Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os01t0580200-01
CDS Infomation	cds chromosome:IRGSP-1.0:1:22466601:22472572:1 gene:Os01g0580200 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:BETA-GALACTOSIDASE 3 description:Similar to Beta-galactosidase precursor (EC 3.2.1.23) (Lactase). (Os01t0580200-01)
Sequence	ATGGCCGCCTCCGCCGTCGCCGTCGCGTTCGTCGTGGCGGTGGCCGCCGTGCTGGCCGCG GCGGCGTCCGCGGCCGTGACGTACGACCGGAAGGCTGTGGTGGTGAACGGGCAGCGGAGG ATCCTCATCTCCGGCTCCATCCACTACCCGAGGAGCACCCCCGAGATGTGGCCGGATCTG ATAGAGAAGGCCAAGGACGGCGGCCTCGACGTGGTGCAGACGTACGTCTTCTGGAACGGC CACGAGCCGTCCCCCGGCCAGTACTACTTCGAGGGGAGGTATGATCTGGTGCACTTCATC AAGCTGGTGAAGCAGGCCGGCCTCTACGTGAACCTCCGCATTGGCCCCTACGTCTGCGCC GAGTGGAACTTCGGTGGGTTCCCTGTTTGGCTCAAGTATGTCCCCGGCATCAGCTTTAGG ACTGATAATGAGCCGTTCAAGGCTGAGATGCAGAAGTTCACCACAAAGATCGTCGAAATG ATGAAGTCGGAAGGGCTCTTTGAATGGCAAGGAGGGCCTATAATCCTCTCCCAGATAGAG AACGAGTTTGGGCCCTTGGAGTGGGATCAAGGTGAGCCTGCCAAGGCATATGCATCATGG GCAGCTAACATGGCAGTTGCGCTCAACACCAGTGTGCCATGGATCATGTGCAAAGAAGAT GATGCCCCTGATCCAATTATTAATACATGCAATGGATTTTACTGTGATTGGTTCTCCCCA AATAAACCTCACAAACCTACCATGTGGACTGAAGCCTGGACTGCTTGGTATACAGGCTTT GGTATTCCAGTTCCACATAGACCAGTAGAGGATCTAGCATATGGTGTCGCCAAGTTTATC CAGAAGGGTGGCTCTTTTGTGAATTATTACATGTATCATGGTGGAACAAACTTTGGACGC ACAGCTGGTGGCCCATTCATTGCCACTAGTTATGACTATGATGCTCCTATTGATGAATAT GGTTTGTTGAGAGAACCAAAATGGGGCCACTTGAAGCAGTTGCATAAAGCCATAAAACTT TGTGAACCTGCCTTGGTTGCAGGAGACCCCATTGTAACTTCACTTGGAAATGCTCAGAAG TCATCAGTTTTTAGATCAAGCACAGGAGCTTGTGCAGCTTTCCTTGAGAACAAGGATAAA GTATCTTATGCAAGGGTAGCATTTAATGGCATGCACTATGACCTGCCTCCGTGGTCCATA AGTATTCTCCCAGACTGCAAAACGACAGTCTTCAATACTGCTAGGGTGGGAAGTCAGATT TCACAGATGAAAATGGAATGGGCTGGAGGATTTGCATGGCAATCATACAACGAGGAGATA AATTCCTTTGGTGAGGATCCACTTACAACAGTAGGATTACTGGAACAAATAAATGTGACG AGGGATAACACAGACTACTTATGGTATACCACATATGTCGATGTTGCCCAGGATGAGCAG TTCCTTAGCAATGGGGAGAATCTCAAGCTTACTGTGATGTCAGCTGGTCATGCTTTGCAT ATTTTCATTAATGGACAACTGAAAGGAACTGTTTATGGCAGCGTAGATGACCCAAAACTG ACTTATACTGGGAATGTGAAGCTCTGGGCAGGCAGCAATACAATTTCCTGCTTAAGTATA GCAGTTGGCCTCCCAAATGTGGGAGAACATTTTGAGACTTGGAATGCTGGGATTCTTGGC CCAGTGACGCTTGATGGCCTGAATGAGGGAAGAAGGGATCTGACATGGCAGAAATGGACT TATCAGGTAGGACTGAAAGGTGAGTCTATGAGTCTTCATTCACTCAGTGGAAGCTCAACA GTGGAGTGGGGAGAACCTGTGCAGAAGCAGCCTCTAACATGGTACAAGGCTTTTTTCAAT GCACCGGATGGTGATGAGCCATTAGCTTTGGACATGAGTAGTATGGGGAAGGGGCAAATC TGGATAAATGGACAAGGTATTGGGCGATATTGGCCTGGCTACAAGGCTTCTGGAAACTGT GGAACCTGTGATTATCGAGGTGAATACGATGAAACGAAGTGTCAAACCAACTGTGGTGAC TCTTCTCAGAGATGGTACCATGTTCCTCGTTCATGGCTTAGTCCCACAGGAAACCTTTTG GTCATATTCGAGGAGTGGGGTGGTGACCCTACTGGAATCTCAATGGTCAAAAGAAGCATC GGAAGTGTCTGCGCTGATGTGTCCGAATGGCAGCCATCAATGAAGAACTGGCATACAAAA GACTACGAGAAAGCAAAAGTCCACCTCCAATGTGACAATGGACAGAAGATAACTGAAATA AAATTTGCTAGCTTTGGCACACCACAGGGCTCCTGTGGAAGCTACACCGAAGGAGGCTGC CATGCGCACAAGTCGTACGACATATTTTGGAAGAACTGCGTCGGTCAAGAACGCTGCGGG GTAAGCGTTGTTCCAGAAATATTTGGTGGAGATCCATGCCCAGGGACAATGAAACGGGCT GTTGTTGAGGCTATATGCGGTTGA

Peptide Sequence

PEP ID	Os01t0580200-01
PEP Infomation	pep chromosome:IRGSP-1.0:1:22466601:22472572:1 gene:Os01g0580200 transcript:Os01t0580200-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:BETA-GALACTOSIDASE 3 description:Similar to Beta-galactosidase precursor (EC 3.2.1.23) (Lactase). (Os01t0580200-01)
Sequence	MAASAVAVAFVVAVAAVLAAAASAAVTYDRKAVVVNGQRRILISGSIHYPRSTPEMWPDL IEKAKDGGLDVVQTYVFWNGHEPSPGQYYFEGRYDLVHFIKLVKQAGLYVNLRIGPYVCA EWNFGGFPVWLKYVPGISFRTDNEPFKAEMQKFTTKIVEMMKSEGLFEWQGGPIILSQIE NEFGPLEWDQGEPAKAYASWAANMAVALNTSVPWIMCKEDDAPDPIINTCNGFYCDWFSP NKPHKPTMWTEAWTAWYTGFGIPVPHRPVEDLAYGVAKFIQKGGSFVNYYMYHGGTNFGR TAGGPFIATSYDYDAPIDEYGLLREPKWGHLKQLHKAIKLCEPALVAGDPIVTSLGNAQK SSVFRSSTGACAAFLENKDKVSYARVAFNGMHYDLPPWSISILPDCKTTVFNTARVGSQI SQMKMEWAGGFAWQSYNEEINSFGEDPLTTVGLLEQINVTRDNTDYLWYTTYVDVAQDEQ FLSNGENLKLTVMSAGHALHIFINGQLKGTVYGSVDDPKLTYTGNVKLWAGSNTISCLSI AVGLPNVGEHFETWNAGILGPVTLDGLNEGRRDLTWQKWTYQVGLKGESMSLHSLSGSST VEWGEPVQKQPLTWYKAFFNAPDGDEPLALDMSSMGKGQIWINGQGIGRYWPGYKASGNC GTCDYRGEYDETKCQTNCGDSSQRWYHVPRSWLSPTGNLLVIFEEWGGDPTGISMVKRSI GSVCADVSEWQPSMKNWHTKDYEKAKVHLQCDNGQKITEIKFASFGTPQGSCGSYTEGGC HAHKSYDIFWKNCVGQERCGVSVVPEIFGGDPCPGTMKRAVVEAICG

Transcript Sequence

Transcript ID	Os01t0580200-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:1:22466601:22472572:1 gene:Os01g0580200 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:BETA-GALACTOSIDASE 3 description:Similar to Beta-galactosidase precursor (EC 3.2.1.23) (Lactase). (Os01t0580200-01)
Sequence	ACTCTCTCCGGTGGAGGGAAAAGCACCGAAAAGCGCGGCCTTTTTTTCTTCTTTTTTTCC CTCCCTTGTTCTTCCCCACACTCCACTCCACTCCTCGCATCGCATCCCATCCATGGCCGC CTCCGCCGTCGCCGTCGCGTTCGTCGTGGCGGTGGCCGCCGTGCTGGCCGCGGCGGCGTC CGCGGCCGTGACGTACGACCGGAAGGCTGTGGTGGTGAACGGGCAGCGGAGGATCCTCAT CTCCGGCTCCATCCACTACCCGAGGAGCACCCCCGAGATGTGGCCGGATCTGATAGAGAA GGCCAAGGACGGCGGCCTCGACGTGGTGCAGACGTACGTCTTCTGGAACGGCCACGAGCC GTCCCCCGGCCAGTACTACTTCGAGGGGAGGTATGATCTGGTGCACTTCATCAAGCTGGT GAAGCAGGCCGGCCTCTACGTGAACCTCCGCATTGGCCCCTACGTCTGCGCCGAGTGGAA CTTCGGTGGGTTCCCTGTTTGGCTCAAGTATGTCCCCGGCATCAGCTTTAGGACTGATAA TGAGCCGTTCAAGGCTGAGATGCAGAAGTTCACCACAAAGATCGTCGAAATGATGAAGTC GGAAGGGCTCTTTGAATGGCAAGGAGGGCCTATAATCCTCTCCCAGATAGAGAACGAGTT TGGGCCCTTGGAGTGGGATCAAGGTGAGCCTGCCAAGGCATATGCATCATGGGCAGCTAA CATGGCAGTTGCGCTCAACACCAGTGTGCCATGGATCATGTGCAAAGAAGATGATGCCCC TGATCCAATTATTAATACATGCAATGGATTTTACTGTGATTGGTTCTCCCCAAATAAACC TCACAAACCTACCATGTGGACTGAAGCCTGGACTGCTTGGTATACAGGCTTTGGTATTCC AGTTCCACATAGACCAGTAGAGGATCTAGCATATGGTGTCGCCAAGTTTATCCAGAAGGG TGGCTCTTTTGTGAATTATTACATGTATCATGGTGGAACAAACTTTGGACGCACAGCTGG TGGCCCATTCATTGCCACTAGTTATGACTATGATGCTCCTATTGATGAATATGGTTTGTT GAGAGAACCAAAATGGGGCCACTTGAAGCAGTTGCATAAAGCCATAAAACTTTGTGAACC TGCCTTGGTTGCAGGAGACCCCATTGTAACTTCACTTGGAAATGCTCAGAAGTCATCAGT TTTTAGATCAAGCACAGGAGCTTGTGCAGCTTTCCTTGAGAACAAGGATAAAGTATCTTA TGCAAGGGTAGCATTTAATGGCATGCACTATGACCTGCCTCCGTGGTCCATAAGTATTCT CCCAGACTGCAAAACGACAGTCTTCAATACTGCTAGGGTGGGAAGTCAGATTTCACAGAT GAAAATGGAATGGGCTGGAGGATTTGCATGGCAATCATACAACGAGGAGATAAATTCCTT TGGTGAGGATCCACTTACAACAGTAGGATTACTGGAACAAATAAATGTGACGAGGGATAA CACAGACTACTTATGGTATACCACATATGTCGATGTTGCCCAGGATGAGCAGTTCCTTAG CAATGGGGAGAATCTCAAGCTTACTGTGATGTCAGCTGGTCATGCTTTGCATATTTTCAT TAATGGACAACTGAAAGGAACTGTTTATGGCAGCGTAGATGACCCAAAACTGACTTATAC TGGGAATGTGAAGCTCTGGGCAGGCAGCAATACAATTTCCTGCTTAAGTATAGCAGTTGG CCTCCCAAATGTGGGAGAACATTTTGAGACTTGGAATGCTGGGATTCTTGGCCCAGTGAC GCTTGATGGCCTGAATGAGGGAAGAAGGGATCTGACATGGCAGAAATGGACTTATCAGGT AGGACTGAAAGGTGAGTCTATGAGTCTTCATTCACTCAGTGGAAGCTCAACAGTGGAGTG GGGAGAACCTGTGCAGAAGCAGCCTCTAACATGGTACAAGGCTTTTTTCAATGCACCGGA TGGTGATGAGCCATTAGCTTTGGACATGAGTAGTATGGGGAAGGGGCAAATCTGGATAAA TGGACAAGGTATTGGGCGATATTGGCCTGGCTACAAGGCTTCTGGAAACTGTGGAACCTG TGATTATCGAGGTGAATACGATGAAACGAAGTGTCAAACCAACTGTGGTGACTCTTCTCA GAGATGGTACCATGTTCCTCGTTCATGGCTTAGTCCCACAGGAAACCTTTTGGTCATATT CGAGGAGTGGGGTGGTGACCCTACTGGAATCTCAATGGTCAAAAGAAGCATCGGAAGTGT CTGCGCTGATGTGTCCGAATGGCAGCCATCAATGAAGAACTGGCATACAAAAGACTACGA GAAAGCAAAAGTCCACCTCCAATGTGACAATGGACAGAAGATAACTGAAATAAAATTTGC TAGCTTTGGCACACCACAGGGCTCCTGTGGAAGCTACACCGAAGGAGGCTGCCATGCGCA CAAGTCGTACGACATATTTTGGAAGAACTGCGTCGGTCAAGAACGCTGCGGGGTAAGCGT TGTTCCAGAAATATTTGGTGGAGATCCATGCCCAGGGACAATGAAACGGGCTGTTGTTGA GGCTATATGCGGTTGAGAACCGCAAACTCAGATCCTCCCAAATCATCCTATATCTTAGTT TCGACACGGTTTTCGGCTTACCGACCTTCTGGCAAGAGGTGAAAGTCACAGCAACAGTGA CGCACGGACCGTCAGAAGTTACAGAAAATTTAGTTGTAATTGAAGCATCAGTGTATGTAC ATTATTCTACATAGAAATTCACTGGGAAGGAAAGATTCAGGACTCTGCAGTGCAGGAATG GGAAACCAAGGGGCTGTATGTATGGTCCTCTGGACAGTATTGGTTTTTGGCTGGGGAAGG GCGCATAGGAGACTCTGCTGATACATGAGTCCATATGCGCAATGGCTTTTGCATATTGGA TTGGAGGATCAACTCTGTTTCATACGTGATGTGATGATTCATTTTTAAGCTCACTGAAAA CTACTGCAATGTAATGCTGGTAATGTGCAGGGTCCATCATTGATGTATTAAATTGTCCTC TTAATTAGCTAATTAGCAATGTACTACCTTTTCAGCTTATAAATAAATCTGCTGTATGTT ATTCAACCGTATGTGAATGAATTCTCTCAGGTGGTCATCTCAATGCCCACTTGATGATTA ATCTG