Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os01t0578500-01
CDS Infomation	cds chromosome:IRGSP-1.0:1:22375575:22377307:1 gene:Os01g0578500 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:HYBRID STERILITY description:F-box protein, Indica-Japonica hybrid male sterility (Os01t0578500-01)
Sequence	ATGGAGGCGGTCATCGCGGAGTGCCGCCCCAAGCCTCTCTTCACCACCGGGCCCTTCCTC TCCGCCGTCGGCGGCGGCGGCGGCGGCGTCGACCGCATCTCCGGGCTCCCCGACGACCTC CTCTTTGTCATCCTCTCCAAGCTCCCCGTCAGGGATGCCGTGGCGACGTCCGCCCTCTCC CCCCGCTGGAAGAGCCTCTGGTCCAGCGTCCCGCTCCGCCTCGACGACGCCGGCCTCCTC CACCGCCGCGACGGCACGCGCCTCGGCCGGGAAGGCGTCGCCGCCACCGTCTCCGCCGTC CTCGCCGCCCACCCAGGCCCCGTGCCCGCGGCCTCCGTTGGGTGCTGCCTCTCCTCCGAC GACCAGGGCTACCAGCTGGGAGGCTGGCTCCGAGCCCTCGCCGCCAAGGGCGTTCGGCAA CTGTGCCTGATGGGCGCGCCATGGTCGCCGCGCGCTGCTCTCCCCTCCGCTGTGTTCTCC TGCTCATCCCTGCGGCGCCTCTTCCTTGGTTCCGTGCAATGCAACTGGGACCTCATACCA GACCATGCCTGCTTCCCTGAGCTACGAGAGATCCAGATATGCAACGCCCTAATGAAGAGC CAGGATCTGTCCCTTGTTTTGGCTGTCTGCCCAGCGCTTGAGACAGTGGAGATTCTTGCG AGCCGTAACAAAATCCCCACCGTGCGAATGAGTAGCCATACTATCCGCAATACTTTGCTA TGGAAGTCGGTGGCCAAGGAAGTGAACGTTTTGGACACCCCTTGCCTCAGCAGGGTTGTT TTGTGGCAGGATCTTCTGCTGCCCCACTCAAGATATAATTCTAAGGTCACAATCAGCCGT GCCACCAAAATGCGCATTTCCGGTTACCTGGACACCGGCATCAACACTTTGGTGATCAAC GAAACCACAGTTAAGGTAAACACAAATATAAGCTTCAAGACACTTATCCCCAGCGTGAAG GTTTTGGGTCTCTCTGTTCATTTCGGAGTACGAAAGGAGGCTTTGATGTCCATCAGCTTC CTTAGGTGTTTTCCAGAGGTTGAGACACTACATATAACTAGCAAAACGGACAAGGCTTCA GAAGCCGAACAATTCAGTTTCTGGGGAAAGGTTGATCCTGTTGAGTGTGTGACCTCTCAT CTCAAGAAGTTAGTGTTCCATGGGATGCCATGGTGTCCTGGAAACCTTGAGTTTCTCAAA TTCATCGTGGAAGGGGCATACTTGCTAGAGAAGGTGTTGATTGTTCTTCCTAAAGGAACT TACACTAGCATGCATAGCGTTATCACCAAACTCAAGTTAGCACCTTTGACCTCTGCAAGT TGGGCTAGTCACATCTGTAAAATGGAGGTTGTCCAATCCAGTCAAGGAACTTTGAGCTAC CAAAGGGCATCTGATCATTCCGTCGATGATCCTTTAGATTATTCCCTGTAG

Peptide Sequence

PEP ID	Os01t0578500-01
PEP Infomation	pep chromosome:IRGSP-1.0:1:22375575:22377307:1 gene:Os01g0578500 transcript:Os01t0578500-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:HYBRID STERILITY description:F-box protein, Indica-Japonica hybrid male sterility (Os01t0578500-01)
Sequence	MEAVIAECRPKPLFTTGPFLSAVGGGGGGVDRISGLPDDLLFVILSKLPVRDAVATSALS PRWKSLWSSVPLRLDDAGLLHRRDGTRLGREGVAATVSAVLAAHPGPVPAASVGCCLSSD DQGYQLGGWLRALAAKGVRQLCLMGAPWSPRAALPSAVFSCSSLRRLFLGSVQCNWDLIP DHACFPELREIQICNALMKSQDLSLVLAVCPALETVEILASRNKIPTVRMSSHTIRNTLL WKSVAKEVNVLDTPCLSRVVLWQDLLLPHSRYNSKVTISRATKMRISGYLDTGINTLVIN ETTVKVNTNISFKTLIPSVKVLGLSVHFGVRKEALMSISFLRCFPEVETLHITSKTDKAS EAEQFSFWGKVDPVECVTSHLKKLVFHGMPWCPGNLEFLKFIVEGAYLLEKVLIVLPKGT YTSMHSVITKLKLAPLTSASWASHICKMEVVQSSQGTLSYQRASDHSVDDPLDYSL

Transcript Sequence

Transcript ID	Os01t0578500-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:1:22375575:22377307:1 gene:Os01g0578500 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:HYBRID STERILITY description:F-box protein, Indica-Japonica hybrid male sterility (Os01t0578500-01)
Sequence	ATGGAGGCGGTCATCGCGGAGTGCCGCCCCAAGCCTCTCTTCACCACCGGGCCCTTCCTC TCCGCCGTCGGCGGCGGCGGCGGCGGCGTCGACCGCATCTCCGGGCTCCCCGACGACCTC CTCTTTGTCATCCTCTCCAAGCTCCCCGTCAGGGATGCCGTGGCGACGTCCGCCCTCTCC CCCCGCTGGAAGAGCCTCTGGTCCAGCGTCCCGCTCCGCCTCGACGACGCCGGCCTCCTC CACCGCCGCGACGGCACGCGCCTCGGCCGGGAAGGCGTCGCCGCCACCGTCTCCGCCGTC CTCGCCGCCCACCCAGGCCCCGTGCCCGCGGCCTCCGTTGGGTGCTGCCTCTCCTCCGAC GACCAGGGCTACCAGCTGGGAGGCTGGCTCCGAGCCCTCGCCGCCAAGGGCGTTCGGCAA CTGTGCCTGATGGGCGCGCCATGGTCGCCGCGCGCTGCTCTCCCCTCCGCTGTGTTCTCC TGCTCATCCCTGCGGCGCCTCTTCCTTGGTTCCGTGCAATGCAACTGGGACCTCATACCA GACCATGCCTGCTTCCCTGAGCTACGAGAGATCCAGATATGCAACGCCCTAATGAAGAGC CAGGATCTGTCCCTTGTTTTGGCTGTCTGCCCAGCGCTTGAGACAGTGGAGATTCTTGCG AGCCGTAACAAAATCCCCACCGTGCGAATGAGTAGCCATACTATCCGCAATACTTTGCTA TGGAAGTCGGTGGCCAAGGAAGTGAACGTTTTGGACACCCCTTGCCTCAGCAGGGTTGTT TTGTGGCAGGATCTTCTGCTGCCCCACTCAAGATATAATTCTAAGGTCACAATCAGCCGT GCCACCAAAATGCGCATTTCCGGTTACCTGGACACCGGCATCAACACTTTGGTGATCAAC GAAACCACAGTTAAGGTAAACACAAATATAAGCTTCAAGACACTTATCCCCAGCGTGAAG GTTTTGGGTCTCTCTGTTCATTTCGGAGTACGAAAGGAGGCTTTGATGTCCATCAGCTTC CTTAGGTGTTTTCCAGAGGTTGAGACACTACATATAACTAGCAAAACGGACAAGGCTTCA GAAGCCGAACAATTCAGTTTCTGGGGAAAGGTTGATCCTGTTGAGTGTGTGACCTCTCAT CTCAAGAAGTTAGTGTTCCATGGGATGCCATGGTGTCCTGGAAACCTTGAGTTTCTCAAA TTCATCGTGGAAGGGGCATACTTGCTAGAGAAGGTGTTGATTGTTCTTCCTAAAGGAACT TACACTAGCATGCATAGCGTTATCACCAAACTCAAGTTAGCACCTTTGACCTCTGCAAGT TGGGCTAGTCACATCTGTAAAATGGAGGTTGTCCAATCCAGTCAAGGAACTTTGAGCTAC CAAAGGGCATCTGATCATTCCGTCGATGATCCTTTAGATTATTCCCTGTAG