Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os01t0585300-01
CDS Infomation

cds chromosome:IRGSP-1.0:1:22754546:22755398:-1 gene:Os01g0585300 gene_biotype:protein_coding transcript_biotype:protein_coding description:Protein of unknown function DUF1118 family protein. (Os01t0585300-01)
Sequence

ATGGCTGCCGTCCAAGCAGCAATCTCCACCTGCTGCTCTTCGTCTTGCCTGTCCCGGCCG
CCACCGCCGTTCGCGAGGAGGCGGCGCTTCAAGGTCACGGCCATGGCTCCCCAGAAGAAG
GTGAACAGGTACGACGAGAAGTGGTCGAAGCAGTGGTTCGGGGCGGGGATATTCGCGGAG
GGGAGCGAGGAGGTGGAGGTGGACGTGTTCAAGAAGCTGGAGAGGCGGAAGGTGCTGAGC
ACGGTGGAGAAGGCCGGGCTGCTGTCCAGGGCGGAGGAGCTCGGCGTCACGCTCTCCTCG
CTCGAGGAGCTCGGCCTCCTCTCCAAGGCCGAGGACCTCGGCCTCCTCAGCCTCGTCGAG
GCCGCCGCCGCCGCCTCCCCCGACGCCCTCGCCTCCGTCTCGCTCCCGCTCCTCGTCGCC
GCCATCGCCGCCGTCGTCCTCGTCCCCGACGACTCCGCCGCCCTCGTCGCGCTCCAGGCC
GTCCTCGCCGCCGTCCTCCTCGCCGCCGCCGCCGGCCTCTTCGTCGGCTCCGTCGTCCTC
GCCGGCCTGCAGGAGTCCGACTGA

Peptide Sequence

PEP ID

Os01t0585300-01
PEP Infomation

pep chromosome:IRGSP-1.0:1:22754546:22755398:-1 gene:Os01g0585300 transcript:Os01t0585300-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Protein of unknown function DUF1118 family protein. (Os01t0585300-01)
Sequence

MAAVQAAISTCCSSSCLSRPPPPFARRRRFKVTAMAPQKKVNRYDEKWSKQWFGAGIFAE
GSEEVEVDVFKKLERRKVLSTVEKAGLLSRAEELGVTLSSLEELGLLSKAEDLGLLSLVE
AAAAASPDALASVSLPLLVAAIAAVVLVPDDSAALVALQAVLAAVLLAAAAGLFVGSVVL
AGLQESD

Transcript Sequence

Transcript ID

Os01t0585300-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:1:22754546:22755398:-1 gene:Os01g0585300 gene_biotype:protein_coding transcript_biotype:protein_coding description:Protein of unknown function DUF1118 family protein. (Os01t0585300-01)
Sequence

GAATTCTTGCTTCGCCAGAGGAAGAAGAGAAGAGAGAAGGGGAGGAGGAAGAAATGGCTG
CCGTCCAAGCAGCAATCTCCACCTGCTGCTCTTCGTCTTGCCTGTCCCGGCCGCCACCGC
CGTTCGCGAGGAGGCGGCGCTTCAAGGTCACGGCCATGGCTCCCCAGAAGAAGGTGAACA
GGTACGACGAGAAGTGGTCGAAGCAGTGGTTCGGGGCGGGGATATTCGCGGAGGGGAGCG
AGGAGGTGGAGGTGGACGTGTTCAAGAAGCTGGAGAGGCGGAAGGTGCTGAGCACGGTGG
AGAAGGCCGGGCTGCTGTCCAGGGCGGAGGAGCTCGGCGTCACGCTCTCCTCGCTCGAGG
AGCTCGGCCTCCTCTCCAAGGCCGAGGACCTCGGCCTCCTCAGCCTCGTCGAGGCCGCCG
CCGCCGCCTCCCCCGACGCCCTCGCCTCCGTCTCGCTCCCGCTCCTCGTCGCCGCCATCG
CCGCCGTCGTCCTCGTCCCCGACGACTCCGCCGCCCTCGTCGCGCTCCAGGCCGTCCTCG
CCGCCGTCCTCCTCGCCGCCGCCGCCGGCCTCTTCGTCGGCTCCGTCGTCCTCGCCGGCC
TGCAGGAGTCCGACTGATCGTCGCCGCAGGGTTTGATGATCACTAGGACATGTACGTATT
AATCACCGTATTTATACAGTGCTTAGTGTGTTACTAGTATCGACTGGTTCTCGAGATGAA
AATTTGTTGTAAATTTCAAGGAGTTTCAGGCTGC