Gene sequences

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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os01t0582400-01
CDS Infomation	cds chromosome:IRGSP-1.0:1:22591434:22596164:-1 gene:Os01g0582400 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:CYCLOPHILIN 57 description:Similar to Multidomain cyclophilin type peptidyl-prolyl cis-trans isomerase. (Os01t0582400-01)
Sequence	ATGTCGTCGGTGTACGTGCTGGAGCCGCCGACGAAGGGCAAGGTGGTAGTGCAGACGACG GCCGGCCCGCTCGACATCGAGCTGTGGCCGAAGGAGGCCCCCAAGGCGGTGCGCAACTTC GTGCAGCTCTGCCTCGAGGGCTACTACGACGGCACGCTCTTCCACCGCGTCATCAAGTCC TTCCTCGTCCAGGGCGGCGACCCCACCGGCTCCGGCACCGGGGGTGAGAGCATATATGGG GCCCCATTTGCAGATGAGTTCCATACGCGCTTGAGGTTTAACCACAGGGGTTTAGTGGCG TGTGCCAATGCCGGCACGCCTCACTCGAATGGGAGTCAATTCTTTATCAGCCTTGACCGT TGTGATTGGCTCGATAAGAAGAATACCATCTTTGGGAAGGTCACTGGCGATTCTATTTTC AACCTTCTAGCCTTGGCTGATATCGAGACTGATAAGGATGATCGACCTGTGTATCCGCAG AAAATTCTTTCAGTTGAGGTACTCTGGAACCCATTTGATGATATTGTTCCAAGGCAACTT AAGAAGACTGAGCCTACTGCCAAGGGTGATATCGAGGGGAAATCAAAGAAGAAAGCCGTT AAGCAACTTAATGTGCTTTCATTTGGAGATGAAGTAGAAGAGGAGGAGAATGAGGCAGCA TCCTCTGTGAAGGACAAAATAAAAAGTATTCACGATGTGTTGGATGATCCTCGGTTTCTT AAAGGAGAGGCACCGGATGAGCAACTGACCAAGGAGCAAGAGGACAAAAAAAAGGAGACT GTTCAATCTGTCAGGGAGGCTTTAGTATCAAAAAAATCTGACTTCAGAGAGCTAGAGCAT GATTCAGAAACAGATGATTATCCTGACGATGAAAACGAGGAGGATTTTGATAACAGAATG CGCTCTCAAATTCTAAGAAAACGCAGGGAGCTTGGGGACATCCGCTCTAGTGAAACCTCC AAAAAAACAGATAAAGCACACCGTAAAGACAAGGAGTTACCAGTTCACAGGAGTGACGAT GACAATGATGACGACAATGAAGACCACCAGCTAACCAAGTCTAGAAAATTTTCTATGAAG AAAAAAGGCATTGGCTCAGAAGCCAGTGCTGAAAGGATGTCCAAAGGCGATGCTAATTTG CAGCTATTGAATCCAGCTGAGCAAGAGAAGCATTTGCAAAAACAGAAAAGGCGCCGTCTT CAAGGCCGTGAAGATGAGACGTTAGCGAAGCTACAGAAGTTCAAGGCATCGTTTCTCAGT AAGAACCCTGCAACTGGTAACACAGAAAAGAAGACTGATGAAGAGGATTACACAGGGTGG CACAGCAACCGGCTGACTTTTGAACCTGATTCTTCTAAGGATGGAATGACGAGGAAAGAT GATCCAGATGACTATGTAGTGGTTGATCCTCTCCTTGAGAAAGGAAAACAAAAATTCAAC AAGATGCAAGCAAAGCTTAAGCGGAGAGAACGTGAATGGGCAGGCAGATCTCTGACCTGA

Peptide Sequence

PEP ID	Os01t0582400-01
PEP Infomation	pep chromosome:IRGSP-1.0:1:22591434:22596164:-1 gene:Os01g0582400 transcript:Os01t0582400-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:CYCLOPHILIN 57 description:Similar to Multidomain cyclophilin type peptidyl-prolyl cis-trans isomerase. (Os01t0582400-01)
Sequence	MSSVYVLEPPTKGKVVVQTTAGPLDIELWPKEAPKAVRNFVQLCLEGYYDGTLFHRVIKS FLVQGGDPTGSGTGGESIYGAPFADEFHTRLRFNHRGLVACANAGTPHSNGSQFFISLDR CDWLDKKNTIFGKVTGDSIFNLLALADIETDKDDRPVYPQKILSVEVLWNPFDDIVPRQL KKTEPTAKGDIEGKSKKKAVKQLNVLSFGDEVEEEENEAASSVKDKIKSIHDVLDDPRFL KGEAPDEQLTKEQEDKKKETVQSVREALVSKKSDFRELEHDSETDDYPDDENEEDFDNRM RSQILRKRRELGDIRSSETSKKTDKAHRKDKELPVHRSDDDNDDDNEDHQLTKSRKFSMK KKGIGSEASAERMSKGDANLQLLNPAEQEKHLQKQKRRRLQGREDETLAKLQKFKASFLS KNPATGNTEKKTDEEDYTGWHSNRLTFEPDSSKDGMTRKDDPDDYVVVDPLLEKGKQKFN KMQAKLKRREREWAGRSLT

Transcript Sequence

Transcript ID	Os01t0582400-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:1:22591434:22596164:-1 gene:Os01g0582400 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:CYCLOPHILIN 57 description:Similar to Multidomain cyclophilin type peptidyl-prolyl cis-trans isomerase. (Os01t0582400-01)
Sequence	GACGACCATACGAACCCGAGCACCCGAGCCATCCCGACCGGCCGGAGAGCGAGCCCTAGG GCAGAGCGGCGGAGGCGGAGGCCGGAGGCGAACGGGAGGCCGGCGAGATGTCGTCGGTGT ACGTGCTGGAGCCGCCGACGAAGGGCAAGGTGGTAGTGCAGACGACGGCCGGCCCGCTCG ACATCGAGCTGTGGCCGAAGGAGGCCCCCAAGGCGGTGCGCAACTTCGTGCAGCTCTGCC TCGAGGGCTACTACGACGGCACGCTCTTCCACCGCGTCATCAAGTCCTTCCTCGTCCAGG GCGGCGACCCCACCGGCTCCGGCACCGGGGGTGAGAGCATATATGGGGCCCCATTTGCAG ATGAGTTCCATACGCGCTTGAGGTTTAACCACAGGGGTTTAGTGGCGTGTGCCAATGCCG GCACGCCTCACTCGAATGGGAGTCAATTCTTTATCAGCCTTGACCGTTGTGATTGGCTCG ATAAGAAGAATACCATCTTTGGGAAGGTCACTGGCGATTCTATTTTCAACCTTCTAGCCT TGGCTGATATCGAGACTGATAAGGATGATCGACCTGTGTATCCGCAGAAAATTCTTTCAG TTGAGGTACTCTGGAACCCATTTGATGATATTGTTCCAAGGCAACTTAAGAAGACTGAGC CTACTGCCAAGGGTGATATCGAGGGGAAATCAAAGAAGAAAGCCGTTAAGCAACTTAATG TGCTTTCATTTGGAGATGAAGTAGAAGAGGAGGAGAATGAGGCAGCATCCTCTGTGAAGG ACAAAATAAAAAGTATTCACGATGTGTTGGATGATCCTCGGTTTCTTAAAGGAGAGGCAC CGGATGAGCAACTGACCAAGGAGCAAGAGGACAAAAAAAAGGAGACTGTTCAATCTGTCA GGGAGGCTTTAGTATCAAAAAAATCTGACTTCAGAGAGCTAGAGCATGATTCAGAAACAG ATGATTATCCTGACGATGAAAACGAGGAGGATTTTGATAACAGAATGCGCTCTCAAATTC TAAGAAAACGCAGGGAGCTTGGGGACATCCGCTCTAGTGAAACCTCCAAAAAAACAGATA AAGCACACCGTAAAGACAAGGAGTTACCAGTTCACAGGAGTGACGATGACAATGATGACG ACAATGAAGACCACCAGCTAACCAAGTCTAGAAAATTTTCTATGAAGAAAAAAGGCATTG GCTCAGAAGCCAGTGCTGAAAGGATGTCCAAAGGCGATGCTAATTTGCAGCTATTGAATC CAGCTGAGCAAGAGAAGCATTTGCAAAAACAGAAAAGGCGCCGTCTTCAAGGCCGTGAAG ATGAGACGTTAGCGAAGCTACAGAAGTTCAAGGCATCGTTTCTCAGTAAGAACCCTGCAA CTGGTAACACAGAAAAGAAGACTGATGAAGAGGATTACACAGGGTGGCACAGCAACCGGC TGACTTTTGAACCTGATTCTTCTAAGGATGGAATGACGAGGAAAGATGATCCAGATGACT ATGTAGTGGTTGATCCTCTCCTTGAGAAAGGAAAACAAAAATTCAACAAGATGCAAGCAA AGCTTAAGCGGAGAGAACGTGAATGGGCAGGCAGATCTCTGACCTGACCGCATAAGCTGC TTGAGGTGCTTTACTGTTTCCTTCATAAGCGGCCTTCCTGAATTTTTCAGCTTACATTAA TTTATCCTTTTTTTGCCTCTCAGAGGTGCACCGTGCAAAAGATTACCTCATATCATAACA GTGCCACTACTGCAGTTTTGATGGTGTTGTAACTGTACACTGCGTTTCGCTATGTTGTGG TTCATGGTAGAGGGACCACCTGTAGACTAGTGCTTTTAACATTAACATTTGTATCATTGT CAATCAAACTGTAAATAACAATTGTTTTAAACTTAGAGGTTCATAATGCCCTTATTAAGT TGCAGTGGTCTTTTTTTTTATTGG