTTTGACAGCATTGCATCTCTTGC AGTTGCTCAAAATATGCGCGAGCTTTACAGATTGGTTTTGGTTGACACACCGTTAGCCCC ATACTTCTCAGAATGCATTACATCTGAGGATTTGGATGACATGAATATCGAGATTATGAG GAACACTCTTTACAAAGCATACCTTGAGGACTTTTACAAATTCTGTGAAAAACTTGGTGG TGCAACTGCTGAGATTATGTGCGATCTTCTGTCATTTGAAGCAGACAGAAGAGCTGTGAA CATTACAATAAACAGTATTGGTACAGAGTTGACTAGAGATGACCGTCGGAAGCTGTACTC CAACTTTGGTTTATTGTATCCATATGGTCATGAAGAACTGGCTGTTTGTGAAGATGTTGA TCAGGTCCGTGGTGTAATGGAGAAGTACCCTCCATACCAGGCTATTTTTGCCAAAATTTC GTATGGGGAAAGCCAAATGTTGGATAAGGCCTTCTATGAGGAGGAAGTGCGGAGGCTGTG CTTGTCATTTGAACAGCAGTTCCACTATGCTGTTTTCTTTGCTTACATAAGGCTACGGGA GCAGGAGATTAGGAACTTGATGTGGATATCAGAGTGTGTTGCGCAGAATCAGAAGAACAG GGTCCACGACAGCGTTGTGTTCATCTTTTGACCTGCTCCTGCCACTCCACGGATGGTTGT ACAAAATGCCAGGTTTGATGATGGCACAATCGGCTGCGATAATTATAAGCACATGACTTA TTATGCCCCATTCATTTCTCTTTCTGCTCTGCTCGAAAGCAAGACCATGAGTGAATGTAC TATTGTTTTACTTTTTGTAGTAAAATAAAGGCTTGATTATCTTGTGGTAAATTGAATAAA TCCTGTCTATTTTGGGAGGCTGTAACTATCAATATCTAGTGAACATGGAACAGTTTGTTG GCTTATTGCCAACATCCAAATTGCGCCCAACTCTGTTTTGGTGCATCAGGTTCTGTTCTA ATTTTCTACTTATGTAACCTGACGGAGTATAAAGAGAGAATGTTTCTCTTTTTTG