Gene sequences

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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os01t0578000-01
CDS Infomation	cds chromosome:IRGSP-1.0:1:22353427:22358405:-1 gene:Os01g0578000 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:DNA REPAIR PROTEIN RAD51C description:DNA repair protein, DNA double-strand break repair, synaptonemal complex assembly (Os01t0578000-01);Splicing variant of DNA repair protein RAD51C (Os01t0578000-02);Splicing variant of DNA repair protein RAD51C (Os01t0578000-03)
Sequence	ATGGAGATCGCCGACCTCCCCATCGCCACCTCCCACCGCGCCAACCTCCTCGCCGCCGGC TACTCCTCCCTCGCCGCGCTCTCCGCCGCCTCCCCTCCCCGCCTCGCCCGAGATTTGAGC ATTGAGGTACATGAGGCTGAAGAAATCCTCAAGGTTGCCGTGGGCGCCAACAAGTCCAAG GGAGCAGATGGGCCTAGCACCAGCAGTGTTCTCAAAGGTGTGCAAAATGCATGGGATATG CTATCTGATGAGCAATCACGGAGGCACATCAATACTGGATCTGCTGACCTCAACAACATC CTTGGTGGAGGGATTCACTGTAAAGAGGTTACTGAGATTGGTGGTGTCCCAGGAGTCGGT AAAACTCAACTGGGGATTCAACTAGCAATCAATGTTCAAATTCCAGTGGAGTATGGTGGA CTTGGTGGGAAAGCTGTTTATATAGATACAGAGGGAAGTTTCATGGTTGAACGTGTCTAC CAAATTGCTGAAGGGTGCATCAGTGATATACTGGAGTACTTTCCACACTGCCATGACAAG GCTCCAGCCGGACAAGAAAAACTGAAGCCTGAGAGTTTCCTGGCTGACATCTACTACTTT CGAATATGCAGCTATACTGAACAAATTGCAGTCATAAACTATCTGGAAAAGTTTCTTGGG GAGCATAAAGATGTAAGAATAGTTATTATTGACAGCGTTACTTTCCACTTTCGGCAAGAT TTTGATGATATGGCACTAAGGACTAGAGTGCTTAGTGGATTATCATTGAAGTTGATGAAA CTTTCAAAGGCATATAACTTGGCGGTTGTCTTGTTGAACCAAGTTACTACTAAATTCACA GAAGGATCATTTCAGTTAACTCTTGCTCTAGGTGACAGTTGGTCCCACTCATGCACCAAT CGACTAATTCTGTATTGGAACGGCAATGAGCGGTATGGATTCCTGGACAAGTCCCCTTCA CTACCAGTAGCATCAGCACCATATGCAGTGACAGTTAAAGGGGTGAGAGATGCTGTGAAT TCAAACAGCAAGCGAGTCCGGGTAATGTAG

Peptide Sequence

PEP ID	Os01t0578000-01
PEP Infomation	pep chromosome:IRGSP-1.0:1:22353427:22358405:-1 gene:Os01g0578000 transcript:Os01t0578000-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:DNA REPAIR PROTEIN RAD51C description:DNA repair protein, DNA double-strand break repair, synaptonemal complex assembly (Os01t0578000-01);Splicing variant of DNA repair protein RAD51C (Os01t0578000-02);Splicing variant of DNA repair protein RAD51C (Os01t0578000-03)
Sequence	MEIADLPIATSHRANLLAAGYSSLAALSAASPPRLARDLSIEVHEAEEILKVAVGANKSK GADGPSTSSVLKGVQNAWDMLSDEQSRRHINTGSADLNNILGGGIHCKEVTEIGGVPGVG KTQLGIQLAINVQIPVEYGGLGGKAVYIDTEGSFMVERVYQIAEGCISDILEYFPHCHDK APAGQEKLKPESFLADIYYFRICSYTEQIAVINYLEKFLGEHKDVRIVIIDSVTFHFRQD FDDMALRTRVLSGLSLKLMKLSKAYNLAVVLLNQVTTKFTEGSFQLTLALGDSWSHSCTN RLILYWNGNERYGFLDKSPSLPVASAPYAVTVKGVRDAVNSNSKRVRVM

Transcript Sequence

Transcript ID	Os01t0578000-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:1:22353427:22358405:-1 gene:Os01g0578000 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:DNA REPAIR PROTEIN RAD51C description:DNA repair protein, DNA double-strand break repair, synaptonemal complex assembly (Os01t0578000-01);Splicing variant of DNA repair protein RAD51C (Os01t0578000-02);Splicing variant of DNA repair protein RAD51C (Os01t0578000-03)
Sequence	AAAAAAAAAAACCATCGCCAGTCGCCGCCCGCGCGGAGCATCCATCCTCAACCTCCCAAG TTCGGCGCCCAATCCCGGCGATGGAGATCGCCGACCTCCCCATCGCCACCTCCCACCGCG CCAACCTCCTCGCCGCCGGCTACTCCTCCCTCGCCGCGCTCTCCGCCGCCTCCCCTCCCC GCCTCGCCCGAGATTTGAGCATTGAGGTACATGAGGCTGAAGAAATCCTCAAGGTTGCCG TGGGCGCCAACAAGTCCAAGGGAGCAGATGGGCCTAGCACCAGCAGTGTTCTCAAAGGTG TGCAAAATGCATGGGATATGCTATCTGATGAGCAATCACGGAGGCACATCAATACTGGAT CTGCTGACCTCAACAACATCCTTGGTGGAGGGATTCACTGTAAAGAGGTTACTGAGATTG GTGGTGTCCCAGGAGTCGGTAAAACTCAACTGGGGATTCAACTAGCAATCAATGTTCAAA TTCCAGTGGAGTATGGTGGACTTGGTGGGAAAGCTGTTTATATAGATACAGAGGGAAGTT TCATGGTTGAACGTGTCTACCAAATTGCTGAAGGGTGCATCAGTGATATACTGGAGTACT TTCCACACTGCCATGACAAGGCTCCAGCCGGACAAGAAAAACTGAAGCCTGAGAGTTTCC TGGCTGACATCTACTACTTTCGAATATGCAGCTATACTGAACAAATTGCAGTCATAAACT ATCTGGAAAAGTTTCTTGGGGAGCATAAAGATGTAAGAATAGTTATTATTGACAGCGTTA CTTTCCACTTTCGGCAAGATTTTGATGATATGGCACTAAGGACTAGAGTGCTTAGTGGAT TATCATTGAAGTTGATGAAACTTTCAAAGGCATATAACTTGGCGGTTGTCTTGTTGAACC AAGTTACTACTAAATTCACAGAAGGATCATTTCAGTTAACTCTTGCTCTAGGTGACAGTT GGTCCCACTCATGCACCAATCGACTAATTCTGTATTGGAACGGCAATGAGCGGTATGGAT TCCTGGACAAGTCCCCTTCACTACCAGTAGCATCAGCACCATATGCAGTGACAGTTAAAG GGGTGAGAGATGCTGTGAATTCAAACAGCAAGCGAGTCCGGGTAATGTAGCAATCTTGGT GTTGAACCCTTTTACCATTAGTAGCCATCGACCGTCATGTCTAAACTGTGCAGCATTCTC TGATCTTTCTAACTAAGCTGATTGAAATTTGGATCATGTGTAACGCTGTCTTATTTGCTT CTGCCGGTAGCTAATTGTACAAAGGTAACTGAAGCAAAAGAGGGTGCTTCATTTTGGTTG ATCCAAACATGTAACAGCTAACAAGTACTCTACAGGCCTGTTACAAACTTACAAACAGAA TGATGCCGGATGTGTTCCGATGCCAGGAAATTATCCTCGTTTTTTC