Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os01t0578800-01
CDS Infomation

cds chromosome:IRGSP-1.0:1:22385203:22386611:1 gene:Os01g0578800 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:Os_F0791 description:Conserved hypothetical protein. (Os01t0578800-01)
Sequence

TGCGACAACATGGTGGAGGAGATCCTCGTCCGCCTACCGGAGGAGCAGCACCTCCGCCGC
GCCAGCGCCGCCTGCCGCCGCTACGGCGACATCATCCGCCGCCCCGGCTTCGCCACCCGC
CACCGGGAGCTGCACTCGCCGCTCCTCTCCGGCGGCGTCGTCCTCCACGGCGTGCGGCGC
CGCTGCCCCCGCGTGGACGGCACCGCAGCCCACGTCCGCGGATCCTACGCCTTCTTCCTC
CCCGCCGGCGCCGGCGACGCCTCCGCGTCTTCCTCCTTGGAGTTGGACCTCGCCGGCCTC
TTGCCTAGCCCCACCGACAGGGAGCTGGCCTACCTGCTCAGCACCGGCGCCGCCGATCCG
GACGCCGCCCGCAGGAGCGTCTTCATCGTGCACTCGTCGTCGTCGGCCGGCCTGCTGCTG
TGCTGCCGAGGCTATGTCAACCCGGTGCATTACTACGTCTGCGACCCGGTGGCTCGCCGG
TGCGTGGCCCTCCCGGAGCTGCCATGGCCGCCCGCCTTCGACAAGTCCGGCATGCTCTCG
GTGGCTGCCGGCGGCGGCGGCGGCTTCCAAGTGGTCCTCTTTGAAAAGAGGGGCTTCGCG
CATGGTGGAGGGCACCTAGACCTCGAGGTTTTCTCCTCGGACTCCGGCGAGTGGGCGGCG
ATGCGCATCCCTCGCCCGCAGGACCTCGCCGGGTTCCGGTGCTTCGCGCCGCCGCACCTC
CGGCACGACGGCGCCGCGGCGTACTGGCTCGGGTTCGAGCCCAGGGACCGGGCCGTGGTG
TACGGCGCCGCGGACCACTCCATCCGCCTCATCCCGGTGCCACGCCGCGTCCACGACCCC
AGCGCGCTCAACCGGTTCGTCGGGGAGCGGCGCGGCGGCGCGCTCCTCCGGTACGCGCAC
TTCGACGCGGCAGAGTTCGAGGTGTGGGACACGGACGACGCCACGCCGACGCGGTGGGCG
CTGGTGCACCGGGCGGCGCTCAAGGACGTGGTGGCCCGCAGCCCCCGGGCGGTGGCCGCC
AAATTCGTGCACGGTCGCATCGTCCGGCACATCCACCACCACGACGCGAACTGGAACTGG
TGCTCCTCCTTCAAGCTCATCGGCTTCGACCCGGTCCACGACGACGACGTCTTCTTGTTC
GGGGCGACCAATGGTAGTGGATGCGTCGCCGCCTACTCCCTCACGCTCGGCAAGCTGAGC
CTCCGCTGCAAGATTGACACTGCCGACGGCTCGTCCTCCTTGTGCGGCTGTGACATGTTC
CCGTACGTACGCGCGTCCACCACCTCGCCCCGTGCGGACATACCAGGCATGGTGTATACC
AATGCCTAG

Peptide Sequence

PEP ID

Os01t0578800-01
PEP Infomation

pep chromosome:IRGSP-1.0:1:22385203:22386611:1 gene:Os01g0578800 transcript:Os01t0578800-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:Os_F0791 description:Conserved hypothetical protein. (Os01t0578800-01)
Sequence

CDNMVEEILVRLPEEQHLRRASAACRRYGDIIRRPGFATRHRELHSPLLSGGVVLHGVRR
RCPRVDGTAAHVRGSYAFFLPAGAGDASASSSLELDLAGLLPSPTDRELAYLLSTGAADP
DAARRSVFIVHSSSSAGLLLCCRGYVNPVHYYVCDPVARRCVALPELPWPPAFDKSGMLS
VAAGGGGGFQVVLFEKRGFAHGGGHLDLEVFSSDSGEWAAMRIPRPQDLAGFRCFAPPHL
RHDGAAAYWLGFEPRDRAVVYGAADHSIRLIPVPRRVHDPSALNRFVGERRGGALLRYAH
FDAAEFEVWDTDDATPTRWALVHRAALKDVVARSPRAVAAKFVHGRIVRHIHHHDANWNW
CSSFKLIGFDPVHDDDVFLFGATNGSGCVAAYSLTLGKLSLRCKIDTADGSSSLCGCDMF
PYVRASTTSPRADIPGMVYTNA

Transcript Sequence

Transcript ID

Os01t0578800-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:1:22385203:22386611:1 gene:Os01g0578800 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:Os_F0791 description:Conserved hypothetical protein. (Os01t0578800-01)
Sequence

GTGCGACAACATGGTGGAGGAGATCCTCGTCCGCCTACCGGAGGAGCAGCACCTCCGCCG
CGCCAGCGCCGCCTGCCGCCGCTACGGCGACATCATCCGCCGCCCCGGCTTCGCCACCCG
CCACCGGGAGCTGCACTCGCCGCTCCTCTCCGGCGGCGTCGTCCTCCACGGCGTGCGGCG
CCGCTGCCCCCGCGTGGACGGCACCGCAGCCCACGTCCGCGGATCCTACGCCTTCTTCCT
CCCCGCCGGCGCCGGCGACGCCTCCGCGTCTTCCTCCTTGGAGTTGGACCTCGCCGGCCT
CTTGCCTAGCCCCACCGACAGGGAGCTGGCCTACCTGCTCAGCACCGGCGCCGCCGATCC
GGACGCCGCCCGCAGGAGCGTCTTCATCGTGCACTCGTCGTCGTCGGCCGGCCTGCTGCT
GTGCTGCCGAGGCTATGTCAACCCGGTGCATTACTACGTCTGCGACCCGGTGGCTCGCCG
GTGCGTGGCCCTCCCGGAGCTGCCATGGCCGCCCGCCTTCGACAAGTCCGGCATGCTCTC
GGTGGCTGCCGGCGGCGGCGGCGGCTTCCAAGTGGTCCTCTTTGAAAAGAGGGGCTTCGC
GCATGGTGGAGGGCACCTAGACCTCGAGGTTTTCTCCTCGGACTCCGGCGAGTGGGCGGC
GATGCGCATCCCTCGCCCGCAGGACCTCGCCGGGTTCCGGTGCTTCGCGCCGCCGCACCT
CCGGCACGACGGCGCCGCGGCGTACTGGCTCGGGTTCGAGCCCAGGGACCGGGCCGTGGT
GTACGGCGCCGCGGACCACTCCATCCGCCTCATCCCGGTGCCACGCCGCGTCCACGACCC
CAGCGCGCTCAACCGGTTCGTCGGGGAGCGGCGCGGCGGCGCGCTCCTCCGGTACGCGCA
CTTCGACGCGGCAGAGTTCGAGGTGTGGGACACGGACGACGCCACGCCGACGCGGTGGGC
GCTGGTGCACCGGGCGGCGCTCAAGGACGTGGTGGCCCGCAGCCCCCGGGCGGTGGCCGC
CAAATTCGTGCACGGTCGCATCGTCCGGCACATCCACCACCACGACGCGAACTGGAACTG
GTGCTCCTCCTTCAAGCTCATCGGCTTCGACCCGGTCCACGACGACGACGTCTTCTTGTT
CGGGGCGACCAATGGTAGTGGATGCGTCGCCGCCTACTCCCTCACGCTCGGCAAGCTGAG
CCTCCGCTGCAAGATTGACACTGCCGACGGCTCGTCCTCCTTGTGCGGCTGTGACATGTT
CCCGTACGTACGCGCGTCCACCACCTCGCCCCGTGCGGACATACCAGGCATGGTGTATAC
CAATGCCTAGAGTGGAATATATATCATGCATGTTTGTACACCAGCGTGTAGGTTCATAAA
CTTGACATAATGAACTTCTCTTTAAACTT