Gene sequences

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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os01t0581300-01
CDS Infomation	cds chromosome:IRGSP-1.0:1:22535013:22538645:1 gene:Os01g0581300 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:e-ionone-forming lycopene cyclase, lycopene e-cyclase, epsilon-ionone-forming lycopene cyclase, lycopene epsilon-cyclase description:Similar to Lycopene epsilon-cyclase (Fragment). (Os01t0581300-01)
Sequence	ATGGAGTTCTCCGGCGGCGCGACCGTGTCGGCGCCGTTCGGTTGCTGCCGTGCGGCGTGG GGCGCCGCGGCGGCGGGTGCGGGGGCGGAGGGAAGGAGCAGGAGGGTTGTGCCGCGCGCG GTGGAGCCGCGGCGGCGCGGGCGGTGGATGGTGAGGTGCGTGGCGACGGAGAAGCACAAG GACGCGGCGGCGCGGCGCGGCGGCGTGGAGGTGGAGTTCGCCGACGAGGAGGACTACGTC AAGGGCGGCGGCGGCGAGCTTCTCTACGTGCAAATGCAGGCGTCCAAGTCCATGGACAGC CAGTCCAAGATCTCCTCCAAGCTGCTGCCCATACCCGATGAAAATTCAGTTCTTGATTTG GTCATCATTGGCTGCGGTCCAGCTGGCTTATCCCTAGCAGCAGAGTCAGCTAAGAAAGGG CTCAATGTTGGTCTCATTGGCCCTGATCTTCCATTCACGAACAACTACGGTGTGTGGGAG GATGAATTCAAAGACCTGGGCCTGGAGAGCTGCATTGAACATGTCTGGAAGGATACTATC GTGTACCTAGACGGTAACAAGCCAATAATGATTGGCCGTGCGTATGGCAGGGTTCACAGG GACTTGCTGCACGAGGAGTTGCTGAGACGATGCTATGACGCTGGCGTCACATACCTCAGC TCGAAGGTGGACAAGATCATGGAATCTCCTGATGGACATCGGGTAGTCTGTTGTGAAGGG GATCGTGAGGTACTTTGCAGGCTTGCCATTGTTGCATCTGGGGCAGCATCTGGTAGGCTT CTAGAGTACGAGGTTGGTGGTCCGCGTGTTTGTGTGCAGACTGCATATGGTGTCGAAGTC GAGGTGGAAAACAATCCATATGATCCCAGCTTAATGGTTTTCATGGACTACAGAGATTGC TTCAAAGACAAATTCTCACATCCTGAGCAAGGAAATCCAACGTTCCTCTATGCCATGCCC ATGTCATCCACACGAATTTTCTTTGAGGAAACATGCCTAGCTTCTAAAGAAGCAATGCCC TTTGACCTCCTTAAAAAGCGGTTGATGTCTCGGTTGGATGCAATGGGAGTTCATATTCGA AAAGTATACGAGGAGGAATGGTCCTACATTCCTGTTGGAGGGTCCTTACCAAATACAGAC CAGAAAAATCTCGCATTTGGTGCGGCAGCAAGTATGGTGCATCCTGCAACCGGATACTCG GTGGTTAGATCATTGTCTGAAGCTCCAAGATATGCATCTGTGATATCTGATATCTTGAGA AACCGTGTCTACCCTGGAGAATATTTGCCTGGAACCTCTCAAAGTTCCAGTCCATCAATG CTTGCATGGAGAACATTATGGCCCCAAGAACGGAAACGTCAACGATCATTCTTCCTTTTT GGGCTGGCTTTGATAATCCAACTGAATAACGAAGGCATTCAGACATTCTTTGAAACCTTT TTCCGGTTGCCCAAATGGATGTGGCGAGGATTCCTTGGTTCGACGCTTTCTTCAGTGGAT CTCATACTCTTTGCATTCTACATGTTCACAATTGCGCCGAACCAAATGCGAATGAACCTT GTCAGACATCTCCTCTCTGATCCGACCGGCTCAACGATGATCAAGACCTACCTGACCTTG TAA

Peptide Sequence

PEP ID	Os01t0581300-01
PEP Infomation	pep chromosome:IRGSP-1.0:1:22535013:22538645:1 gene:Os01g0581300 transcript:Os01t0581300-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:e-ionone-forming lycopene cyclase, lycopene e-cyclase, epsilon-ionone-forming lycopene cyclase, lycopene epsilon-cyclase description:Similar to Lycopene epsilon-cyclase (Fragment). (Os01t0581300-01)
Sequence	MEFSGGATVSAPFGCCRAAWGAAAAGAGAEGRSRRVVPRAVEPRRRGRWMVRCVATEKHK DAAARRGGVEVEFADEEDYVKGGGGELLYVQMQASKSMDSQSKISSKLLPIPDENSVLDL VIIGCGPAGLSLAAESAKKGLNVGLIGPDLPFTNNYGVWEDEFKDLGLESCIEHVWKDTI VYLDGNKPIMIGRAYGRVHRDLLHEELLRRCYDAGVTYLSSKVDKIMESPDGHRVVCCEG DREVLCRLAIVASGAASGRLLEYEVGGPRVCVQTAYGVEVEVENNPYDPSLMVFMDYRDC FKDKFSHPEQGNPTFLYAMPMSSTRIFFEETCLASKEAMPFDLLKKRLMSRLDAMGVHIR KVYEEEWSYIPVGGSLPNTDQKNLAFGAAASMVHPATGYSVVRSLSEAPRYASVISDILR NRVYPGEYLPGTSQSSSPSMLAWRTLWPQERKRQRSFFLFGLALIIQLNNEGIQTFFETF FRLPKWMWRGFLGSTLSSVDLILFAFYMFTIAPNQMRMNLVRHLLSDPTGSTMIKTYLTL

Transcript Sequence

Transcript ID	Os01t0581300-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:1:22535013:22538645:1 gene:Os01g0581300 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:e-ionone-forming lycopene cyclase, lycopene e-cyclase, epsilon-ionone-forming lycopene cyclase, lycopene epsilon-cyclase description:Similar to Lycopene epsilon-cyclase (Fragment). (Os01t0581300-01)
Sequence	AGACGCAGAGACCAGTAGCTTTCGCAGAGGCGGCAGCCACCACCGCCTCCTCCTCCTCCT CCTCATCCGACGGTGTGCAACCAAGCGATGGAGTTCTCCGGCGGCGCGACCGTGTCGGCG CCGTTCGGTTGCTGCCGTGCGGCGTGGGGCGCCGCGGCGGCGGGTGCGGGGGCGGAGGGA AGGAGCAGGAGGGTTGTGCCGCGCGCGGTGGAGCCGCGGCGGCGCGGGCGGTGGATGGTG AGGTGCGTGGCGACGGAGAAGCACAAGGACGCGGCGGCGCGGCGCGGCGGCGTGGAGGTG GAGTTCGCCGACGAGGAGGACTACGTCAAGGGCGGCGGCGGCGAGCTTCTCTACGTGCAA ATGCAGGCGTCCAAGTCCATGGACAGCCAGTCCAAGATCTCCTCCAAGCTGCTGCCCATA CCCGATGAAAATTCAGTTCTTGATTTGGTCATCATTGGCTGCGGTCCAGCTGGCTTATCC CTAGCAGCAGAGTCAGCTAAGAAAGGGCTCAATGTTGGTCTCATTGGCCCTGATCTTCCA TTCACGAACAACTACGGTGTGTGGGAGGATGAATTCAAAGACCTGGGCCTGGAGAGCTGC ATTGAACATGTCTGGAAGGATACTATCGTGTACCTAGACGGTAACAAGCCAATAATGATT GGCCGTGCGTATGGCAGGGTTCACAGGGACTTGCTGCACGAGGAGTTGCTGAGACGATGC TATGACGCTGGCGTCACATACCTCAGCTCGAAGGTGGACAAGATCATGGAATCTCCTGAT GGACATCGGGTAGTCTGTTGTGAAGGGGATCGTGAGGTACTTTGCAGGCTTGCCATTGTT GCATCTGGGGCAGCATCTGGTAGGCTTCTAGAGTACGAGGTTGGTGGTCCGCGTGTTTGT GTGCAGACTGCATATGGTGTCGAAGTCGAGGTGGAAAACAATCCATATGATCCCAGCTTA ATGGTTTTCATGGACTACAGAGATTGCTTCAAAGACAAATTCTCACATCCTGAGCAAGGA AATCCAACGTTCCTCTATGCCATGCCCATGTCATCCACACGAATTTTCTTTGAGGAAACA TGCCTAGCTTCTAAAGAAGCAATGCCCTTTGACCTCCTTAAAAAGCGGTTGATGTCTCGG TTGGATGCAATGGGAGTTCATATTCGAAAAGTATACGAGGAGGAATGGTCCTACATTCCT GTTGGAGGGTCCTTACCAAATACAGACCAGAAAAATCTCGCATTTGGTGCGGCAGCAAGT ATGGTGCATCCTGCAACCGGATACTCGGTGGTTAGATCATTGTCTGAAGCTCCAAGATAT GCATCTGTGATATCTGATATCTTGAGAAACCGTGTCTACCCTGGAGAATATTTGCCTGGA ACCTCTCAAAGTTCCAGTCCATCAATGCTTGCATGGAGAACATTATGGCCCCAAGAACGG AAACGTCAACGATCATTCTTCCTTTTTGGGCTGGCTTTGATAATCCAACTGAATAACGAA GGCATTCAGACATTCTTTGAAACCTTTTTCCGGTTGCCCAAATGGATGTGGCGAGGATTC CTTGGTTCGACGCTTTCTTCAGTGGATCTCATACTCTTTGCATTCTACATGTTCACAATT GCGCCGAACCAAATGCGAATGAACCTTGTCAGACATCTCCTCTCTGATCCGACCGGCTCA ACGATGATCAAGACCTACCTGACCTTGTAAAACCATTTCAGCAGTCTACAAGAATATTAG GAAATGTACAGTTTTGTAGTTTGTACATAACATAGTGAGAGCCAGAGGATATGGGGGTTG GGGGGTTACTTATCATGCTAGAACAACAAAACACTGCAAGAATTTTATGCATGAATTTGG C