Plant GARDEN
How To ▶︎

JA

EN

TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

Search

By Species By Keywords Genes By Markers By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only) Sequences Other Tools

Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os01t0580100-03
CDS Infomation

cds chromosome:IRGSP-1.0:1:22450589:22455555:1 gene:Os01g0580100 gene_biotype:protein_coding transcript_biotype:protein_coding description:Alg9-like mannosyltransferase family protein. (Os01t0580100-01);Similar to Dolichyl-phosphate-mannose--glycolipid alpha-mannosyltransferase-like protein. (Os01t0580100-02);Alg9-like mannosyltransferase family protein. (Os01t0580100-03)
Sequence

ATGAGCCACCGCAGGCGACGTAACGCCGCTGGCCCGCCGCCTCCCGAAGGCATCGGCGGC
TCGTCCACCGCAGAGGCCTCTTCGACGGGGGAGGAGAGGCCGGATCTGCCGTGGGCGTGG
GCGCTGGGATCGGAGCGAAGGGTGCTCGCGCTGGCGCTGGCCTTCCGCGCGGCGAACGCG
CTGCTGGTGCGCACCTACTTCAACCCCGACGAGCACTGGCAGTGCCTCGAGGTCGCCCAC
CGCATCGTCTTCGGGTATGGCCACCTTACTTGGGAGTGGAAGCGTGGTCTTCGAAGTTAC
CTCCACCCCTTCATCTTTGCTGCTCTCTACAAGATTCTTTCGCTGCTCCACTTGGATTCC
CCATGGTTCATGGCGATGGCTCCACGTCTTCTACAATCAGTCTTTGCATCTTTTGGGGAT
CTCTACTTATATAAACTTTCAAAACTCATTTTCAATAATCACGTTGCCCAGTGGGCACTA
TTTTCACAGCTTGTTAACTGGTTCATGTTCTTCTGTATTACACGGACTCTCTCAAACAGC
ATGGAGACAGTTTTGACTGTTACTGGACTTTACTATTGGTTTGTTGCAATAGAGTCTGTA
AAGGGAAATTCGGTTGTTTCAAAGCAGCAGGCTGCCAGCAAGCAAAGCCCTCCATCAAGA
AAAATGGCTCTACTCATAGCAGCCTTAGCTTGTGCTATTCGGCCAACAAGTGCCATAACA
TGGCTATATGTTGGTCTTTTGGATTTTATTCAGATGAAATCAAAATCCCGGTTTATTTTT
CTCGAGGTCGTTCCGCTCGGGGTCTTTGTCCTTGCCGTGACAACGTTTCTTGATTGTTGG
ATGTATGGTTCCCGGATCATAGTGCCACTTAATTTTTTGAAATTTAACCTCTTCTCTTCA
GGAGGAGACTACTATGGAACACATGTGTTCCACTGGTACTTCAGCCAAGGTTTTCCATCG
ATGATTTGGACTTTCTTACCGTTTTCCATTTCTGGAATTTTGAAGTCTCGAGAATGGAGG
CTTGCAGGTCTTATTGTCTGGGTATTAGTGGTTTATAGCATACTTGGACATAAAGAATTC
AGGTTTGTTCTCCCGGTGCTTCCTTTTATGTTCATGTTCTCAGGACATAACTTAGCTGCA
ATGGCACAACTCAAGGGAAAAGGTCACAATGAGAAAGGACGACTTTCGAGGTTGAAGCTC
TCTGTCATTCTGCTCATCCTAACAAATGTTCCAATGGCTTTATATATGTCCTTATACCAT
CAAAGAGGAACTGAAGATGCTATGCTTTATCTATCACGAGAAGCCCATGATGGAAGAGTA
AAGAGTGTCCTCTTCCTTATGCCTTGCCATTCGACACCTTATTACTCTACATTACATTAC
AACCTACCTATGCGCTTTTTGGACTGTACTCCTAGTGAAAACAAAGGGACCTTGGATGAG
TCAGACCGTTTCCTCATGAACCCAGCAGATTTTGTGGGCGAGGTTTTTGGAAATTTATCT
TCGTTCAGTCATATTGTATTATTTGAATCTGAAGAAAGGCATGTCAAGTTGCTTCTGCGC
AATTCATTTCAAGAGGTTAGGAGATTTTTTCACTCCCACTTCAAGGTTGATAGAGACCTT
CAATCGTCAGTTGTTGTTTATTCACAGAAGAGTGTATTGTGA

Peptide Sequence

PEP ID

Os01t0580100-03
PEP Infomation

pep chromosome:IRGSP-1.0:1:22450589:22455555:1 gene:Os01g0580100 transcript:Os01t0580100-03 gene_biotype:protein_coding transcript_biotype:protein_coding description:Alg9-like mannosyltransferase family protein. (Os01t0580100-01);Similar to Dolichyl-phosphate-mannose--glycolipid alpha-mannosyltransferase-like protein. (Os01t0580100-02);Alg9-like mannosyltransferase family protein. (Os01t0580100-03)
Sequence

MSHRRRRNAAGPPPPEGIGGSSTAEASSTGEERPDLPWAWALGSERRVLALALAFRAANA
LLVRTYFNPDEHWQCLEVAHRIVFGYGHLTWEWKRGLRSYLHPFIFAALYKILSLLHLDS
PWFMAMAPRLLQSVFASFGDLYLYKLSKLIFNNHVAQWALFSQLVNWFMFFCITRTLSNS
METVLTVTGLYYWFVAIESVKGNSVVSKQQAASKQSPPSRKMALLIAALACAIRPTSAIT
WLYVGLLDFIQMKSKSRFIFLEVVPLGVFVLAVTTFLDCWMYGSRIIVPLNFLKFNLFSS
GGDYYGTHVFHWYFSQGFPSMIWTFLPFSISGILKSREWRLAGLIVWVLVVYSILGHKEF
RFVLPVLPFMFMFSGHNLAAMAQLKGKGHNEKGRLSRLKLSVILLILTNVPMALYMSLYH
QRGTEDAMLYLSREAHDGRVKSVLFLMPCHSTPYYSTLHYNLPMRFLDCTPSENKGTLDE
SDRFLMNPADFVGEVFGNLSSFSHIVLFESEERHVKLLLRNSFQEVRRFFHSHFKVDRDL
QSSVVVYSQKSVL

Transcript Sequence

Transcript ID

Os01t0580100-03
Transcript Infomation

cdna chromosome:IRGSP-1.0:1:22450589:22455555:1 gene:Os01g0580100 gene_biotype:protein_coding transcript_biotype:protein_coding description:Alg9-like mannosyltransferase family protein. (Os01t0580100-01);Similar to Dolichyl-phosphate-mannose--glycolipid alpha-mannosyltransferase-like protein. (Os01t0580100-02);Alg9-like mannosyltransferase family protein. (Os01t0580100-03)
Sequence

GACGGCGACGGCTGCGCCTCCTCCTCGTCCTCCTTCCACTCCCCATCGCTAGCCTTGCGC
TAGACAAAGCGCGGAAGGTGGTGGCTGCCTCGCTGCAAATGAGCCACCGCAGGCGACGTA
ACGCCGCTGGCCCGCCGCCTCCCGAAGGCATCGGCGGCTCGTCCACCGCAGAGGCCTCTT
CGACGGGGGAGGAGAGGCCGGATCTGCCGTGGGCGTGGGCGCTGGGATCGGAGCGAAGGG
TGCTCGCGCTGGCGCTGGCCTTCCGCGCGGCGAACGCGCTGCTGGTGCGCACCTACTTCA
ACCCCGACGAGCACTGGCAGTGCCTCGAGGTCGCCCACCGCATCGTCTTCGGGTATGGCC
ACCTTACTTGGGAGTGGAAGCGTGGTCTTCGAAGTTACCTCCACCCCTTCATCTTTGCTG
CTCTCTACAAGATTCTTTCGCTGCTCCACTTGGATTCCCCATGGTTCATGGCGATGGCTC
CACGTCTTCTACAATCAGTCTTTGCATCTTTTGGGGATCTCTACTTATATAAACTTTCAA
AACTCATTTTCAATAATCACGTTGCCCAGTGGGCACTATTTTCACAGCTTGTTAACTGGT
TCATGTTCTTCTGTATTACACGGACTCTCTCAAACAGCATGGAGACAGTTTTGACTGTTA
CTGGACTTTACTATTGGTTTGTTGCAATAGAGTCTGTAAAGGGAAATTCGGTTGTTTCAA
AGCAGCAGGCTGCCAGCAAGCAAAGCCCTCCATCAAGAAAAATGGCTCTACTCATAGCAG
CCTTAGCTTGTGCTATTCGGCCAACAAGTGCCATAACATGGCTATATGTTGGTCTTTTGG
ATTTTATTCAGATGAAATCAAAATCCCGGTTTATTTTTCTCGAGGTCGTTCCGCTCGGGG
TCTTTGTCCTTGCCGTGACAACGTTTCTTGATTGTTGGATGTATGGTTCCCGGATCATAG
TGCCACTTAATTTTTTGAAATTTAACCTCTTCTCTTCAGGAGGAGACTACTATGGAACAC
ATGTGTTCCACTGGTACTTCAGCCAAGGTTTTCCATCGATGATTTGGACTTTCTTACCGT
TTTCCATTTCTGGAATTTTGAAGTCTCGAGAATGGAGGCTTGCAGGTCTTATTGTCTGGG
TATTAGTGGTTTATAGCATACTTGGACATAAAGAATTCAGGTTTGTTCTCCCGGTGCTTC
CTTTTATGTTCATGTTCTCAGGACATAACTTAGCTGCAATGGCACAACTCAAGGGAAAAG
GTCACAATGAGAAAGGACGACTTTCGAGGTTGAAGCTCTCTGTCATTCTGCTCATCCTAA
CAAATGTTCCAATGGCTTTATATATGTCCTTATACCATCAAAGAGGAACTGAAGATGCTA
TGCTTTATCTATCACGAGAAGCCCATGATGGAAGAGTAAAGAGTGTCCTCTTCCTTATGC
CTTGCCATTCGACACCTTATTACTCTACATTACATTACAACCTACCTATGCGCTTTTTGG
ACTGTACTCCTAGTGAAAACAAAGGGACCTTGGATGAGTCAGACCGTTTCCTCATGAACC
CAGCAGATTTTGTGGGCGAGGTTTTTGGAAATTTATCTTCGTTCAGTCATATTGTATTAT
TTGAATCTGAAGAAAGGCATGTCAAGTTGCTTCTGCGCAATTCATTTCAAGAGGTTAGGA
GATTTTTTCACTCCCACTTCAAGGTTGATAGAGACCTTCAATCGTCAGTTGTTGTTTATT
CACAGAAGAGTGTATTGTGATCACTGTGGCAGAAAAGGCTCGTTAGTGTACTATCTTGTC
TAACATTTCTAATCATGTTTCACCCTACTTTAATTTATCATTCGAGAAATGATCTATAGT
TTGGGCCTTTATTTTGATATATTGATTTTTTCCCATCCTTTGTGATGTAATTCTATTTCT
ATGTATTAGCGCCAACTTCCATGTTTTCACAAAAAAAAAATCATTTCCATAACTAGAGGT
GTGAAGAAGTTTTAGAGGTTTAACAAAACGAAGACAAGAGACGAGCAGAGCTCCTCTTCT
AGAGAAACTGGCGCCATCCCAACCAGCTCTTCAGGAACAAGTTCCATTCCATCCATCTCA
ACCAAGTTTCAAAAGTGAGCAAGTAACAAAGAGGCAAAAGGTGGTTGTTTTCCAGGAACT
CTTCATAGTCTCCAACAGTCCAACTCTCCATCTTGACCTCCCAGCATCTTTCCAATCTTC
CTCTGCATCACTGAAGTCATCCACTTCCAGTATTGAAGTGCCAACTATGTCTTTCTCTGA
AGATCTTCCATGGTGAAAGTAGGACAAACCATCAGGCAAAACAAAAAGGGGACAGATCAT
TCCATGGCAAATCTTTGTGCGGACATACTGAACCTCATAAAATCATGTCAAATGTAAGTT
AAAATCATGTCAAATGTAAGTTCTCATTGATTTCCTGTAGTTTTTATTGTTGAACATGAA
CGATACATTTTTACAAGATATTTATGTCAGGAAATGCTAATCGAAACTCTGCT