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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os01t0579800-01
CDS Infomation

cds chromosome:IRGSP-1.0:1:22436022:22438392:1 gene:Os01g0579800 gene_biotype:protein_coding transcript_biotype:protein_coding description:Conserved hypothetical protein. (Os01t0579800-01)
Sequence

ATGGCCGACGCCGGCAAGCCCGACCCCGCGTCGCCGCCGGAGGCGCCGTCGGCGAAGAAG
GGGGTCTTCATGCGCCGCATCTTCCCGTTCCTCCTCGCCGCCAACATCTTCATCGGAGTT
TACGTATTTGCAAAGACCTACAAGAGAGACCAGGAAAAGAAGAACGCTCAGACTGCTGCT
GCTGCAGCTGCAGTTGTAGCATTGTCATCCCCAGCTGCCCCAGCTGCTGAGACTGTAGAT
CCTACTCCTCCAACTCCTCCACCCAAAAGAGTGCTTCCACCAATACCCGAAGACGAACAG
CGCCAGGTCTACAAGTGGATGCTGGAAGAGAAGCGGAAGATCAAGCCACGCAATGCTGCT
GAGAAGAACAAGATCAACGAAGAGAAGGCGCTTCTCAAGGAGTTCATCAGGGCAGAGTCT
CTTCCCCGTTTGTGA

Peptide Sequence

PEP ID

Os01t0579800-01
PEP Infomation

pep chromosome:IRGSP-1.0:1:22436022:22438392:1 gene:Os01g0579800 transcript:Os01t0579800-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Conserved hypothetical protein. (Os01t0579800-01)
Sequence

MADAGKPDPASPPEAPSAKKGVFMRRIFPFLLAANIFIGVYVFAKTYKRDQEKKNAQTAA
AAAAVVALSSPAAPAAETVDPTPPTPPPKRVLPPIPEDEQRQVYKWMLEEKRKIKPRNAA
EKNKINEEKALLKEFIRAESLPRL

Transcript Sequence

Transcript ID

Os01t0579800-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:1:22436022:22438392:1 gene:Os01g0579800 gene_biotype:protein_coding transcript_biotype:protein_coding description:Conserved hypothetical protein. (Os01t0579800-01)
Sequence

GTCTCAGCCGCCGCGCCGCCCCCCCGTCGACCGCGATCTTCCAGTCCGCACCCCGCCGCG
ATGGCCGACGCCGGCAAGCCCGACCCCGCGTCGCCGCCGGAGGCGCCGTCGGCGAAGAAG
GGGGTCTTCATGCGCCGCATCTTCCCGTTCCTCCTCGCCGCCAACATCTTCATCGGAGTT
TACGTATTTGCAAAGACCTACAAGAGAGACCAGGAAAAGAAGAACGCTCAGACTGCTGCT
GCTGCAGCTGCAGTTGTAGCATTGTCATCCCCAGCTGCCCCAGCTGCTGAGACTGTAGAT
CCTACTCCTCCAACTCCTCCACCCAAAAGAGTGCTTCCACCAATACCCGAAGACGAACAG
CGCCAGGTCTACAAGTGGATGCTGGAAGAGAAGCGGAAGATCAAGCCACGCAATGCTGCT
GAGAAGAACAAGATCAACGAAGAGAAGGCGCTTCTCAAGGAGTTCATCAGGGCAGAGTCT
CTTCCCCGTTTGTGATTAGCATTTCACTGGCTGCCCTGCTGGCCTTGTTTTTTTTTTTCT
TTTGCCTGCTGTTCCATGGAAGGACATGTTCTGGATTTTACACTTGTCTCTTGTTTGTTG
GCAGAAACGGTAGCATTTTGTATGGTGTCAAGTAATCATTTGTTACCCAAAATACTGAGT
CAAGTGGCTCCAGTTTCAGGGAACTCTGGCATTTTAACATC